Literature DB >> 22347028

N'-[(2Z)-4-Oxo-4-phenyl-but-2-en-2-yl]pyridine-4-carbohydrazide.

Rahman Bikas, Parisa Mahboubi Anarjan, Sanam Aslekhademi, Seik Weng Ng, Edward R T Tiekink.   

Abstract

There are significant twists in the title compound, C(16)H(15)N(3)O(2), as seen in the dihedral angle between the benzene and adjacent but-2-enal group [29.26 (4)°] and between the pyridine ring and amide group [24.79 (6)°]. A twist is also evident around the hydrazine bond [the C-N-N-C torsion angle is -138.25 (13)°]. The conformation about the ethene bond is Z. An intra-molecular N-H⋯O hydrogen bond involving the benzoyl O atom and leading to an S(6) motif is formed. Significant delocalization of π-electron density is found in this part of the mol-ecule. In the crystal, helical supra-molecular chains aligned along the b axis and mediated by N-H⋯O hydrogen bonds are formed.

Entities:  

Year:  2012        PMID: 22347028      PMCID: PMC3275172          DOI: 10.1107/S1600536812000529

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structures of related carbohydrazides, see: Bikas et al. (2010 ▶, 2012 ▶).

Experimental

Crystal data

C16H15N3O2 M = 281.31 Monoclinic, a = 15.7640 (4) Å b = 6.5194 (1) Å c = 13.3093 (3) Å β = 93.579 (2)° V = 1365.15 (5) Å3 Z = 4 Cu Kα radiation μ = 0.76 mm−1 T = 100 K 0.20 × 0.10 × 0.05 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010 ▶) T min = 0.864, T max = 0.963 5321 measured reflections 2808 independent reflections 2397 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.109 S = 1.02 2808 reflections 199 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.30 e Å−3 Δρmin = −0.23 e Å−3 Data collection: CrysAlis PRO (Agilent, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812000529/hg5158sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812000529/hg5158Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812000529/hg5158Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H15N3O2F(000) = 592
Mr = 281.31Dx = 1.369 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ybcCell parameters from 2202 reflections
a = 15.7640 (4) Åθ = 2.8–76.4°
b = 6.5194 (1) ŵ = 0.76 mm1
c = 13.3093 (3) ÅT = 100 K
β = 93.579 (2)°Prism, colourless
V = 1365.15 (5) Å30.20 × 0.10 × 0.05 mm
Z = 4
Agilent SuperNova Dual diffractometer with an Atlas detector2808 independent reflections
Radiation source: SuperNova (Cu) X-ray Source2397 reflections with I > 2σ(I)
MirrorRint = 0.022
Detector resolution: 10.4041 pixels mm-1θmax = 76.6°, θmin = 2.8°
ω scanh = −14→19
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010)k = −8→4
Tmin = 0.864, Tmax = 0.963l = −13→16
5321 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.109H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0568P)2 + 0.4474P] where P = (Fo2 + 2Fc2)/3
2808 reflections(Δ/σ)max = 0.001
199 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.23 e Å3
xyzUiso*/Ueq
O10.64472 (6)0.16395 (15)0.10581 (7)0.0222 (2)
O20.39259 (6)0.19577 (14)0.15136 (7)0.0192 (2)
N10.93135 (7)0.45503 (19)0.21632 (9)0.0244 (3)
N20.61169 (7)0.47152 (17)0.17399 (9)0.0182 (2)
N30.52548 (7)0.43426 (17)0.15465 (8)0.0176 (2)
C10.75840 (8)0.3754 (2)0.17323 (9)0.0170 (3)
C20.81664 (9)0.2161 (2)0.18446 (10)0.0215 (3)
H2A0.79860.07750.17730.026*
C30.90178 (9)0.2629 (2)0.20629 (11)0.0249 (3)
H3A0.94110.15290.21450.030*
C40.87448 (9)0.6070 (2)0.20366 (10)0.0225 (3)
H40.89450.74420.20950.027*
C50.78809 (8)0.5759 (2)0.18252 (10)0.0194 (3)
H50.75020.68880.17460.023*
C60.66681 (8)0.3232 (2)0.14810 (9)0.0168 (3)
C70.47294 (8)0.58056 (19)0.11764 (9)0.0170 (3)
C80.50980 (8)0.7859 (2)0.09507 (10)0.0197 (3)
H8A0.53480.84690.15740.030*
H8B0.46480.87580.06610.030*
H8C0.55390.76950.04700.030*
C90.38667 (8)0.5408 (2)0.09966 (10)0.0174 (3)
H90.35080.64920.07530.021*
C100.34988 (8)0.3474 (2)0.11585 (9)0.0166 (3)
C110.25751 (8)0.3125 (2)0.08761 (9)0.0173 (3)
C120.19729 (8)0.4687 (2)0.08987 (10)0.0204 (3)
H120.21470.60460.10660.025*
C130.11164 (9)0.4262 (2)0.06766 (11)0.0251 (3)
H130.07060.53220.07110.030*
C140.08620 (9)0.2289 (2)0.04045 (11)0.0260 (3)
H140.02770.20030.02500.031*
C150.14599 (9)0.0735 (2)0.03576 (11)0.0248 (3)
H150.1286−0.06100.01630.030*
C160.23130 (9)0.1148 (2)0.05958 (10)0.0209 (3)
H160.27210.00800.05680.025*
H20.6210 (11)0.549 (3)0.2275 (14)0.029 (5)*
H30.5045 (11)0.308 (3)0.1636 (13)0.028 (4)*
U11U22U33U12U13U23
O10.0214 (5)0.0160 (5)0.0288 (5)−0.0010 (4)−0.0021 (4)−0.0039 (4)
O20.0180 (4)0.0157 (5)0.0239 (5)0.0014 (3)0.0007 (4)0.0039 (4)
N10.0184 (6)0.0260 (6)0.0289 (6)−0.0015 (5)0.0014 (5)−0.0019 (5)
N20.0150 (5)0.0182 (5)0.0213 (6)−0.0014 (4)−0.0003 (4)−0.0038 (4)
N30.0146 (5)0.0158 (5)0.0224 (5)−0.0007 (4)0.0006 (4)0.0004 (4)
C10.0171 (6)0.0179 (6)0.0159 (6)−0.0012 (5)0.0009 (5)−0.0004 (5)
C20.0205 (6)0.0171 (6)0.0268 (7)0.0007 (5)0.0009 (5)0.0007 (5)
C30.0198 (7)0.0235 (7)0.0312 (7)0.0024 (5)0.0006 (6)0.0009 (6)
C40.0219 (7)0.0197 (7)0.0261 (7)−0.0038 (5)0.0028 (5)−0.0020 (5)
C50.0198 (6)0.0173 (6)0.0214 (6)−0.0004 (5)0.0024 (5)−0.0006 (5)
C60.0183 (6)0.0155 (6)0.0165 (6)−0.0001 (5)0.0011 (5)0.0017 (5)
C70.0204 (6)0.0147 (6)0.0159 (6)0.0009 (5)0.0021 (5)−0.0006 (5)
C80.0210 (6)0.0152 (6)0.0231 (6)−0.0009 (5)0.0017 (5)0.0008 (5)
C90.0180 (6)0.0160 (6)0.0183 (6)0.0022 (5)0.0015 (5)0.0010 (5)
C100.0177 (6)0.0163 (6)0.0160 (6)0.0024 (5)0.0030 (5)0.0007 (5)
C110.0168 (6)0.0189 (6)0.0162 (6)−0.0006 (5)0.0016 (5)0.0016 (5)
C120.0193 (6)0.0194 (6)0.0227 (6)0.0013 (5)0.0019 (5)0.0009 (5)
C130.0189 (7)0.0277 (7)0.0289 (7)0.0043 (5)0.0026 (5)0.0020 (6)
C140.0170 (6)0.0323 (8)0.0284 (7)−0.0037 (5)−0.0012 (5)0.0018 (6)
C150.0237 (7)0.0233 (7)0.0271 (7)−0.0050 (5)0.0003 (5)−0.0014 (6)
C160.0209 (7)0.0196 (7)0.0223 (6)0.0003 (5)0.0024 (5)0.0000 (5)
O1—C61.2213 (16)C7—C81.4973 (17)
O2—C101.2705 (15)C8—H8A0.9800
N1—C41.3395 (18)C8—H8B0.9800
N1—C31.3401 (18)C8—H8C0.9800
N2—C61.3587 (17)C9—C101.4097 (18)
N2—N31.3887 (15)C9—H90.9500
N2—H20.878 (18)C10—C111.4984 (17)
N3—C71.3369 (16)C11—C121.3938 (18)
N3—H30.899 (18)C11—C161.3974 (19)
C1—C21.3884 (18)C12—C131.3918 (18)
C1—C51.3914 (18)C12—H120.9500
C1—C61.5006 (17)C13—C141.389 (2)
C2—C31.3894 (19)C13—H130.9500
C2—H2A0.9500C14—C151.388 (2)
C3—H3A0.9500C14—H140.9500
C4—C51.3882 (19)C15—C161.3887 (19)
C4—H40.9500C15—H150.9500
C5—H50.9500C16—H160.9500
C7—C91.3905 (18)
C4—N1—C3116.92 (12)C7—C8—H8B109.5
C6—N2—N3117.55 (11)H8A—C8—H8B109.5
C6—N2—H2122.5 (11)C7—C8—H8C109.5
N3—N2—H2111.3 (11)H8A—C8—H8C109.5
C7—N3—N2121.34 (11)H8B—C8—H8C109.5
C7—N3—H3118.6 (11)C7—C9—C10123.22 (12)
N2—N3—H3120.0 (11)C7—C9—H9118.4
C2—C1—C5118.48 (12)C10—C9—H9118.4
C2—C1—C6118.35 (12)O2—C10—C9122.62 (12)
C5—C1—C6123.13 (12)O2—C10—C11117.35 (11)
C1—C2—C3118.80 (13)C9—C10—C11120.00 (11)
C1—C2—H2A120.6C12—C11—C16119.30 (12)
C3—C2—H2A120.6C12—C11—C10122.43 (12)
N1—C3—C2123.49 (13)C16—C11—C10118.26 (12)
N1—C3—H3A118.3C13—C12—C11120.19 (13)
C2—C3—H3A118.3C13—C12—H12119.9
N1—C4—C5123.92 (13)C11—C12—H12119.9
N1—C4—H4118.0C14—C13—C12120.03 (13)
C5—C4—H4118.0C14—C13—H13120.0
C4—C5—C1118.39 (12)C12—C13—H13120.0
C4—C5—H5120.8C15—C14—C13120.13 (13)
C1—C5—H5120.8C15—C14—H14119.9
O1—C6—N2123.60 (12)C13—C14—H14119.9
O1—C6—C1122.56 (12)C16—C15—C14119.93 (13)
N2—C6—C1113.82 (11)C16—C15—H15120.0
N3—C7—C9120.46 (12)C14—C15—H15120.0
N3—C7—C8118.20 (11)C15—C16—C11120.38 (13)
C9—C7—C8121.33 (11)C15—C16—H16119.8
C7—C8—H8A109.5C11—C16—H16119.8
C6—N2—N3—C7−138.25 (13)N3—C7—C9—C10−1.89 (19)
C5—C1—C2—C31.2 (2)C8—C7—C9—C10177.29 (12)
C6—C1—C2—C3179.09 (12)C7—C9—C10—O22.3 (2)
C4—N1—C3—C2−0.4 (2)C7—C9—C10—C11−175.56 (11)
C1—C2—C3—N1−0.6 (2)O2—C10—C11—C12151.66 (13)
C3—N1—C4—C50.9 (2)C9—C10—C11—C12−30.34 (18)
N1—C4—C5—C1−0.4 (2)O2—C10—C11—C16−27.33 (17)
C2—C1—C5—C4−0.68 (19)C9—C10—C11—C16150.67 (12)
C6—C1—C5—C4−178.49 (12)C16—C11—C12—C132.1 (2)
N3—N2—C6—O12.78 (19)C10—C11—C12—C13−176.86 (12)
N3—N2—C6—C1−179.11 (10)C11—C12—C13—C14−1.8 (2)
C2—C1—C6—O1−24.59 (19)C12—C13—C14—C150.3 (2)
C5—C1—C6—O1153.23 (13)C13—C14—C15—C160.8 (2)
C2—C1—C6—N2157.27 (12)C14—C15—C16—C11−0.5 (2)
C5—C1—C6—N2−24.91 (18)C12—C11—C16—C15−1.0 (2)
N2—N3—C7—C9−179.40 (11)C10—C11—C16—C15178.01 (12)
N2—N3—C7—C81.39 (18)
D—H···AD—HH···AD···AD—H···A
N2—H2···O2i0.88 (2)1.90 (2)2.750 (2)163 (2)
N3—H3···O20.90 (2)1.91 (2)2.607 (1)133 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯O2i0.88 (2)1.90 (2)2.750 (2)163 (2)
N3—H3⋯O20.90 (2)1.91 (2)2.607 (1)133 (2)

Symmetry code: (i) .

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