Literature DB >> 22255945

3D Slicer as a tool for interactive brain tumor segmentation.

Ron Kikinis1, Steve Pieper.   

Abstract

User interaction is required for reliable segmentation of brain tumors in clinical practice and in clinical research. By incorporating current research tools, 3D Slicer provides a set of interactive, easy to use tools that can be efficiently used for this purpose. One of the modules of 3D Slicer is an interactive editor tool, which contains a variety of interactive segmentation effects. Use of these effects for fast and reproducible segmentation of a single glioblastoma from magnetic resonance imaging data is demonstrated. The innovation in this work lies not in the algorithm, but in the accessibility of the algorithm because of its integration into a software platform that is practical for research in a clinical setting.

Entities:  

Mesh:

Year:  2011        PMID: 22255945      PMCID: PMC3991434          DOI: 10.1109/IEMBS.2011.6091765

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  1 in total

1.  Interactive diffusion tensor tractography visualization for neurosurgical planning.

Authors:  Alexandra J Golby; Gordon Kindlmann; Isaiah Norton; Alexander Yarmarkovich; Steven Pieper; Ron Kikinis
Journal:  Neurosurgery       Date:  2011-02       Impact factor: 4.654

  1 in total
  24 in total

1.  Design and initial evaluation of a treatment planning software system for MRI-guided laser ablation in the brain.

Authors:  E Yeniaras; D T Fuentes; S J Fahrenholtz; J S Weinberg; F Maier; J D Hazle; R J Stafford
Journal:  Int J Comput Assist Radiol Surg       Date:  2013-10-05       Impact factor: 2.924

2.  The efficacy of neuroendoscopic treatment for middle cranial fossa arachnoid cysts assessed by MRI 3D segmentation and modeling.

Authors:  Ye Li; Xiaolei Chen; Bainan Xu
Journal:  Childs Nerv Syst       Date:  2013-11-21       Impact factor: 1.475

3.  Prognostic Molecular and Imaging Biomarkers in Primary Glioblastoma.

Authors:  Edit Bosnyák; Sharon K Michelhaugh; Neil V Klinger; David O Kamson; Geoffrey R Barger; Sandeep Mittal; Csaba Juhász
Journal:  Clin Nucl Med       Date:  2017-05       Impact factor: 7.794

4.  Tryptophan PET predicts spatial and temporal patterns of post-treatment glioblastoma progression detected by contrast-enhanced MRI.

Authors:  Edit Bosnyák; David O Kamson; Natasha L Robinette; Geoffrey R Barger; Sandeep Mittal; Csaba Juhász
Journal:  J Neurooncol       Date:  2015-10-29       Impact factor: 4.130

5.  A resting state fMRI analysis pipeline for pooling inference across diverse cohorts: an ENIGMA rs-fMRI protocol.

Authors:  Bhim M Adhikari; Neda Jahanshad; Dinesh Shukla; Jessica Turner; Dominik Grotegerd; Udo Dannlowski; Harald Kugel; Jennifer Engelen; Bruno Dietsche; Axel Krug; Tilo Kircher; Els Fieremans; Jelle Veraart; Dmitry S Novikov; Premika S W Boedhoe; Ysbrand D van der Werf; Odile A van den Heuvel; Jonathan Ipser; Anne Uhlmann; Dan J Stein; Erin Dickie; Aristotle N Voineskos; Anil K Malhotra; Fabrizio Pizzagalli; Vince D Calhoun; Lea Waller; Ilja M Veer; Hernik Walter; Robert W Buchanan; David C Glahn; L Elliot Hong; Paul M Thompson; Peter Kochunov
Journal:  Brain Imaging Behav       Date:  2019-10       Impact factor: 3.978

6.  Electroencephalographic inverse localization of brain activity in acute traumatic brain injury as a guide to surgery, monitoring and treatment.

Authors:  Andrei Irimia; S-Y Matthew Goh; Carinna M Torgerson; Nathan R Stein; Micah C Chambers; Paul M Vespa; John D Van Horn
Journal:  Clin Neurol Neurosurg       Date:  2013-08-12       Impact factor: 1.876

7.  Morphological and Volumetric Assessment of Cerebral Ventricular System with 3D Slicer Software.

Authors:  Miguel Gonzalo Domínguez; Cristina Hernández; Pablo Ruisoto; Juan A Juanes; Alberto Prats; Tomás Hernández
Journal:  J Med Syst       Date:  2016-05-05       Impact factor: 4.460

8.  Advantages and Disadvantages in Image Processing with Free Software in Radiology.

Authors:  Katrin Muradas Mujika; Juan Antonio Juanes Méndez; Andrés Framiñan de Miguel
Journal:  J Med Syst       Date:  2018-01-15       Impact factor: 4.460

9.  Tryptophan PET in pretreatment delineation of newly-diagnosed gliomas: MRI and histopathologic correlates.

Authors:  David O Kamson; Csaba Juhász; Amy Buth; William J Kupsky; Geoffrey R Barger; Pulak K Chakraborty; Otto Muzik; Sandeep Mittal
Journal:  J Neurooncol       Date:  2013-01-09       Impact factor: 4.130

10.  Molecular imaging correlates of tryptophan metabolism via the kynurenine pathway in human meningiomas.

Authors:  Edit Bosnyák; David O Kamson; Anthony R Guastella; Kaushik Varadarajan; Natasha L Robinette; William J Kupsky; Otto Muzik; Sharon K Michelhaugh; Sandeep Mittal; Csaba Juhász
Journal:  Neuro Oncol       Date:  2015-06-18       Impact factor: 12.300

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