Literature DB >> 22253092

An epigenetic integrator: new insights into genome regulation, environmental stress responses and developmental controls by histone deacetylase 6.

Jong-Myong Kim1, Taiko Kim To, Motoaki Seki.   

Abstract

Histone acetylation ranks with DNA methylation as one of major epigenetic modifications in eukaryotes. Deacetylation of histone N-terminal tails is intimately correlated with gene silencing and heterochromatin formation. In Arabidopsis, histone deacetylase 6 (HDA6) is a well-studied histone deacetylase that functions in gene silencing. Recently, it has been reported that HDA6 cooperates with DNA methylation on its direct target locus in the gene silencing mechanism. HDA6 has the multifaceted role in regulation of genome maintenance, development and environmental stress responses in plants. Elucidation of HDA6 function provides important information for understanding of epigenetic regulation in plants. In this review, we highlight recent progress in elucidating the HDA6-mediated gene silencing mechanisms and deciphering the biological function of HDA6.

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Year:  2012        PMID: 22253092     DOI: 10.1093/pcp/pcs004

Source DB:  PubMed          Journal:  Plant Cell Physiol        ISSN: 0032-0781            Impact factor:   4.927


  29 in total

1.  Opening the door to epigenetics in PCP.

Authors:  Tetsu Kinoshita; Steven E Jacobsen
Journal:  Plant Cell Physiol       Date:  2012-05       Impact factor: 4.927

2.  Tomato Yellow Leaf Curl Virus V2 Interacts with Host Histone Deacetylase 6 To Suppress Methylation-Mediated Transcriptional Gene Silencing in Plants.

Authors:  Bi Wang; Xiuling Yang; Yaqin Wang; Yan Xie; Xueping Zhou
Journal:  J Virol       Date:  2018-08-29       Impact factor: 5.103

Review 3.  Epigenetic regulation in plants.

Authors:  Craig S Pikaard; Ortrun Mittelsten Scheid
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-12-01       Impact factor: 10.005

4.  Histone deacetylase complex1 expression level titrates plant growth and abscisic acid sensitivity in Arabidopsis.

Authors:  Giorgio Perrella; Manuel A Lopez-Vernaza; Craig Carr; Emanuela Sani; Veronique Gosselé; Christoph Verduyn; Fabian Kellermeier; Matthew A Hannah; Anna Amtmann
Journal:  Plant Cell       Date:  2013-09-20       Impact factor: 11.277

5.  Intracellular localization of histone deacetylase HDA6 in plants.

Authors:  Kazuki Kurita; Yuki Sakamoto; Sota Naruse; Tomoko M Matsunaga; Hideyuki Arata; Tetsuya Higashiyama; Yoshiki Habu; Yoshinori Utsumi; Chikako Utsumi; Maho Tanaka; Satoshi Takahashi; Jong-Myong Kim; Motoaki Seki; Takuya Sakamoto; Sachihiro Matsunaga
Journal:  J Plant Res       Date:  2019-07-23       Impact factor: 2.629

6.  Evaluation of higher plant virus resistance genes in the green alga, Chlorella variabilis NC64A, during the early phase of infection with Paramecium bursaria chlorella virus-1.

Authors:  Janet M Rowe; David D Dunigan; Guillaume Blanc; James R Gurnon; Yuannan Xia; James L Van Etten
Journal:  Virology       Date:  2013-05-21       Impact factor: 3.616

7.  Phosphate starvation induces DNA methylation in the vicinity of cis-acting elements known to regulate the expression of phosphate-responsive genes.

Authors:  Lenin Yong-Villalobos; Sergio Alan Cervantes-Pérez; Dolores Gutiérrez-Alanis; Sandra Gonzáles-Morales; Octavio Martínez; Luis Herrera-Estrella
Journal:  Plant Signal Behav       Date:  2016-05-03

8.  High-resolution mapping of H4K16 and H3K23 acetylation reveals conserved and unique distribution patterns in Arabidopsis and rice.

Authors:  Li Lu; Xiangsong Chen; Dean Sanders; Shuiming Qian; Xuehua Zhong
Journal:  Epigenetics       Date:  2015       Impact factor: 4.528

9.  Chromatin-dependent repression of the Arabidopsis floral integrator genes involves plant specific PHD-containing proteins.

Authors:  Leticia López-González; Alfonso Mouriz; Laura Narro-Diego; Regla Bustos; José Miguel Martínez-Zapater; Jose A Jarillo; Manuel Piñeiro
Journal:  Plant Cell       Date:  2014-10-03       Impact factor: 11.277

10.  The Distinct Roles of Class I and II RPD3-Like Histone Deacetylases in Salinity Stress Response.

Authors:  Minoru Ueda; Akihiro Matsui; Maho Tanaka; Tomoe Nakamura; Takahiro Abe; Kaori Sako; Taku Sasaki; Jong-Myong Kim; Akihiro Ito; Norikazu Nishino; Hiroaki Shimada; Minoru Yoshida; Motoaki Seki
Journal:  Plant Physiol       Date:  2017-10-10       Impact factor: 8.340

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