Literature DB >> 22259491

2-Fluoro-N'-[(2-hydroxynaphthalen-1-yl)methylidene]benzohydrazide.

Dong-Yue Wang1, Xu-Feng Meng, Jing-Jun Ma.   

Abstract

In the title mol-ecule, C(18)H(13)FN(2)O(2), the hy-droxy group is involved in an intra-molecular O-H⋯N hydrogen bond. The naphthyl ring system and the benzene ring form a dihedral angle of 31.0 (2)°. In the crystal, N-H⋯O hydrogen bonds link the mol-ecules into chains propagating in [101].

Entities:  

Year:  2011        PMID: 22259491      PMCID: PMC3254361          DOI: 10.1107/S1600536811050896

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of benzohydrazide compounds, see: El-Sayed et al. (2011 ▶); Horiuchi et al. (2009 ▶). For coordination compounds with benzohydrazide ligands, see: El-Dissouky et al. (2010 ▶); Zhang et al. (2010 ▶). For standard bond lengths, see: Allen et al. (1987 ▶). For the crystal structures of similar compounds, see: Suleiman Gwaram et al. (2010 ▶); Liu et al. (2011 ▶); Zhou et al. (2011 ▶); Meng et al. (2011 ▶).

Experimental

Crystal data

C18H13FN2O2 M = 308.30 Monoclinic, a = 7.078 (3) Å b = 29.1953 (16) Å c = 7.3013 (10) Å β = 106.521 (3)° V = 1446.5 (6) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 298 K 0.20 × 0.17 × 0.17 mm

Data collection

Bruker SMART 1K CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.980, T max = 0.983 4745 measured reflections 2641 independent reflections 1777 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.133 S = 1.03 2641 reflections 212 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.18 e Å−3 Δρmin = −0.16 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811050896/cv5206sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811050896/cv5206Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811050896/cv5206Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H13FN2O2F(000) = 640
Mr = 308.30Dx = 1.416 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
a = 7.078 (3) ÅCell parameters from 1565 reflections
b = 29.1953 (16) Åθ = 2.7–24.3°
c = 7.3013 (10) ŵ = 0.10 mm1
β = 106.521 (3)°T = 298 K
V = 1446.5 (6) Å3Block, colourless
Z = 40.20 × 0.17 × 0.17 mm
Bruker SMART 1K CCD area-detector diffractometer2641 independent reflections
Radiation source: fine-focus sealed tube1777 reflections with I > 2σ(I)
graphiteRint = 0.036
ω scanθmax = 27.0°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→9
Tmin = 0.980, Tmax = 0.983k = −37→36
4745 measured reflectionsl = −9→5
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.133H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0679P)2 + 0.0478P] where P = (Fo2 + 2Fc2)/3
2641 reflections(Δ/σ)max < 0.001
212 parametersΔρmax = 0.18 e Å3
3 restraintsΔρmin = −0.16 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F10.1283 (4)0.37460 (7)0.8168 (4)0.0749 (7)
N10.1961 (4)0.24093 (9)0.8406 (4)0.0472 (7)
N20.0468 (4)0.20916 (9)0.8074 (4)0.0454 (7)
O10.0092 (3)0.29182 (7)0.6358 (3)0.0568 (6)
O2−0.3144 (4)0.18598 (9)0.7215 (4)0.0626 (7)
H2−0.22110.20320.72830.094*
C10.3335 (4)0.31244 (10)0.8066 (4)0.0406 (7)
C20.3090 (5)0.35837 (11)0.8366 (5)0.0498 (8)
C30.4602 (7)0.38825 (14)0.8874 (6)0.0664 (11)
H30.43770.41910.90550.080*
C40.6445 (7)0.37250 (16)0.9116 (6)0.0723 (13)
H40.75000.39270.94820.087*
C50.6796 (5)0.32759 (16)0.8836 (6)0.0698 (12)
H50.80750.31730.89890.084*
C60.5243 (5)0.29761 (13)0.8327 (5)0.0549 (9)
H60.54800.26680.81560.066*
C70.1631 (4)0.28143 (10)0.7509 (4)0.0412 (7)
C80.0955 (5)0.17013 (11)0.8843 (5)0.0427 (7)
H80.22660.16420.94880.051*
C9−0.0507 (4)0.13518 (11)0.8723 (4)0.0417 (7)
C10−0.2470 (5)0.14513 (12)0.7981 (5)0.0485 (8)
C11−0.3917 (6)0.11228 (14)0.7994 (6)0.0615 (10)
H11−0.52450.11940.74950.074*
C12−0.3365 (6)0.07047 (14)0.8733 (6)0.0655 (11)
H12−0.43340.04900.87330.079*
C13−0.1387 (6)0.05826 (11)0.9502 (5)0.0534 (9)
C14−0.0837 (7)0.01541 (13)1.0315 (6)0.0691 (11)
H14−0.1810−0.00601.03140.083*
C150.1059 (8)0.00411 (13)1.1100 (6)0.0718 (12)
H150.1393−0.02461.16450.086*
C160.2514 (6)0.03585 (12)1.1089 (5)0.0641 (10)
H160.38320.02841.16350.077*
C170.2030 (5)0.07762 (10)1.0289 (5)0.0505 (8)
H170.30300.09821.02720.061*
C180.0072 (5)0.09071 (10)0.9490 (4)0.0436 (8)
H10.311 (4)0.2354 (13)0.931 (4)0.080*
U11U22U33U12U13U23
F10.0780 (15)0.0538 (12)0.0873 (17)0.0145 (11)0.0145 (12)0.0005 (11)
N10.0436 (15)0.0432 (15)0.0443 (17)−0.0058 (11)−0.0042 (12)0.0034 (12)
N20.0497 (16)0.0401 (15)0.0415 (16)−0.0063 (12)0.0048 (12)−0.0037 (12)
O10.0516 (14)0.0480 (12)0.0549 (16)0.0006 (10)−0.0108 (12)0.0027 (11)
O20.0512 (13)0.0647 (17)0.0658 (17)0.0022 (12)0.0066 (12)0.0068 (13)
C10.0448 (17)0.0422 (17)0.0290 (17)0.0014 (13)0.0011 (13)0.0037 (13)
C20.059 (2)0.0475 (19)0.0366 (19)0.0014 (17)0.0041 (16)0.0039 (15)
C30.087 (3)0.053 (2)0.049 (2)−0.018 (2)0.004 (2)0.0039 (18)
C40.077 (3)0.082 (3)0.047 (2)−0.037 (2)0.000 (2)0.014 (2)
C50.046 (2)0.105 (3)0.055 (2)−0.009 (2)0.0088 (18)0.020 (2)
C60.048 (2)0.069 (2)0.046 (2)0.0003 (17)0.0103 (15)0.0072 (17)
C70.0419 (17)0.0411 (17)0.0361 (18)0.0043 (13)0.0040 (15)−0.0010 (14)
C80.0414 (16)0.0457 (18)0.0379 (18)−0.0017 (13)0.0060 (14)−0.0039 (14)
C90.0494 (19)0.0422 (18)0.0318 (17)−0.0057 (14)0.0087 (14)−0.0042 (13)
C100.0467 (19)0.059 (2)0.036 (2)−0.0062 (15)0.0065 (15)−0.0045 (16)
C110.047 (2)0.079 (3)0.056 (2)−0.0119 (18)0.0103 (17)−0.007 (2)
C120.066 (3)0.075 (3)0.058 (3)−0.031 (2)0.021 (2)−0.012 (2)
C130.072 (2)0.049 (2)0.041 (2)−0.0151 (17)0.0197 (17)−0.0073 (16)
C140.102 (3)0.053 (2)0.056 (3)−0.024 (2)0.029 (3)−0.0059 (19)
C150.112 (4)0.047 (2)0.055 (3)−0.005 (2)0.022 (3)0.0050 (18)
C160.079 (3)0.057 (2)0.052 (2)0.007 (2)0.0120 (19)0.0018 (18)
C170.059 (2)0.0412 (17)0.049 (2)0.0013 (16)0.0116 (17)0.0006 (15)
C180.0588 (19)0.0397 (17)0.0340 (18)−0.0087 (14)0.0159 (15)−0.0080 (13)
F1—C21.332 (4)C8—C91.438 (4)
N1—C71.339 (4)C8—H80.9300
N1—N21.375 (3)C9—C101.371 (4)
N1—H10.905 (10)C9—C181.427 (4)
N2—C81.274 (4)C10—C111.405 (5)
O1—C71.210 (4)C11—C121.347 (5)
O2—C101.346 (4)C11—H110.9300
O2—H20.8200C12—C131.398 (5)
C1—C61.379 (5)C12—H120.9300
C1—C21.378 (4)C13—C141.392 (5)
C1—C71.470 (4)C13—C181.403 (4)
C2—C31.348 (5)C14—C151.341 (6)
C3—C41.347 (6)C14—H140.9300
C3—H30.9300C15—C161.387 (6)
C4—C51.361 (6)C15—H150.9300
C4—H40.9300C16—C171.353 (4)
C5—C61.371 (5)C16—H160.9300
C5—H50.9300C17—C181.396 (5)
C6—H60.9300C17—H170.9300
C7—N1—N2119.4 (2)C10—C9—C8120.3 (3)
C7—N1—H1121 (3)C18—C9—C8120.0 (3)
N2—N1—H1120 (3)O2—C10—C9123.5 (3)
C8—N2—N1115.4 (3)O2—C10—C11115.8 (3)
C10—O2—H2109.5C9—C10—C11120.7 (3)
C6—C1—C2116.5 (3)C12—C11—C10119.5 (4)
C6—C1—C7122.6 (3)C12—C11—H11120.2
C2—C1—C7120.9 (3)C10—C11—H11120.2
F1—C2—C3117.5 (3)C11—C12—C13122.3 (3)
F1—C2—C1119.3 (3)C11—C12—H12118.8
C3—C2—C1123.2 (3)C13—C12—H12118.8
C4—C3—C2118.6 (4)C14—C13—C12121.8 (4)
C4—C3—H3120.7C14—C13—C18119.5 (4)
C2—C3—H3120.7C12—C13—C18118.7 (3)
C3—C4—C5121.4 (4)C15—C14—C13121.8 (4)
C3—C4—H4119.3C15—C14—H14119.1
C5—C4—H4119.3C13—C14—H14119.1
C4—C5—C6119.3 (4)C14—C15—C16119.2 (4)
C4—C5—H5120.3C14—C15—H15120.4
C6—C5—H5120.3C16—C15—H15120.4
C5—C6—C1121.0 (4)C17—C16—C15120.5 (4)
C5—C6—H6119.5C17—C16—H16119.8
C1—C6—H6119.5C15—C16—H16119.8
O1—C7—N1123.9 (3)C16—C17—C18121.8 (3)
O1—C7—C1122.9 (3)C16—C17—H17119.1
N1—C7—C1113.2 (3)C18—C17—H17119.1
N2—C8—C9120.5 (3)C17—C18—C13117.2 (3)
N2—C8—H8119.7C17—C18—C9123.6 (3)
C9—C8—H8119.7C13—C18—C9119.1 (3)
C10—C9—C18119.6 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.91 (1)1.91 (2)2.785 (3)163 (4)
O2—H2···N20.821.832.545 (4)145.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1i0.91 (1)1.91 (2)2.785 (3)163 (4)
O2—H2⋯N20.821.832.545 (4)145

Symmetry code: (i) .

  7 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  N'-[1-(5-Bromo-2-hydroxy-phen-yl)ethyl-idene]-3,4,5-trihydroxy-benzohydrazide dimethyl sulfoxide solvate trihydrate.

Authors:  Nura Suleiman Gwaram; Hamid Khaledi; Hapipah Mohd Ali; Ward T Robinson; Mahmood A Abdulla
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-27

3.  Discovery of novel thieno[2,3-d]pyrimidin-4-yl hydrazone-based inhibitors of cyclin D1-CDK4: synthesis, biological evaluation and structure-activity relationships. Part 2.

Authors:  Takao Horiuchi; Motoko Nagata; Mayumi Kitagawa; Kouichi Akahane; Kouichi Uoto
Journal:  Bioorg Med Chem       Date:  2009-10-24       Impact factor: 3.641

4.  [2-Hydroxy-N'-(4-oxo-4-phenyl-butan-2-yl-idene)benzohydrazidato(2-)]pyridine-copper(II).

Authors:  Shu-Ping Zhang; Ying Wei; Si-Chang Shao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-24

5.  N'-[(2-Methoxynaphthalen-1-yl)methyl-idene]-4-methyl-benzohydrazide.

Authors:  Xu-Feng Meng; Dong-Yue Wang; Jing-Jun Ma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-29

6.  N'-(5-Bromo-2-hy-droxy-benzyl-idene)-4-nitro-benzohydrazide methanol monosolvate.

Authors:  Wei-Hua Liu; Shuang-Ju Song; Jing-Jun Ma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-30

7.  N'-(3,5-Dibromo-2-hy-droxy-benzyl-idene)-4-nitro-benzohydrazide methanol monosolvate.

Authors:  Xin Zhou; Shu-Tao Gao; Jing-Jun Ma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-11
  7 in total
  2 in total

1.  (E)-N'-(5-Bromo-2-hy-droxy-benzyl-idene)-4-(dimethyl-amino)-benzohydrazide.

Authors:  En-Yu Wei
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-04

2.  N'-(3-Fluoro-benzyl-idene)-2-methyl-benzohydrazide.

Authors:  Ying Song; Jian-Long Zhao; Jan-Gang Wang; Fei Lu; Hong Lu; Shi-Peng Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-13
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.