Literature DB >> 22265017

De novo mutations of the gene encoding the histone acetyltransferase KAT6B cause Genitopatellar syndrome.

Michael A Simpson1, Charu Deshpande, Dimitra Dafou, Lisenka E L M Vissers, Wesley J Woollard, Susan E Holder, Gabriele Gillessen-Kaesbach, Ronny Derks, Susan M White, Ruthy Cohen-Snuijf, Sarina G Kant, Lies H Hoefsloot, Willie Reardon, Han G Brunner, Ernie M H F Bongers, Richard C Trembath.   

Abstract

Genitopatellar syndrome (GPS) is a rare disorder in which patellar aplasia or hypoplasia is associated with external genital anomalies and severe intellectual disability. Using an exome-sequencing approach, we identified de novo mutations of KAT6B in five individuals with GPS; a single nonsense variant and three frameshift indels, including a 4 bp deletion observed in two cases. All identified mutations are located within the terminal exon of the gene and are predicted to generate a truncated protein product lacking evolutionarily conserved domains. KAT6B encodes a member of the MYST family of histone acetyltranferases. We demonstrate a reduced level of both histone H3 and H4 acetylation in patient-derived cells suggesting that dysregulation of histone acetylation is a direct functional consequence of GPS alleles. These findings define the genetic basis of GPS and illustrate the complex role of the regulation of histone acetylation during development.
Copyright © 2012 The American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22265017      PMCID: PMC3276665          DOI: 10.1016/j.ajhg.2011.11.024

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  19 in total

1.  Whole-exome-sequencing identifies mutations in histone acetyltransferase gene KAT6B in individuals with the Say-Barber-Biesecker variant of Ohdo syndrome.

Authors:  Jill Clayton-Smith; James O'Sullivan; Sarah Daly; Sanjeev Bhaskar; Ruth Day; Beverley Anderson; Anne K Voss; Tim Thomas; Leslie G Biesecker; Philip Smith; Alan Fryer; Kate E Chandler; Bronwyn Kerr; May Tassabehji; Sally-Ann Lynch; Malgorzata Krajewska-Walasek; Shane McKee; Janine Smith; Elizabeth Sweeney; Sahar Mansour; Shehla Mohammed; Dian Donnai; Graeme Black
Journal:  Am J Hum Genet       Date:  2011-11-11       Impact factor: 11.025

2.  Mutations in origin recognition complex gene ORC4 cause Meier-Gorlin syndrome.

Authors:  Duane L Guernsey; Makoto Matsuoka; Haiyan Jiang; Susan Evans; Christine Macgillivray; Mathew Nightingale; Scott Perry; Meghan Ferguson; Marissa LeBlanc; Jean Paquette; Lysanne Patry; Andrea L Rideout; Aidan Thomas; Andrew Orr; Chris R McMaster; Jacques L Michaud; Cheri Deal; Sylvie Langlois; Duane W Superneau; Sandhya Parkash; Mark Ludman; David L Skidmore; Mark E Samuels
Journal:  Nat Genet       Date:  2011-02-27       Impact factor: 38.330

3.  Genitopatellar syndrome: a further case.

Authors:  Rossa Brugha; Maria Kinali; Kingi Aminu; Nicola Bridges; Sue E Holder
Journal:  Clin Dysmorphol       Date:  2011-07       Impact factor: 0.816

4.  Disruption of the histone acetyltransferase MYST4 leads to a Noonan syndrome-like phenotype and hyperactivated MAPK signaling in humans and mice.

Authors:  Michael Kraft; Ion Cristian Cirstea; Anne Kathrin Voss; Tim Thomas; Ina Goehring; Bilal N Sheikh; Lavinia Gordon; Hamish Scott; Gordon K Smyth; Mohammad Reza Ahmadian; Udo Trautmann; Martin Zenker; Marco Tartaglia; Arif Ekici; André Reis; Helmuth-Guenther Dörr; Anita Rauch; Christian Thomas Thiel
Journal:  J Clin Invest       Date:  2011-08-01       Impact factor: 14.808

5.  Mutations in NOTCH2 cause Hajdu-Cheney syndrome, a disorder of severe and progressive bone loss.

Authors:  Michael A Simpson; Melita D Irving; Esra Asilmaz; Mary J Gray; Dimitra Dafou; Frances V Elmslie; Sahar Mansour; Sue E Holder; Caroline E Brain; Barbara K Burton; Katherine H Kim; Richard M Pauli; Salim Aftimos; Helen Stewart; Chong Ae Kim; Muriel Holder-Espinasse; Stephen P Robertson; William M Drake; Richard C Trembath
Journal:  Nat Genet       Date:  2011-03-06       Impact factor: 38.330

6.  The Sequence Alignment/Map format and SAMtools.

Authors:  Heng Li; Bob Handsaker; Alec Wysoker; Tim Fennell; Jue Ruan; Nils Homer; Gabor Marth; Goncalo Abecasis; Richard Durbin
Journal:  Bioinformatics       Date:  2009-06-08       Impact factor: 6.937

7.  BEDTools: a flexible suite of utilities for comparing genomic features.

Authors:  Aaron R Quinlan; Ira M Hall
Journal:  Bioinformatics       Date:  2010-01-28       Impact factor: 6.937

8.  ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data.

Authors:  Kai Wang; Mingyao Li; Hakon Hakonarson
Journal:  Nucleic Acids Res       Date:  2010-07-03       Impact factor: 16.971

9.  Querkopf, a MYST family histone acetyltransferase, is required for normal cerebral cortex development.

Authors:  T Thomas; A K Voss; K Chowdhury; P Gruss
Journal:  Development       Date:  2000-06       Impact factor: 6.868

10.  Mutations in the pre-replication complex cause Meier-Gorlin syndrome.

Authors:  Louise S Bicknell; Ernie M H F Bongers; Andrea Leitch; Stephen Brown; Jeroen Schoots; Margaret E Harley; Salim Aftimos; Jumana Y Al-Aama; Michael Bober; Paul A J Brown; Hans van Bokhoven; John Dean; Alaa Y Edrees; Murray Feingold; Alan Fryer; Lies H Hoefsloot; Nikolaus Kau; Nine V A M Knoers; James Mackenzie; John M Opitz; Pierre Sarda; Alison Ross; I Karen Temple; Annick Toutain; Carol A Wise; Michael Wright; Andrew P Jackson
Journal:  Nat Genet       Date:  2011-02-27       Impact factor: 38.330

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  40 in total

1.  Dominant mutations in KAT6A cause intellectual disability with recognizable syndromic features.

Authors:  Emma Tham; Anna Lindstrand; Avni Santani; Helena Malmgren; Addie Nesbitt; Holly A Dubbs; Elaine H Zackai; Michael J Parker; Francisca Millan; Kenneth Rosenbaum; Golder N Wilson; Ann Nordgren
Journal:  Am J Hum Genet       Date:  2015-02-26       Impact factor: 11.025

2.  De novo nonsense mutations in KAT6A, a lysine acetyl-transferase gene, cause a syndrome including microcephaly and global developmental delay.

Authors:  Valerie A Arboleda; Hane Lee; Naghmeh Dorrani; Neda Zadeh; Mary Willis; Colleen Forsyth Macmurdo; Melanie A Manning; Andrea Kwan; Louanne Hudgins; Florian Barthelemy; M Carrie Miceli; Fabiola Quintero-Rivera; Sibel Kantarci; Samuel P Strom; Joshua L Deignan; Wayne W Grody; Eric Vilain; Stanley F Nelson
Journal:  Am J Hum Genet       Date:  2015-02-26       Impact factor: 11.025

Review 3.  Crosstalk between epigenetic readers regulates the MOZ/MORF HAT complexes.

Authors:  Brianna J Klein; Marie-Eve Lalonde; Jacques Côté; Xiang-Jiao Yang; Tatiana G Kutateladze
Journal:  Epigenetics       Date:  2013-10-29       Impact factor: 4.528

Review 4.  The promise of whole-exome sequencing in medical genetics.

Authors:  Bahareh Rabbani; Mustafa Tekin; Nejat Mahdieh
Journal:  J Hum Genet       Date:  2013-11-07       Impact factor: 3.172

5.  Deficiency of the chromatin regulator BRPF1 causes abnormal brain development.

Authors:  Linya You; Jinfeng Zou; Hong Zhao; Nicholas R Bertos; Morag Park; Edwin Wang; Xiang-Jiao Yang
Journal:  J Biol Chem       Date:  2015-01-07       Impact factor: 5.157

Review 6.  Genetic syndromes caused by mutations in epigenetic genes.

Authors:  María Berdasco; Manel Esteller
Journal:  Hum Genet       Date:  2013-01-31       Impact factor: 4.132

7.  An individual with blepharophimosis-ptosis-epicanthus inversus syndrome (BPES) and additional features expands the phenotype associated with mutations in KAT6B.

Authors:  Hung-Chun Yu; Elizabeth A Geiger; Livija Medne; Elaine H Zackai; Tamim H Shaikh
Journal:  Am J Med Genet A       Date:  2014-01-23       Impact factor: 2.802

8.  Aging-associated decrease in the histone acetyltransferase KAT6B is linked to altered hematopoietic stem cell differentiation.

Authors:  Eraj Shafiq Khokhar; Sneha Borikar; Elizabeth Eudy; Tim Stearns; Kira Young; Jennifer J Trowbridge
Journal:  Exp Hematol       Date:  2020-02-01       Impact factor: 3.084

Review 9.  Constitutional Epi/Genetic Conditions: Genetic, Epigenetic, and Environmental Factors.

Authors:  Laila C Schenkel; David Rodenhiser; Victoria Siu; Elizabeth McCready; Peter Ainsworth; Bekim Sadikovic
Journal:  J Pediatr Genet       Date:  2016-11-08

10.  The overexpression of MYST4 in human solid tumors is associated with increased aggressiveness and decreased overall survival.

Authors:  Chao-Lien Liu; Jim Jinn-Chyuan Sheu; Hsuan-Ping Lin; Yung-Ming Jeng; Cherry Yin-Yi Chang; Chih-Mei Chen; Jack Cheng; Tsui-Lien Mao
Journal:  Int J Clin Exp Pathol       Date:  2019-02-01
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