Literature DB >> 22273582

Ribosome-independent biosynthesis of biologically active peptides: Application of synthetic biology to generate structural diversity.

Tobias W Giessen1, Mohamed A Marahiel.   

Abstract

Peptide natural products continue to play an important role in modern medicine as last-resort treatments of many life-threatening diseases, as they display many interesting biological activities ranging from antibiotic to antineoplastic. A large fraction of these microbial natural products is assembled by ribosome-independent mechanisms. Progress in sequencing technology and the mechanistic understanding of secondary metabolite pathways has led to the discovery of many formerly cryptic natural products and a molecular understanding of their assembly. Those advances enable us to apply protein and metabolic engineering approaches towards the manipulation of biosynthetic pathways. In this review we discuss the application potential of both templated and non-templated pathways as well as chemoenzymatic strategies for the structural diversification and tailoring of peptide natural products.
Copyright © 2012 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 22273582     DOI: 10.1016/j.febslet.2012.01.017

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  15 in total

Review 1.  Structure and noncanonical chemistry of nonribosomal peptide biosynthetic machinery.

Authors:  Heather L Condurso; Steven D Bruner
Journal:  Nat Prod Rep       Date:  2012-06-25       Impact factor: 13.423

2.  An ATP-Dependent Ligase with Substrate Flexibility Involved in Assembly of the Peptidyl Nucleoside Antibiotic Polyoxin.

Authors:  Rong Gong; Jianzhao Qi; Pan Wu; You-Sheng Cai; Hongmin Ma; Yang Liu; He Duan; Meng Wang; Zixin Deng; Neil P J Price; Wenqing Chen
Journal:  Appl Environ Microbiol       Date:  2018-06-18       Impact factor: 4.792

Review 3.  Enzymatic strategies and biocatalysts for amide bond formation: tricks of the trade outside of the ribosome.

Authors:  Anwesha Goswami; Steven G Van Lanen
Journal:  Mol Biosyst       Date:  2014-11-24

4.  A peptide ligase and the ribosome cooperate to synthesize the peptide pheganomycin.

Authors:  Motoyoshi Noike; Takashi Matsui; Koichi Ooya; Ikuo Sasaki; Shouta Ohtaki; Yoshimitsu Hamano; Chitose Maruyama; Jun Ishikawa; Yasuharu Satoh; Hajime Ito; Hiroyuki Morita; Tohru Dairi
Journal:  Nat Chem Biol       Date:  2014-11-24       Impact factor: 15.040

Review 5.  Engineering polyketide synthases and nonribosomal peptide synthetases.

Authors:  Gavin J Williams
Journal:  Curr Opin Struct Biol       Date:  2013-07-06       Impact factor: 6.809

6.  Use of the dehydrophos biosynthetic enzymes to prepare antimicrobial analogs of alaphosphin.

Authors:  Despina J Bougioukou; Chi P Ting; Spencer C Peck; Subha Mukherjee; Wilfred A van der Donk
Journal:  Org Biomol Chem       Date:  2019-01-23       Impact factor: 3.876

7.  Reinvigorating natural product combinatorial biosynthesis with synthetic biology.

Authors:  Eunji Kim; Bradley S Moore; Yeo Joon Yoon
Journal:  Nat Chem Biol       Date:  2015-09       Impact factor: 15.040

8.  Analysis of the linker region joining the adenylation and carrier protein domains of the modular nonribosomal peptide synthetases.

Authors:  Bradley R Miller; Jesse A Sundlov; Eric J Drake; Thomas A Makin; Andrew M Gulick
Journal:  Proteins       Date:  2014-07-05

9.  Insights into the molecular basis of biocontrol of Brassica pathogens by Bacillus amyloliquefaciens UCMB5113 lipopeptides.

Authors:  Shashidar Asari; Marc Ongena; Delphine Debois; Edwin De Pauw; Kunling Chen; Sarosh Bejai; Johan Meijer
Journal:  Ann Bot       Date:  2017-10-17       Impact factor: 4.357

10.  Characterization of Iturin V, a Novel Antimicrobial Lipopeptide from a Potential Probiotic Strain Lactobacillus sp. M31.

Authors:  Shelley Sardul Singh; Md Naushad Akhtar; Deepika Sharma; Santi M Mandal; Suresh Korpole
Journal:  Probiotics Antimicrob Proteins       Date:  2021-05-13       Impact factor: 4.609

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