| Literature DB >> 22058897 |
Abstract
In the title dinuclear compound, [Zn(2)(C(6)H(6)N(3)O)(2)(C(6)H(7)N(3)O)(2)](NO(3))(2), the Zn(II) cation is N,N'-chelated by one pyridine-2-carboxamide oximate anion and one pyridine-2-carboxamide oxime mol-ecule, and is further bridged by an oxime O atom from the adjacent pyridine-2-carboxamide oximate anion, forming a distorted trigonal bipyramidal coordination. Two pyridine-2-carboxamide oximate anions bridge two Zn(II) cations to form the centrosymmetric dinuclear mol-ecule. Extensive O-H⋯O, N-H⋯O and O-H⋯N hydrogen bonds are present in the crystal structure.Entities:
Year: 2011 PMID: 22058897 PMCID: PMC3200762 DOI: 10.1107/S1600536811034908
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn2(C6H6N3O)2(C6H7N3O)2](NO3)2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 2632 reflections |
| θ = 1.8–25.1° | |
| µ = 1.70 mm−1 | |
| β = 106.794 (2)° | Block, yellow |
| 0.51 × 0.48 × 0.39 mm | |
| Bruker SMART 1000 CCD area-detector diffractometer | 2632 independent reflections |
| Radiation source: fine-focus sealed tube | 2297 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.1°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 8302 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2632 reflections | (Δ/σ)max = 0.001 |
| 209 parameters | Δρmax = 1.43 e Å−3 |
| 0 restraints | Δρmin = −0.97 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Zn1 | 0.46944 (6) | 0.437379 (19) | 0.86499 (5) | 0.02829 (17) | |
| O2 | 0.3307 (4) | 0.44030 (11) | 1.0158 (3) | 0.0305 (6) | |
| N6 | 0.5478 (4) | 0.52822 (14) | 0.8642 (3) | 0.0279 (7) | |
| O1 | 0.8933 (4) | 0.45773 (13) | 1.0281 (4) | 0.0412 (7) | |
| H1 | 0.8498 | 0.4919 | 1.0208 | 0.062* | |
| C12 | 0.4742 (5) | 0.55977 (16) | 0.7481 (4) | 0.0290 (8) | |
| N3 | 0.7493 (5) | 0.41671 (15) | 0.9631 (4) | 0.0326 (7) | |
| C11 | 0.3546 (5) | 0.52544 (17) | 0.6194 (4) | 0.0302 (8) | |
| N1 | 0.4877 (5) | 0.34274 (15) | 0.8238 (4) | 0.0321 (7) | |
| N4 | 0.3239 (5) | 0.46677 (15) | 0.6470 (4) | 0.0311 (7) | |
| N5 | 0.5021 (6) | 0.61900 (15) | 0.7361 (4) | 0.0465 (10) | |
| H5A | 0.5739 | 0.6385 | 0.8099 | 0.056* | |
| H5B | 0.4482 | 0.6375 | 0.6547 | 0.056* | |
| N7 | 0.6922 (6) | 0.77875 (19) | 0.9401 (5) | 0.0590 (5) | |
| N2 | 0.9964 (5) | 0.35112 (17) | 0.9759 (4) | 0.0429 (9) | |
| H2A | 1.0797 | 0.3778 | 1.0161 | 0.051* | |
| H2B | 1.0309 | 0.3156 | 0.9583 | 0.051* | |
| C5 | 0.6647 (5) | 0.32001 (17) | 0.8733 (4) | 0.0298 (8) | |
| C8 | 0.1400 (7) | 0.4564 (2) | 0.3942 (5) | 0.0431 (11) | |
| H8 | 0.0665 | 0.4321 | 0.3194 | 0.052* | |
| C10 | 0.2807 (6) | 0.55061 (19) | 0.4812 (5) | 0.0383 (10) | |
| H10 | 0.3038 | 0.5908 | 0.4647 | 0.046* | |
| C6 | 0.8138 (5) | 0.36488 (17) | 0.9409 (4) | 0.0298 (8) | |
| O5 | 0.8612 (5) | 0.78443 (16) | 1.0109 (4) | 0.0590 (5) | |
| O3 | 0.5941 (5) | 0.82406 (15) | 0.9079 (4) | 0.0590 (5) | |
| O4 | 0.6244 (5) | 0.72889 (15) | 0.9025 (4) | 0.0590 (5) | |
| C7 | 0.2194 (7) | 0.43374 (19) | 0.5347 (5) | 0.0406 (10) | |
| H7 | 0.1992 | 0.3934 | 0.5520 | 0.049* | |
| C4 | 0.7013 (7) | 0.25955 (19) | 0.8636 (5) | 0.0402 (10) | |
| H4 | 0.8237 | 0.2449 | 0.8987 | 0.048* | |
| C3 | 0.5540 (7) | 0.22116 (19) | 0.8011 (5) | 0.0462 (11) | |
| H3 | 0.5762 | 0.1803 | 0.7922 | 0.055* | |
| C9 | 0.1715 (6) | 0.5154 (2) | 0.3668 (5) | 0.0431 (11) | |
| H9 | 0.1203 | 0.5317 | 0.2729 | 0.052* | |
| C1 | 0.3466 (6) | 0.30447 (19) | 0.7682 (5) | 0.0380 (10) | |
| H1A | 0.2242 | 0.3194 | 0.7389 | 0.046* | |
| C2 | 0.3739 (7) | 0.2436 (2) | 0.7522 (5) | 0.0428 (11) | |
| H2 | 0.2727 | 0.2184 | 0.7092 | 0.051* |
| Zn1 | 0.0276 (3) | 0.0250 (3) | 0.0300 (3) | 0.00004 (17) | 0.00468 (19) | −0.00044 (17) |
| O2 | 0.0287 (14) | 0.0296 (14) | 0.0315 (14) | −0.0055 (11) | 0.0062 (12) | −0.0041 (11) |
| N6 | 0.0281 (16) | 0.0260 (16) | 0.0276 (17) | −0.0017 (13) | 0.0049 (13) | −0.0021 (13) |
| O1 | 0.0293 (15) | 0.0309 (15) | 0.0560 (19) | −0.0054 (12) | 0.0003 (14) | −0.0053 (14) |
| C12 | 0.030 (2) | 0.0242 (18) | 0.033 (2) | 0.0029 (15) | 0.0079 (17) | −0.0004 (15) |
| N3 | 0.0253 (17) | 0.0295 (17) | 0.0394 (19) | −0.0038 (14) | 0.0039 (14) | −0.0009 (14) |
| C11 | 0.029 (2) | 0.0298 (19) | 0.032 (2) | 0.0051 (16) | 0.0094 (16) | 0.0001 (16) |
| N1 | 0.0302 (17) | 0.0287 (17) | 0.0348 (18) | −0.0006 (14) | 0.0053 (14) | −0.0003 (14) |
| N4 | 0.0341 (18) | 0.0279 (16) | 0.0286 (17) | 0.0006 (14) | 0.0048 (14) | −0.0003 (13) |
| N5 | 0.061 (3) | 0.0255 (18) | 0.042 (2) | −0.0020 (17) | −0.0027 (19) | 0.0038 (15) |
| N7 | 0.0512 (11) | 0.0453 (9) | 0.0727 (13) | −0.0021 (8) | 0.0056 (9) | −0.0090 (9) |
| N2 | 0.0279 (18) | 0.0374 (19) | 0.059 (2) | 0.0032 (15) | 0.0050 (17) | −0.0044 (17) |
| C5 | 0.033 (2) | 0.0289 (19) | 0.029 (2) | 0.0016 (16) | 0.0098 (16) | 0.0010 (16) |
| C8 | 0.045 (3) | 0.046 (3) | 0.033 (2) | −0.002 (2) | 0.0034 (19) | −0.0070 (19) |
| C10 | 0.043 (2) | 0.035 (2) | 0.037 (2) | 0.0052 (18) | 0.0099 (19) | 0.0056 (18) |
| C6 | 0.029 (2) | 0.030 (2) | 0.029 (2) | 0.0030 (16) | 0.0057 (16) | 0.0052 (16) |
| O5 | 0.0512 (11) | 0.0453 (9) | 0.0727 (13) | −0.0021 (8) | 0.0056 (9) | −0.0090 (9) |
| O3 | 0.0512 (11) | 0.0453 (9) | 0.0727 (13) | −0.0021 (8) | 0.0056 (9) | −0.0090 (9) |
| O4 | 0.0512 (11) | 0.0453 (9) | 0.0727 (13) | −0.0021 (8) | 0.0056 (9) | −0.0090 (9) |
| C7 | 0.046 (3) | 0.032 (2) | 0.037 (2) | −0.0053 (18) | 0.002 (2) | −0.0044 (18) |
| C4 | 0.044 (2) | 0.033 (2) | 0.043 (3) | 0.0053 (18) | 0.011 (2) | 0.0009 (18) |
| C3 | 0.061 (3) | 0.028 (2) | 0.048 (3) | 0.000 (2) | 0.013 (2) | −0.0053 (19) |
| C9 | 0.043 (3) | 0.051 (3) | 0.032 (2) | 0.006 (2) | 0.0056 (19) | 0.0050 (19) |
| C1 | 0.035 (2) | 0.038 (2) | 0.038 (2) | −0.0052 (18) | 0.0059 (18) | 0.0014 (18) |
| C2 | 0.050 (3) | 0.039 (2) | 0.038 (2) | −0.015 (2) | 0.010 (2) | −0.0048 (19) |
| Zn1—O2 | 1.981 (3) | N7—O4 | 1.225 (5) |
| Zn1—N1 | 2.148 (3) | N7—O5 | 1.244 (5) |
| Zn1—N3 | 2.064 (3) | N2—C6 | 1.333 (5) |
| Zn1—N4 | 2.128 (3) | N2—H2A | 0.8600 |
| Zn1—N6 | 2.099 (3) | N2—H2B | 0.8600 |
| O2—N6i | 1.411 (4) | C5—C4 | 1.378 (6) |
| N6—C12 | 1.281 (5) | C5—C6 | 1.487 (5) |
| N6—O2i | 1.411 (4) | C8—C9 | 1.368 (7) |
| O1—N3 | 1.402 (4) | C8—C7 | 1.379 (6) |
| O1—H1 | 0.8200 | C8—H8 | 0.9300 |
| C12—N5 | 1.341 (5) | C10—C9 | 1.386 (6) |
| C12—C11 | 1.489 (5) | C10—H10 | 0.9300 |
| N3—C6 | 1.286 (5) | C7—H7 | 0.9300 |
| C11—N4 | 1.361 (5) | C4—C3 | 1.376 (6) |
| C11—C10 | 1.377 (6) | C4—H4 | 0.9300 |
| N1—C1 | 1.332 (5) | C3—C2 | 1.374 (7) |
| N1—C5 | 1.357 (5) | C3—H3 | 0.9300 |
| N4—C7 | 1.336 (5) | C9—H9 | 0.9300 |
| N5—H5A | 0.8600 | C1—C2 | 1.381 (6) |
| N5—H5B | 0.8600 | C1—H1A | 0.9300 |
| N7—O3 | 1.227 (5) | C2—H2 | 0.9300 |
| O2—Zn1—N3 | 110.42 (13) | O4—N7—O5 | 120.8 (4) |
| O2—Zn1—N6 | 99.93 (12) | C6—N2—H2A | 120.0 |
| N3—Zn1—N6 | 88.39 (13) | C6—N2—H2B | 120.0 |
| O2—Zn1—N4 | 117.30 (12) | H2A—N2—H2B | 120.0 |
| N3—Zn1—N4 | 131.62 (14) | N1—C5—C4 | 121.9 (4) |
| N6—Zn1—N4 | 76.45 (12) | N1—C5—C6 | 115.0 (3) |
| O2—Zn1—N1 | 103.55 (12) | C4—C5—C6 | 123.0 (4) |
| N3—Zn1—N1 | 75.87 (13) | C9—C8—C7 | 118.8 (4) |
| N6—Zn1—N1 | 155.12 (13) | C9—C8—H8 | 120.6 |
| N4—Zn1—N1 | 99.58 (13) | C7—C8—H8 | 120.6 |
| N6i—O2—Zn1 | 104.3 (2) | C9—C10—C11 | 119.3 (4) |
| C12—N6—O2i | 115.4 (3) | C9—C10—H10 | 120.3 |
| C12—N6—Zn1 | 118.6 (3) | C11—C10—H10 | 120.3 |
| O2i—N6—Zn1 | 125.9 (2) | N3—C6—N2 | 124.3 (4) |
| N3—O1—H1 | 109.5 | N3—C6—C5 | 113.8 (3) |
| N6—C12—N5 | 124.8 (4) | N2—C6—C5 | 121.9 (4) |
| N6—C12—C11 | 115.0 (3) | N4—C7—C8 | 123.3 (4) |
| N5—C12—C11 | 120.2 (4) | N4—C7—H7 | 118.3 |
| C6—N3—O1 | 112.4 (3) | C8—C7—H7 | 118.3 |
| C6—N3—Zn1 | 119.9 (3) | C5—C4—C3 | 119.0 (4) |
| O1—N3—Zn1 | 126.2 (2) | C5—C4—H4 | 120.5 |
| N4—C11—C10 | 121.8 (4) | C3—C4—H4 | 120.5 |
| N4—C11—C12 | 115.3 (3) | C2—C3—C4 | 119.5 (4) |
| C10—C11—C12 | 122.9 (4) | C2—C3—H3 | 120.2 |
| C1—N1—C5 | 118.0 (3) | C4—C3—H3 | 120.2 |
| C1—N1—Zn1 | 127.7 (3) | C8—C9—C10 | 119.1 (4) |
| C5—N1—Zn1 | 114.0 (2) | C8—C9—H9 | 120.4 |
| C7—N4—C11 | 117.7 (3) | C10—C9—H9 | 120.4 |
| C7—N4—Zn1 | 127.8 (3) | N1—C1—C2 | 123.0 (4) |
| C11—N4—Zn1 | 114.3 (2) | N1—C1—H1A | 118.5 |
| C12—N5—H5A | 120.0 | C2—C1—H1A | 118.5 |
| C12—N5—H5B | 120.0 | C3—C2—C1 | 118.5 (4) |
| H5A—N5—H5B | 120.0 | C3—C2—H2 | 120.8 |
| O3—N7—O4 | 120.3 (4) | C1—C2—H2 | 120.8 |
| O3—N7—O5 | 118.9 (4) | ||
| N3—Zn1—O2—N6i | 43.2 (2) | C12—C11—N4—C7 | −179.2 (4) |
| N6—Zn1—O2—N6i | −48.8 (2) | C10—C11—N4—Zn1 | 175.9 (3) |
| N4—Zn1—O2—N6i | −128.6 (2) | C12—C11—N4—Zn1 | −3.6 (4) |
| N1—Zn1—O2—N6i | 123.0 (2) | O2—Zn1—N4—C7 | −90.2 (4) |
| O2—Zn1—N6—C12 | −112.5 (3) | N3—Zn1—N4—C7 | 100.1 (4) |
| N3—Zn1—N6—C12 | 137.0 (3) | N6—Zn1—N4—C7 | 175.4 (4) |
| N4—Zn1—N6—C12 | 3.4 (3) | N1—Zn1—N4—C7 | 20.5 (4) |
| N1—Zn1—N6—C12 | 86.9 (4) | O2—Zn1—N4—C11 | 94.8 (3) |
| O2—Zn1—N6—O2i | 64.1 (3) | N3—Zn1—N4—C11 | −74.9 (3) |
| N3—Zn1—N6—O2i | −46.3 (3) | N6—Zn1—N4—C11 | 0.4 (3) |
| N4—Zn1—N6—O2i | −180.0 (3) | N1—Zn1—N4—C11 | −154.5 (3) |
| N1—Zn1—N6—O2i | −96.5 (4) | C1—N1—C5—C4 | 1.8 (6) |
| O2i—N6—C12—N5 | −1.5 (6) | Zn1—N1—C5—C4 | 176.4 (3) |
| Zn1—N6—C12—N5 | 175.5 (3) | C1—N1—C5—C6 | −177.0 (4) |
| O2i—N6—C12—C11 | 176.8 (3) | Zn1—N1—C5—C6 | −2.4 (4) |
| Zn1—N6—C12—C11 | −6.3 (5) | N4—C11—C10—C9 | 0.2 (7) |
| O2—Zn1—N3—C6 | 109.2 (3) | C12—C11—C10—C9 | 179.6 (4) |
| N6—Zn1—N3—C6 | −150.8 (3) | O1—N3—C6—N2 | 0.3 (6) |
| N4—Zn1—N3—C6 | −80.6 (3) | Zn1—N3—C6—N2 | 167.2 (3) |
| N1—Zn1—N3—C6 | 9.7 (3) | O1—N3—C6—C5 | 179.5 (3) |
| O2—Zn1—N3—O1 | −86.0 (3) | Zn1—N3—C6—C5 | −13.7 (5) |
| N6—Zn1—N3—O1 | 14.0 (3) | N1—C5—C6—N3 | 10.2 (5) |
| N4—Zn1—N3—O1 | 84.3 (3) | C4—C5—C6—N3 | −168.6 (4) |
| N1—Zn1—N3—O1 | 174.6 (3) | N1—C5—C6—N2 | −170.7 (4) |
| N6—C12—C11—N4 | 6.5 (5) | C4—C5—C6—N2 | 10.6 (6) |
| N5—C12—C11—N4 | −175.1 (4) | C11—N4—C7—C8 | −1.0 (7) |
| N6—C12—C11—C10 | −173.0 (4) | Zn1—N4—C7—C8 | −175.8 (4) |
| N5—C12—C11—C10 | 5.4 (6) | C9—C8—C7—N4 | 1.1 (8) |
| O2—Zn1—N1—C1 | 62.8 (4) | N1—C5—C4—C3 | 0.4 (7) |
| N3—Zn1—N1—C1 | 170.8 (4) | C6—C5—C4—C3 | 179.0 (4) |
| N6—Zn1—N1—C1 | −136.9 (4) | C5—C4—C3—C2 | −1.1 (7) |
| N4—Zn1—N1—C1 | −58.5 (4) | C7—C8—C9—C10 | −0.5 (7) |
| O2—Zn1—N1—C5 | −111.2 (3) | C11—C10—C9—C8 | −0.1 (7) |
| N3—Zn1—N1—C5 | −3.2 (3) | C5—N1—C1—C2 | −3.3 (6) |
| N6—Zn1—N1—C5 | 49.1 (5) | Zn1—N1—C1—C2 | −177.1 (3) |
| N4—Zn1—N1—C5 | 127.5 (3) | C4—C3—C2—C1 | −0.4 (7) |
| C10—C11—N4—C7 | 0.3 (6) | N1—C1—C2—C3 | 2.6 (7) |
| H··· | ||||
| O1—H1···O2i | 0.82 | 1.98 | 2.767 (4) | 162. |
| O1—H1···N6 | 0.82 | 2.43 | 3.018 (4) | 129. |
| N2—H2A···O2ii | 0.86 | 2.32 | 3.108 (5) | 152. |
| N2—H2B···O5iii | 0.86 | 2.35 | 3.180 (5) | 162. |
| N5—H5A···O4 | 0.86 | 2.18 | 2.900 (5) | 142. |
| N5—H5B···O5iv | 0.86 | 2.18 | 2.985 (5) | 156. |
Selected bond lengths (Å)
| Zn1—O2 | 1.981 (3) |
| Zn1—N1 | 2.148 (3) |
| Zn1—N3 | 2.064 (3) |
| Zn1—N4 | 2.128 (3) |
| Zn1—N6 | 2.099 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯O2i | 0.82 | 1.98 | 2.767 (4) | 162 |
| O1—H1⋯N6 | 0.82 | 2.43 | 3.018 (4) | 129 |
| N2—H2 | 0.86 | 2.32 | 3.108 (5) | 152 |
| N2—H2 | 0.86 | 2.35 | 3.180 (5) | 162 |
| N5—H5 | 0.86 | 2.18 | 2.900 (5) | 142 |
| N5—H5 | 0.86 | 2.18 | 2.985 (5) | 156 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .