Literature DB >> 23045485

Complete genome sequence of the endophytic Enterobacter cloacae subsp. cloacae strain ENHKU01.

Wing-Yee Liu1, Karl Ming-Kar Chung, Chi-Fat Wong, Jing-Wei Jiang, Raymond Kin-Hi Hui, Frederick Chi-Ching Leung.   

Abstract

Enterobacter cloacae subsp. cloacae strain ENHKU01 is a Gram-negative endophyte isolated from a diseased pepper (Capsicum annuum) plant in Hong Kong. This is the first complete genome sequence report of a plant-endophytic strain of E. cloacae subsp. cloacae.

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Year:  2012        PMID: 23045485      PMCID: PMC3486125          DOI: 10.1128/JB.01394-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  11 in total

1.  BLAST: at the core of a powerful and diverse set of sequence analysis tools.

Authors:  Scott McGinnis; Thomas L Madden
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

2.  Genome sequence of Enterobacter cloacae subsp. dissolvens SDM, an efficient biomass-utilizing producer of platform chemical 2,3-butanediol.

Authors:  Youqiang Xu; Ailong Wang; Fei Tao; Fei Su; Hongzhi Tang; Cuiqing Ma; Ping Xu
Journal:  J Bacteriol       Date:  2012-02       Impact factor: 3.490

3.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

4.  Toward an online repository of Standard Operating Procedures (SOPs) for (meta)genomic annotation.

Authors:  Samuel V Angiuoli; Aaron Gussman; William Klimke; Guy Cochrane; Dawn Field; George Garrity; Chinnappa D Kodira; Nikos Kyrpides; Ramana Madupu; Victor Markowitz; Tatiana Tatusova; Nick Thomson; Owen White
Journal:  OMICS       Date:  2008-06

5.  Complete genome sequence of Enterobacter cloacae subsp. cloacae type strain ATCC 13047.

Authors:  Yan Ren; Yi Ren; Zhemin Zhou; Xi Guo; Yayue Li; Lu Feng; Lei Wang
Journal:  J Bacteriol       Date:  2010-03-05       Impact factor: 3.490

6.  Complete genome sequence of Enterobacter aerogenes KCTC 2190.

Authors:  Sang Heum Shin; Sewhan Kim; Jae Young Kim; Soojin Lee; Youngsoon Um; Min-Kyu Oh; Young-Rok Kim; Jinwon Lee; Kap-Seok Yang
Journal:  J Bacteriol       Date:  2012-05       Impact factor: 3.490

7.  Genome sequence of the plant growth promoting endophytic bacterium Enterobacter sp. 638.

Authors:  Safiyh Taghavi; Daniel van der Lelie; Adam Hoffman; Yian-Biao Zhang; Michael D Walla; Jaco Vangronsveld; Lee Newman; Sébastien Monchy
Journal:  PLoS Genet       Date:  2010-05-13       Impact factor: 5.917

8.  Complete genome sequence of "Enterobacter lignolyticus" SCF1.

Authors:  Kristen M Deangelis; Patrik D'Haeseleer; Dylan Chivian; Julian L Fortney; Jane Khudyakov; Blake Simmons; Hannah Woo; Adam P Arkin; Karen Walston Davenport; Lynne Goodwin; Amy Chen; Natalia Ivanova; Nikos C Kyrpides; Konstantinos Mavromatis; Tanja Woyke; Terry C Hazen
Journal:  Stand Genomic Sci       Date:  2011-09-23

9.  Complete genome of the onion pathogen Enterobacter cloacae EcWSU1.

Authors:  Jodi L Humann; Mark Wildung; Chun-Huai Cheng; Taein Lee; Jane E Stewart; Jennifer C Drew; Eric W Triplett; Doreen Main; Brenda K Schroeder
Journal:  Stand Genomic Sci       Date:  2011-12-22

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969

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  14 in total

1.  The whole-genome sequence analysis of Enterobacter cloacae strain Ghats1: insights into endophytic lifestyle-associated genomic adaptations.

Authors:  Rajesh P Shastry; Martin Welch; V Ravishankar Rai; Sudeep D Ghate; K Sandeep; P D Rekha
Journal:  Arch Microbiol       Date:  2020-03-12       Impact factor: 2.552

2.  The dissemination of multidrug-resistant Enterobacter cloacae throughout the UK and Ireland.

Authors:  Danesh Moradigaravand; Sandra Reuter; Veronique Martin; Sharon J Peacock; Julian Parkhill
Journal:  Nat Microbiol       Date:  2016-09-26       Impact factor: 17.745

3.  Genomic and Physiological Investigation of Heavy Metal Resistance from Plant Endophytic Methylobacterium radiotolerans MAMP 4754, Isolated from Combretum erythrophyllum.

Authors:  Mampolelo M Photolo; Lungile Sitole; Vuyo Mavumengwana; Matsobane G Tlou
Journal:  Int J Environ Res Public Health       Date:  2021-01-23       Impact factor: 3.390

Review 4.  Understanding pine wilt disease: roles of the pine endophytic bacteria and of the bacteria carried by the disease-causing pinewood nematode.

Authors:  Diogo N Proença; Gregor Grass; Paula V Morais
Journal:  Microbiologyopen       Date:  2016-10-26       Impact factor: 3.139

5.  Evolution of class 1 integrons: Mobilization and dispersal via food-borne bacteria.

Authors:  Timothy M Ghaly; Louise Chow; Amy J Asher; Liette S Waldron; Michael R Gillings
Journal:  PLoS One       Date:  2017-06-06       Impact factor: 3.240

6.  Wide Distribution and Specific Resistance Pattern to Third-Generation Cephalosporins of Enterobacter cloacae Complex Members in Humans and in the Environment in Guadeloupe (French West Indies).

Authors:  Matthieu Pot; Yann Reynaud; David Couvin; Célia Ducat; Séverine Ferdinand; François Gravey; Gaëlle Gruel; François Guérin; Edith Malpote; Sébastien Breurec; Antoine Talarmin; Stéphanie Guyomard-Rabenirina
Journal:  Front Microbiol       Date:  2021-06-25       Impact factor: 5.640

7.  Phage-host interactions during pseudolysogeny: Lessons from the Pid/dgo interaction.

Authors:  William Cenens; Angella Makumi; Mehari Tesfazgi Mebrhatu; Rob Lavigne; Abram Aertsen
Journal:  Bacteriophage       Date:  2013-05-21

8.  Comparative genome analysis of Enterobacter cloacae.

Authors:  Wing-Yee Liu; Chi-Fat Wong; Karl Ming-Kar Chung; Jing-Wei Jiang; Frederick Chi-Ching Leung
Journal:  PLoS One       Date:  2013-09-12       Impact factor: 3.240

9.  Complete genome of the switchgrass endophyte Enterobacter clocace P101.

Authors:  Jodi L Humann; Mark Wildung; Derek Pouchnik; Austin A Bates; Jennifer C Drew; Ursula N Zipperer; Eric W Triplett; Dorrie Main; Brenda K Schroeder
Journal:  Stand Genomic Sci       Date:  2014-02-15

Review 10.  "Omics" Tools for Better Understanding the Plant-Endophyte Interactions.

Authors:  Sanjana Kaul; Tanwi Sharma; Manoj K Dhar
Journal:  Front Plant Sci       Date:  2016-06-29       Impact factor: 5.753

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