| Literature DB >> 22227812 |
David Falck1, Jon S B de Vlieger, Martin Giera, Maarten Honing, Hubertus Irth, Wilfried M A Niessen, Jeroen Kool.
Abstract
In this study, an integrated approach is developed for the formation, identification and biological characterization of electrochemical conversion products of p38α mitogen-activated protein kinase inhibitors. This work demonstrates the hyphenation of an electrochemical reaction cell with a continuous-flow bioaffinity assay and parallel LC-HR-MS. Competition of the formed products with a tracer (SKF-86002) that shows fluorescence enhancement in the orthosteric binding site of the p38α kinase is the readout for bioaffinity. Parallel HR-MS(n) experiments provided information on the identity of binders and non-binders. Finally, the data produced with this on-line system were compared to electrochemical conversion products generated off-line. The electrochemical conversion of 1-{6-chloro-5-[(2R,5S)-4-(4-fluorobenzyl)-2,5-dimethylpiperazine-1-carbonyl]-3aH-indol-3-yl}-2-morpholinoethane-1,2-dione resulted in eight products, three of which showed bioaffinity in the continuous-flow p38α bioaffinity assay used. Electrochemical conversion of BIRB796 resulted, amongst others, in the formation of the reactive quinoneimine structure and its corresponding hydroquinone. Both products were detected in the p38α bioaffinity assay, which indicates binding to the p38α kinase.Entities:
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Year: 2012 PMID: 22227812 PMCID: PMC3314180 DOI: 10.1007/s00216-011-5663-2
Source DB: PubMed Journal: Anal Bioanal Chem ISSN: 1618-2642 Impact factor: 4.142
Fig. 1Structures of the kinase inhibitors used for electrochemical conversion experiments
Fig. 2Scheme of the on-line setup. (1) On-line electrochemical conversion of inhibitor. (2) Gradient LC separation of products formed. (3) Split of 1:9 to MS and p38α bioaffinity assay. (4) Reaction coil for enzyme binding. (5) Addition of tracer molecule. (6) Detection of enzyme tracer complex by fluorescence and parallel HR-MSn for structural information of binders
Optimized electrochemical conversion conditions for DMPIP, BIRB796, and SB203580
| Inhibitor | EC conditions | ||
|---|---|---|---|
| pH | Potential | ||
| DMPIP | 3.5 | +1.2 V | −1.5 V |
| 10.0 | +1.2 V | ||
| BIRB796 | 3.5 | +0.8 V | |
| 10.0 | +0.8 V | ||
| SB203580 | 5.0 | +1.5 V | |
| 10.0 | +1.5 V | ||
Fig. 3Correlation of bioaffinity profiles (top) and HR-MS traces (bottom) of electrochemical conversion products related to DMPIP
Fig. 4Structure of DMPIP and characteristic parts for MS/MS identification of electrochemical conversion products
Identification of electrochemical conversion products related to DMPIP based on high resolution MSn experiments (for explanation: see text)
MS fragmentation is not to be confused with EC modifications (e.g., hydrolysis). For conclusions on nature and site of the EC modifications drawn from the MSn data, please refer to the text. Binding to p38α kinase is defined as an S/N ratio of >3 in the p38α bioaffinity assay (see also Fig. 3). The products showing bioaffinity are underlined in gray
Fig. 5MS and MS/MS spectra of the electrochemical conversion product of DMPIP, with m/z 472.1461. Annotations related to the parent structure (Fig. 4) are included in the spectra
Fig. 6Correlation of bioaffinity profiles (top) and HR-MS traces (bottom) of electrochemical conversion products related to BIRB796, conversion at pH 3.5 with 0.8 V