Literature DB >> 22275097

Genome sequence of Enterobacter cloacae subsp. dissolvens SDM, an efficient biomass-utilizing producer of platform chemical 2,3-butanediol.

Youqiang Xu1, Ailong Wang, Fei Tao, Fei Su, Hongzhi Tang, Cuiqing Ma, Ping Xu.   

Abstract

Enterobacter cloacae subsp. dissolvens SDM has an extraordinary characteristic of biomass utilization for 2,3-butanediol production. Here we present a 4.9-Mb assembly of its genome. The key genes for regulation and metabolism of 2,3-butanediol production were annotated, which could provide further insights into the molecular mechanism of high-yield production of 2,3-butanediol.

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Year:  2012        PMID： 22275097      PMCID： PMC3272950          DOI： 10.1128/JB.06495-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  16 in total

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Review 3.  The path forward for biofuels and biomaterials.

Authors:  Arthur J Ragauskas; Charlotte K Williams; Brian H Davison; George Britovsek; John Cairney; Charles A Eckert; William J Frederick; Jason P Hallett; David J Leak; Charles L Liotta; Jonathan R Mielenz; Richard Murphy; Richard Templer; Timothy Tschaplinski
Journal:  Science       Date:  2006-01-27       Impact factor: 47.728

Review 4.  Raw materials.

Authors:  Dietmar Peters
Journal:  Adv Biochem Eng Biotechnol       Date:  2007       Impact factor: 2.635

5.  Enhanced 2,3-butanediol production by Klebsiella oxytoca using a two-stage agitation speed control strategy.

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Journal:  Bioresour Technol       Date:  2009-03-17       Impact factor: 9.642

6.  Enhanced 2,3-butanediol production by Klebsiella pneumoniae SDM.

Authors:  Cuiqing Ma; Ailong Wang; Jiayang Qin; Lixiang Li; Xulu Ai; Tianyi Jiang; Hongzhi Tang; Ping Xu
Journal:  Appl Microbiol Biotechnol       Date:  2008-10-24       Impact factor: 4.813

7.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

8.  Production of 2,3-butanediol by newly isolated Enterobacter cloacae.

Authors:  B C Saha; R J Bothast
Journal:  Appl Microbiol Biotechnol       Date:  1999-09       Impact factor: 4.813

9.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
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  10 in total

1.  Complete genome sequence of the endophytic Enterobacter cloacae subsp. cloacae strain ENHKU01.

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2.  New constitutive vectors: useful genetic engineering tools for biocatalysis.

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Journal:  Appl Environ Microbiol       Date:  2013-02-15       Impact factor: 4.792

3.  Reversible oxygen-tolerant hydrogenase carried by free-living N2-fixing bacteria isolated from the rhizospheres of rice, maize, and wheat.

Authors:  Philippe Roumagnac; Pierre Richaud; Mohamed Barakat; Philippe Ortet; Marie-Anne Roncato; Thierry Heulin; Gilles Peltier; Wafa Achouak; Laurent Cournac
Journal:  Microbiologyopen       Date:  2012-09-12       Impact factor: 3.139

4.  Complete Genome Sequence of Enterobacter sp. Strain R4-368, an Endophytic N-Fixing Gammaproteobacterium Isolated from Surface-Sterilized Roots of Jatropha curcas L.

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Journal:  Genome Announc       Date:  2013-08-01

5.  Aerobic bacterial flora of biotic and abiotic compartments of a hyperendemic Zoonotic Cutaneous Leishmaniasis (ZCL) focus.

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6.  Metabolic engineering of Zymomonas mobilis for 2,3-butanediol production from lignocellulosic biomass sugars.

Authors:  Shihui Yang; Ali Mohagheghi; Mary Ann Franden; Yat-Chen Chou; Xiaowen Chen; Nancy Dowe; Michael E Himmel; Min Zhang
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7.  Thermophilic fermentation of acetoin and 2,3-butanediol by a novel Geobacillus strain.

Authors:  Zijun Xiao; Xiangming Wang; Yunling Huang; Fangfang Huo; Xiankun Zhu; Lijun Xi; Jian R Lu
Journal:  Biotechnol Biofuels       Date:  2012-12-06       Impact factor: 6.040

8.  Comparative genome analysis of Enterobacter cloacae.

Authors:  Wing-Yee Liu; Chi-Fat Wong; Karl Ming-Kar Chung; Jing-Wei Jiang; Frederick Chi-Ching Leung
Journal:  PLoS One       Date:  2013-09-12       Impact factor: 3.240

9.  Efficient 2,3-butanediol production from cassava powder by a crop-biomass-utilizer, Enterobacter cloacae subsp. dissolvens SDM.

Authors:  Ailong Wang; Youqiang Xu; Cuiqing Ma; Chao Gao; Lixiang Li; Yu Wang; Fei Tao; Ping Xu
Journal:  PLoS One       Date:  2012-07-05       Impact factor: 3.240

10.  Production of diacetyl by metabolically engineered Enterobacter cloacae.

Authors:  Lijie Zhang; Yingxin Zhang; Qiuyuan Liu; Liying Meng; Mandong Hu; Min Lv; Kun Li; Chao Gao; Ping Xu; Cuiqing Ma
Journal:  Sci Rep       Date:  2015-03-12       Impact factor: 4.379
  10 in total

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