Literature DB >> 22228667

Enteractinococcus coprophilus gen. nov., sp. nov., of the family Micrococcaceae, isolated from Panthera tigris amoyensis faeces, and transfer of Yaniella fodinae Dhanjal et al. 2011 to the genus Enteractinococcus as Enteractinococcus fodinae comb. nov.

Yan-Ru Cao1,2, Yi Jiang1, Rong-Xian Jin1, Li Han3, Wen-Xiang He2, You-Long Li4, Xue-Shi Huang3, Quan-Hong Xue2.   

Abstract

A novel actinobacterium, designated strain YIM 100590(T), was isolated from Panthera tigris amoyensis faeces collected from Yunnan Wild Animal Park in Yunnan province, south-west China. Phylogenetic analysis based on 16S rRNA gene sequence data showed that strain YIM 100590(T) is a member of the family Micrococcaceae. Cells were coccoid to oval (0.7-1.5 µm in diameter) occurring singly or in clusters. Growth was observed at 10-37 °C (optimum 28 °C) and at pH 7.0-11.0 (optimum pH 8.0). The major fatty acids were iso-C(15:0) (32.22%), anteiso-C(15:0) (31.64%) and iso-C(16:0) (17.38%). The peptidoglycan was of A4α type (L-Lys-Gly-L-Glu). The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, phosphatidylinositol mannosides, dimannosyl diacylglycerol, an unknown glycolipid and two unknown phospholipids. The quinone system comprised menaquinones MK-7 (91.9%) and MK-8 (8.3%). The DNA G+C content of strain YIM 100590(T) was 56.2 mol%. Chemotaxonomic data indicated that the strain belongs to the family Micrococcaceae. On the basis of morphological and chemotaxonomic data and phylogenetic analysis, strain YIM 100590(T) is considered to represent a novel species of a new genus within the family Micrococcaceae, for which the name Enteractinococcus coprophilus gen. nov., sp. nov. is proposed. The type strain of Enteractinococcus coprophilus is YIM 100590(T) (=DSM 24083(T)=JCM 17352(T)). Yaniella fodinae DSM 22966(T) was transferred to the new genus as Enteractinococcus fodinae comb. nov. (type strain G5(T)=DSM 22966(T)=JCM 17931(T)=MTCC 9846(T)).

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Year:  2012        PMID: 22228667      PMCID: PMC4080730          DOI: 10.1099/ijs.0.034249-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  16 in total

1.  Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species.

Authors:  Ok-Sun Kim; Yong-Joon Cho; Kihyun Lee; Seok-Hwan Yoon; Mincheol Kim; Hyunsoo Na; Sang-Cheol Park; Yoon Seong Jeon; Jae-Hak Lee; Hana Yi; Sungho Won; Jongsik Chun
Journal:  Int J Syst Evol Microbiol       Date:  2011-11-25       Impact factor: 2.747

2.  MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.

Authors:  Koichiro Tamura; Joel Dudley; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2007-05-07       Impact factor: 16.240

3.  Proposal of Yaniellaceae fam. nov., Yaniella gen. nov. and Sinobaca gen. nov. as replacements for the illegitimate prokaryotic names Yaniaceae Li et al. 2005, Yania Li et al. 2004, emend Li et al. 2005, and Sinococcus Li et al. 2006, respectively.

Authors:  Wen-Jun Li; Xiao-Yang Zhi; Jean P Euzéby
Journal:  Int J Syst Evol Microbiol       Date:  2008-02       Impact factor: 2.747

4.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

5.  Yaniella fodinae sp. nov., isolated from a coal mine.

Authors:  Soniya Dhanjal; Arunachalam Ruckmani; Swaranjit Singh Cameotra; Rüdiger Pukall; Hans-Peter Klenk; Shanmugam Mayilraj
Journal:  Int J Syst Evol Microbiol       Date:  2010-04-09       Impact factor: 2.747

Review 6.  Peptidoglycan types of bacterial cell walls and their taxonomic implications.

Authors:  K H Schleifer; O Kandler
Journal:  Bacteriol Rev       Date:  1972-12

7.  Evolutionary trees from DNA sequences: a maximum likelihood approach.

Authors:  J Felsenstein
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

8.  Proposal of Yaniaceae fam. nov. and Yania flava sp. nov. and emended description of the genus Yania.

Authors:  Wen-Jun Li; Peter Schumann; Yu-Qin Zhang; Ping Xu; Guo-Zhong Chen; Li-Hua Xu; Erko Stackebrandt; Cheng-Lin Jiang
Journal:  Int J Syst Evol Microbiol       Date:  2005-09       Impact factor: 2.747

9.  Georgenia ruanii sp. nov., a novel actinobacterium isolated from forest soil in Yunnan (China), and emended description of the genus Georgenia.

Authors:  Wen-Jun Li; Ping Xu; Peter Schumann; Yu-Qin Zhang; Rüdiger Pukall; Li-Hua Xu; Erko Stackebrandt; Cheng-Lin Jiang
Journal:  Int J Syst Evol Microbiol       Date:  2007-07       Impact factor: 2.747

10.  Yania halotolerans gen. nov., sp. nov., a novel member of the suborder Micrococcineae from saline soil in China.

Authors:  Wen-Jun Li; Hua-Hong Chen; Ping Xu; Yu-Qin Zhang; Peter Schumann; Shu-Kun Tang; Li-Hua Xu; Cheng-Lin Jiang
Journal:  Int J Syst Evol Microbiol       Date:  2004-03       Impact factor: 2.747

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  3 in total

1.  Shotgun metagenome sequencing of a Sudanese toombak snuff tobacco: genetic attributes of a high tobacco-specific nitrosamine containing smokeless tobacco product.

Authors:  R E Tyx; A J Rivera; S B Stanfill; G S Zaatari; C H Watson
Journal:  Lett Appl Microbiol       Date:  2021-12-19       Impact factor: 2.813

Review 2.  Diversity and Applications of Endophytic Actinobacteria of Plants in Special and Other Ecological Niches.

Authors:  Radha Singh; Ashok K Dubey
Journal:  Front Microbiol       Date:  2018-08-08       Impact factor: 5.640

3.  Whole-Genome Sequence of Enteractinococcus helveticum sp. nov. Strain UASWS1574 Isolated from Industrial Used Waters.

Authors:  Julien Crovadore; Gautier Calmin; Romain Chablais; Bastien Cochard; François Lefort
Journal:  Genome Announc       Date:  2016-07-28
  3 in total

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