Literature DB >> 22259341

Bis[μ(3)-N'-oxidopyridine-2-carbox-imidamidato(2-)]bis-[μ(2)-N'-oxido-pyridine-2-carboximidamidato(1-)]tetra-pyridine-tetra-nickel(II) dinitrate.

Xiao-Hui Deng, Jing-Wen Ran.   

Abstract

The title compound, [Ni(4)(C(6)H(5)N(3)O)(2)(C(6)H(6)N(3)O)(2)(C(5)H(5)N)(4)](NO(3))(2), is a tetra-nuclear nickel complex containing a single-decker cation, located on an inversion center. The two unique Ni(II) cations are N,N',N'',O-chelated by carbox-imid-amid-ate(2-) and carboximidamidate(1-) anions, forming a distorted four-coordinate planar structure, while the other two Ni(II) atoms are N,N',O,O'-chelated by the same bridging ligands and two pyridine mol-ecules, affording six-coordinated metals in an octa-hedral geometry. The cation is isostructural with the complex crystallized with perchlorate counter-ions in place of nitrate.

Entities:  

Year:  2011        PMID: 22259341      PMCID: PMC3254310          DOI: 10.1107/S1600536811052524

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For similar metal complexes, see: Kou et al. (2010 ▶); Papatriantafyllopoulou et al. (2008 ▶); Inglis et al. (2010 ▶); Deng & Ran (2011 ▶). For the synthesis of the ligand pyridine-2-amidoxine, see: Bernasek (1957 ▶).

Experimental

Crystal data

[Ni4(C6H5N3O)2(C6H6N3O)2(C5H5N)4](NO3)2 M = 1217.80 Triclinic, a = 10.4356 (6) Å b = 10.7190 (8) Å c = 11.2908 (9) Å α = 92.041 (6)° β = 98.240 (5)° γ = 100.870 (5)° V = 1224.96 (15) Å3 Z = 1 Mo Kα radiation μ = 1.59 mm−1 T = 293 K 0.40 × 0.38 × 0.35 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.569, T max = 0.606 9481 measured reflections 4286 independent reflections 3180 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.100 S = 1.03 4286 reflections 349 parameters 8 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.66 e Å−3 Δρmin = −0.52 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811052524/bh2397sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811052524/bh2397Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni4(C6H5N3O)2(C6H6N3O)2(C5H5N)4](NO3)2Z = 1
Mr = 1217.80F(000) = 624
Triclinic, P1Dx = 1.651 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 10.4356 (6) ÅCell parameters from 1738 reflections
b = 10.7190 (8) Åθ = 3.1–21.8°
c = 11.2908 (9) ŵ = 1.59 mm1
α = 92.041 (6)°T = 293 K
β = 98.240 (5)°Block, brown
γ = 100.870 (5)°0.40 × 0.38 × 0.35 mm
V = 1224.96 (15) Å3
Bruker SMART APEXII CCD area-detector diffractometer4286 independent reflections
Radiation source: fine-focus sealed tube3180 reflections with I > 2σ(I)
graphiteRint = 0.039
φ and ω scansθmax = 25.0°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −12→12
Tmin = 0.569, Tmax = 0.606k = −12→11
9481 measured reflectionsl = −9→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.100H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.042P)2 + 0.4034P] where P = (Fo2 + 2Fc2)/3
4286 reflections(Δ/σ)max = 0.001
349 parametersΔρmax = 0.66 e Å3
8 restraintsΔρmin = −0.52 e Å3
0 constraints
xyzUiso*/Ueq
Ni10.45373 (3)0.49188 (3)0.66926 (3)0.03132 (8)
Ni20.37394 (3)0.76610 (3)0.59280 (3)0.03324 (9)
N10.45234 (18)0.33873 (19)0.77743 (18)0.0346 (5)
N20.50204 (18)0.35800 (18)0.55758 (17)0.0323 (5)
N30.65769 (18)0.5669 (2)0.75316 (18)0.0364 (6)
N40.24626 (18)0.4257 (2)0.61209 (18)0.0371 (6)
N50.35016 (18)0.70397 (19)0.74148 (18)0.0340 (5)
N60.2507 (2)0.7224 (2)0.9124 (2)0.0510 (7)
H6B0.2906 (19)0.6662 (16)0.941 (2)0.061*
H6A0.235 (2)0.7699 (19)0.9683 (17)0.061*
N70.27188 (19)0.88369 (19)0.63555 (19)0.0384 (6)
N80.4142 (2)0.82419 (19)0.44897 (19)0.0419 (6)
H80.39730.89400.42130.050*
N90.2065 (2)0.9041 (2)0.1685 (2)0.0626 (7)
O10.40271 (16)0.60905 (16)0.79192 (15)0.0387 (5)
O20.45424 (15)0.63556 (15)0.55536 (14)0.0346 (4)
O30.2335 (2)0.9647 (2)0.2650 (2)0.0902 (8)
O40.1740 (3)0.7894 (3)0.1607 (3)0.1234 (12)
O50.2296 (4)0.9553 (3)0.0776 (2)0.1285 (11)
C10.4176 (3)0.3303 (3)0.8866 (2)0.0477 (8)
H10.39740.40170.92340.057*
C20.4105 (3)0.2203 (3)0.9472 (3)0.0562 (9)
H20.38530.21711.02290.067*
C30.4416 (3)0.1151 (3)0.8929 (3)0.0532 (9)
H30.43520.03900.93070.064*
C40.4823 (2)0.1235 (3)0.7816 (2)0.0410 (7)
H40.50670.05440.74470.049*
C50.4859 (2)0.2373 (2)0.7266 (2)0.0332 (7)
C60.5271 (2)0.2555 (2)0.6071 (2)0.0321 (6)
C70.7375 (2)0.4927 (3)0.8027 (3)0.0480 (8)
H70.71260.40510.78650.058*
C80.8551 (3)0.5403 (3)0.8767 (3)0.0612 (10)
H8A0.90770.48560.91010.073*
C90.8934 (3)0.6691 (3)0.9002 (3)0.0651 (11)
H90.97090.70330.95170.078*
C100.8154 (3)0.7466 (3)0.8465 (3)0.0587 (10)
H100.84050.83470.85850.070*
C110.6988 (2)0.6920 (3)0.7743 (3)0.0445 (8)
H110.64610.74550.73850.053*
C120.1604 (2)0.4086 (3)0.6893 (3)0.0497 (8)
H120.19190.42910.77030.060*
C130.0283 (3)0.3623 (3)0.6558 (3)0.0654 (10)
H13−0.02830.35130.71280.079*
C14−0.0189 (3)0.3328 (3)0.5370 (4)0.0708 (11)
H14−0.10840.30140.51140.085*
C150.0670 (3)0.3500 (3)0.4571 (3)0.0664 (10)
H150.03710.33090.37570.080*
C160.1994 (3)0.3960 (3)0.4975 (3)0.0503 (8)
H160.25770.40650.44190.060*
C170.2787 (2)0.7604 (2)0.8038 (2)0.0374 (7)
C180.2286 (2)0.8621 (2)0.7436 (2)0.0368 (7)
C190.1439 (2)0.9336 (3)0.7852 (3)0.0529 (9)
H190.11370.91750.85770.063*
C200.1053 (3)1.0286 (3)0.7175 (3)0.0617 (10)
H200.04981.07800.74460.074*
C210.1495 (3)1.0495 (3)0.6102 (3)0.0585 (9)
H210.12391.11320.56390.070*
C220.2319 (3)0.9763 (3)0.5708 (3)0.0488 (8)
H220.26080.99110.49750.059*
U11U22U33U12U13U23
Ni10.03287 (15)0.03169 (17)0.03126 (17)0.01043 (13)0.00592 (13)0.00101 (13)
Ni20.03572 (15)0.03221 (17)0.03383 (17)0.01353 (13)0.00404 (14)−0.00190 (14)
N10.0353 (10)0.0386 (12)0.0312 (11)0.0102 (9)0.0055 (9)0.0022 (9)
N20.0389 (10)0.0305 (11)0.0292 (11)0.0082 (9)0.0091 (9)0.0017 (9)
N30.0362 (10)0.0368 (11)0.0378 (12)0.0088 (9)0.0088 (9)0.0010 (10)
N40.0353 (10)0.0417 (12)0.0359 (11)0.0088 (9)0.0094 (9)0.0008 (10)
N50.0349 (10)0.0352 (11)0.0342 (11)0.0131 (9)0.0061 (9)−0.0035 (9)
N60.0580 (12)0.0633 (15)0.0413 (13)0.0282 (11)0.0185 (11)0.0009 (12)
N70.0382 (10)0.0358 (11)0.0401 (12)0.0112 (9)−0.0011 (10)−0.0057 (10)
N80.0565 (12)0.0310 (11)0.0451 (13)0.0210 (10)0.0133 (10)0.0057 (10)
N90.0837 (15)0.0704 (16)0.0504 (15)0.0439 (13)0.0246 (13)0.0175 (13)
O10.0458 (9)0.0395 (10)0.0345 (9)0.0176 (8)0.0066 (8)0.0013 (8)
O20.0448 (8)0.0347 (9)0.0299 (9)0.0180 (7)0.0107 (7)0.0037 (7)
O30.1267 (16)0.1144 (18)0.0461 (13)0.0744 (14)0.0053 (13)−0.0103 (13)
O40.151 (2)0.079 (2)0.138 (3)−0.0138 (19)0.064 (2)0.0039 (19)
O50.243 (3)0.0930 (18)0.0743 (17)0.0774 (19)0.044 (2)0.0252 (15)
C10.0498 (14)0.0572 (18)0.0381 (15)0.0145 (13)0.0081 (13)0.0043 (14)
C20.0515 (15)0.085 (2)0.0355 (15)0.0151 (16)0.0099 (13)0.0193 (15)
C30.0510 (15)0.0552 (18)0.0529 (17)0.0102 (14)0.0022 (14)0.0224 (14)
C40.0394 (13)0.0388 (15)0.0435 (15)0.0086 (12)−0.0005 (12)0.0071 (12)
C50.0303 (11)0.0332 (13)0.0347 (14)0.0042 (10)0.0028 (11)0.0020 (11)
C60.0332 (11)0.0274 (13)0.0346 (13)0.0061 (10)0.0017 (11)−0.0005 (11)
C70.0384 (13)0.0400 (15)0.0642 (19)0.0097 (12)0.0004 (14)0.0037 (14)
C80.0447 (15)0.0564 (18)0.078 (2)0.0122 (14)−0.0111 (16)0.0107 (17)
C90.0421 (15)0.068 (2)0.074 (2)0.0004 (16)−0.0103 (16)−0.0087 (18)
C100.0466 (15)0.0435 (17)0.081 (2)0.0018 (14)0.0066 (16)−0.0128 (16)
C110.0408 (13)0.0436 (15)0.0519 (17)0.0136 (12)0.0096 (13)0.0020 (13)
C120.0398 (13)0.0613 (18)0.0474 (17)0.0088 (13)0.0082 (13)−0.0031 (15)
C130.0443 (15)0.060 (2)0.096 (3)0.0107 (14)0.0270 (16)−0.0007 (19)
C140.0370 (14)0.0539 (19)0.115 (3)0.0073 (14)−0.0030 (17)−0.021 (2)
C150.0554 (17)0.069 (2)0.066 (2)0.0117 (16)−0.0144 (16)−0.0184 (18)
C160.0502 (15)0.0569 (18)0.0431 (16)0.0117 (14)0.0049 (13)−0.0024 (14)
C170.0351 (12)0.0359 (14)0.0399 (15)0.0069 (11)0.0032 (11)−0.0039 (12)
C180.0296 (11)0.0358 (14)0.0429 (15)0.0048 (11)0.0025 (11)−0.0080 (12)
C190.0429 (13)0.0549 (17)0.066 (2)0.0190 (13)0.0163 (14)−0.0062 (15)
C200.0542 (15)0.0575 (18)0.083 (2)0.0327 (14)0.0162 (16)−0.0032 (17)
C210.0596 (15)0.0522 (17)0.070 (2)0.0339 (13)0.0009 (16)0.0024 (16)
C220.0548 (15)0.0467 (16)0.0481 (17)0.0232 (13)0.0015 (14)0.0013 (14)
Ni1—O12.0295 (17)C2—H20.9300
Ni1—O22.0410 (17)C3—C41.383 (4)
Ni1—N22.057 (2)C3—H30.9300
Ni1—N12.080 (2)C4—C51.386 (4)
Ni1—N42.1435 (19)C4—H40.9300
Ni1—N32.1900 (18)C5—C61.481 (3)
Ni2—O21.8278 (17)C6—N8i1.333 (3)
Ni2—N81.836 (2)C7—C81.381 (4)
Ni2—N51.860 (2)C7—H70.9300
Ni2—N71.888 (2)C8—C91.368 (4)
N1—C11.335 (3)C8—H8A0.9300
N1—C51.339 (3)C9—C101.367 (4)
N2—C61.303 (3)C9—H90.9300
N2—O2i1.414 (3)C10—C111.378 (4)
N3—C111.331 (3)C10—H100.9300
N3—C71.336 (3)C11—H110.9300
N4—C161.321 (3)C12—C131.367 (4)
N4—C121.330 (3)C12—H120.9300
N5—C171.306 (3)C13—C141.366 (5)
N5—O11.350 (3)C13—H130.9300
N6—C171.360 (3)C14—C151.354 (5)
N6—H6B0.843 (15)C14—H140.9300
N6—H6A0.851 (16)C15—C161.380 (4)
N7—C221.347 (3)C15—H150.9300
N7—C181.373 (3)C16—H160.9300
N8—C6i1.333 (3)C17—C181.446 (4)
N8—H80.8600C18—C191.391 (4)
N9—O41.209 (4)C19—C201.381 (4)
N9—O51.214 (4)C19—H190.9300
N9—O31.217 (3)C20—C211.368 (5)
O2—N2i1.414 (3)C20—H200.9300
C1—C21.380 (4)C21—C221.376 (4)
C1—H10.9300C21—H210.9300
C2—C31.378 (4)C22—H220.9300
O1—Ni1—O287.43 (7)C2—C3—H3120.2
O1—Ni1—N2173.84 (8)C4—C3—H3120.2
O2—Ni1—N298.68 (7)C3—C4—C5118.3 (3)
O1—Ni1—N195.46 (8)C3—C4—H4120.8
O2—Ni1—N1176.94 (7)C5—C4—H4120.8
N2—Ni1—N178.42 (8)N1—C5—C4122.4 (2)
O1—Ni1—N486.65 (7)N1—C5—C6115.2 (2)
O2—Ni1—N490.52 (7)C4—C5—C6122.4 (2)
N2—Ni1—N492.45 (8)N2—C6—N8i120.5 (2)
N1—Ni1—N488.65 (8)N2—C6—C5115.1 (2)
O1—Ni1—N385.71 (7)N8i—C6—C5124.5 (2)
O2—Ni1—N392.71 (7)N3—C7—C8123.0 (3)
N2—Ni1—N394.77 (8)N3—C7—H7118.5
N1—Ni1—N388.52 (7)C8—C7—H7118.5
N4—Ni1—N3171.56 (8)C9—C8—C7119.1 (3)
O2—Ni2—N884.38 (8)C9—C8—H8A120.5
O2—Ni2—N591.50 (8)C7—C8—H8A120.5
N8—Ni2—N5174.27 (9)C10—C9—C8118.7 (3)
O2—Ni2—N7172.23 (8)C10—C9—H9120.7
N8—Ni2—N7100.57 (9)C8—C9—H9120.7
N5—Ni2—N783.96 (9)C9—C10—C11118.9 (3)
C1—N1—C5118.4 (2)C9—C10—H10120.6
C1—N1—Ni1127.43 (19)C11—C10—H10120.6
C5—N1—Ni1114.07 (16)N3—C11—C10123.4 (3)
C6—N2—O2i109.62 (19)N3—C11—H11118.3
C6—N2—Ni1115.76 (16)C10—C11—H11118.3
O2i—N2—Ni1132.58 (14)N4—C12—C13123.4 (3)
C11—N3—C7116.9 (2)N4—C12—H12118.3
C11—N3—Ni1119.41 (17)C13—C12—H12118.3
C7—N3—Ni1122.75 (16)C14—C13—C12118.7 (3)
C16—N4—C12117.3 (2)C14—C13—H13120.7
C16—N4—Ni1120.50 (18)C12—C13—H13120.7
C12—N4—Ni1122.16 (16)C15—C14—C13118.7 (3)
C17—N5—O1117.4 (2)C15—C14—H14120.7
C17—N5—Ni2116.46 (18)C13—C14—H14120.7
O1—N5—Ni2126.15 (15)C14—C15—C16119.5 (3)
C17—N6—H6B115.2 (18)C14—C15—H15120.2
C17—N6—H6A125.6 (16)C16—C15—H15120.2
H6B—N6—H6A111 (2)N4—C16—C15122.4 (3)
C22—N7—C18118.8 (2)N4—C16—H16118.8
C22—N7—Ni2128.23 (19)C15—C16—H16118.8
C18—N7—Ni2112.85 (17)N5—C17—N6122.5 (2)
C6i—N8—Ni2111.45 (17)N5—C17—C18113.5 (2)
C6i—N8—H8124.3N6—C17—C18123.9 (2)
Ni2—N8—H8124.3N7—C18—C19120.8 (3)
O4—N9—O5116.9 (3)N7—C18—C17113.1 (2)
O4—N9—O3121.9 (3)C19—C18—C17126.1 (3)
O5—N9—O3120.3 (3)C20—C19—C18119.3 (3)
N5—O1—Ni1112.62 (13)C20—C19—H19120.4
N2i—O2—Ni2114.03 (13)C18—C19—H19120.4
N2i—O2—Ni1127.93 (13)C21—C20—C19119.4 (3)
Ni2—O2—Ni1117.72 (8)C21—C20—H20120.3
N1—C1—C2122.7 (3)C19—C20—H20120.3
N1—C1—H1118.6C20—C21—C22120.0 (3)
C2—C1—H1118.6C20—C21—H21120.0
C3—C2—C1118.5 (3)C22—C21—H21120.0
C3—C2—H2120.8N7—C22—C21121.8 (3)
C1—C2—H2120.8N7—C22—H22119.1
C2—C3—C4119.5 (3)C21—C22—H22119.1
  5 in total

1.  Ferromagnetic manganese "cubes": from PSII to single-molecule magnets.

Authors:  Ross Inglis; Constantinos C Stoumpos; Alessandro Prescimone; Milosz Siczek; Tadeusz Lis; Wolfgang Wernsdorfer; Euan K Brechin; Constantinos J Milios
Journal:  Dalton Trans       Date:  2010-05-28       Impact factor: 4.390

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Ferromagnetic coupling in oximato-bridged multi-decker Ni(II) clusters.

Authors:  Hui-Zhong Kou; Guang-Yu An; Cong-Min Ji; Bing-Wu Wang; Ai-Li Cui
Journal:  Dalton Trans       Date:  2010-08-27       Impact factor: 4.390

4.  Using pyridine amidoximes in 3d-metal cluster chemistry: a novel ferromagnetic Ni12 complex from the use of pyridine-2-amidoxime.

Authors:  Constantina Papatriantafyllopoulou; Leigh F Jones; Tuyen D Nguyen; Nuria Matamoros-Salvador; Luís Cunha-Silva; Filipe A Almeida Paz; João Rocha; Marco Evangelisti; Euan K Brechin; Spyros P Perlepes
Journal:  Dalton Trans       Date:  2008-04-16       Impact factor: 4.390

5.  Bis(μ(2)-pyridine-2-carboxamide oximato)bis-[(pyridine-2-carboxamide oxime)zinc] dinitrate.

Authors:  Xiao-Hui Deng; Jing-Wen Ran
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-31
  5 in total

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