Literature DB >> 22220034

(E)-N'-(2-Chloro-benzyl-idene)-3,5-di-hydroxy-benzohydrazide dihydrate.

Ling Yuan, Yi Nan, Jing-Yuan Li, Xiu-Lan Huang.   

Abstract

In the Schiff base mol-ecule of the title compound, C(14)H(11)ClN(2)O(3)·2H(2)O, the benzene rings form a dihedral angle of 20.6 (1)°. The water molecules of crystallization are involved in the formation of a three-dimensional hydrogen-bonding network via O-H⋯O and N-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 22220034      PMCID: PMC3247416          DOI: 10.1107/S1600536811042681

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to Schiff base compounds, see: Brückner et al. (2000 ▶); Harrop et al.(2003 ▶); Zhang et al. (2008 ▶). For related structures, see: Diao et al. (2007 ▶); Jiang et al. (2008 ▶); Huang et al. (2008 ▶); Deng et al. (2009 ▶).

Experimental

Crystal data

C14H11ClN2O3·2H2O M = 326.73 Monoclinic, a = 8.023 (2) Å b = 11.852 (4) Å c = 16.318 (5) Å β = 100.387 (4)° V = 1526.1 (8) Å3 Z = 4 Mo Kα radiation μ = 0.28 mm−1 T = 296 K 0.44 × 0.12 × 0.07 mm

Data collection

Bruker APEXII CCD diffractometer 12729 measured reflections 3522 independent reflections 2286 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.140 S = 1.03 3522 reflections 199 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.33 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2005 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811042681/cv5172sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811042681/cv5172Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811042681/cv5172Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H11ClN2O3·2H2OF(000) = 680
Mr = 326.73Dx = 1.422 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P2ybcCell parameters from 4061 reflections
a = 8.023 (2) Åθ = 2.5–27.1°
b = 11.852 (4) ŵ = 0.28 mm1
c = 16.318 (5) ÅT = 296 K
β = 100.387 (4)°Stick, yellow
V = 1526.1 (8) Å30.44 × 0.12 × 0.07 mm
Z = 4
Bruker APEXII CCD diffractometer2286 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.040
graphiteθmax = 27.6°, θmin = 2.1°
φ and ω scansh = −10→10
12729 measured reflectionsk = −15→15
3522 independent reflectionsl = −20→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.140H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.044P)2 + 1.2P] where P = (Fo2 + 2Fc2)/3
3522 reflections(Δ/σ)max < 0.001
199 parametersΔρmax = 0.32 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.07549 (13)0.73732 (7)0.46696 (6)0.0836 (3)
O10.4482 (3)0.20583 (16)0.45642 (10)0.0555 (5)
O20.7564 (2)0.07180 (15)0.22642 (10)0.0508 (5)
H2B0.79320.04260.27160.076*
O30.3480 (3)0.33745 (18)0.10033 (10)0.0615 (6)
H3A0.38640.31770.05930.092*
N10.3161 (2)0.41028 (17)0.48357 (10)0.0374 (4)
N20.3589 (2)0.37857 (17)0.40850 (10)0.0368 (4)
H2A0.34500.42520.36740.044*
C10.1081 (3)0.6554 (2)0.55602 (17)0.0472 (6)
C20.0554 (4)0.6968 (3)0.6271 (2)0.0621 (8)
H20.00220.76660.62570.074*
C30.0818 (4)0.6351 (3)0.6986 (2)0.0678 (9)
H30.04830.66350.74620.081*
C40.1571 (4)0.5318 (3)0.70062 (18)0.0687 (9)
H40.17380.48970.74950.082*
C50.2090 (4)0.4891 (3)0.63044 (16)0.0550 (7)
H50.25960.41840.63260.066*
C60.1866 (3)0.5505 (2)0.55659 (14)0.0382 (5)
C70.2396 (3)0.5047 (2)0.48164 (14)0.0371 (5)
H70.21710.54530.43210.044*
C80.4220 (3)0.2757 (2)0.39941 (12)0.0353 (5)
C90.4635 (3)0.25014 (19)0.31552 (12)0.0326 (5)
C100.5859 (3)0.16929 (19)0.31167 (12)0.0347 (5)
H100.63570.13020.35920.042*
C110.6334 (3)0.14750 (19)0.23525 (13)0.0351 (5)
C120.5573 (3)0.2046 (2)0.16457 (12)0.0387 (5)
H120.59160.19100.11400.046*
C130.4305 (3)0.2818 (2)0.16880 (12)0.0387 (5)
C140.3828 (3)0.3059 (2)0.24457 (13)0.0393 (5)
H140.29810.35850.24770.047*
O40.2697 (4)−0.0135 (3)0.4316 (2)0.1159 (11)
H4A0.3177−0.06880.45950.174*
H4B0.32660.04730.43390.174*
O50.9176 (3)−0.00817 (18)0.37266 (13)0.0690 (6)
H5A1.0182−0.00700.40010.104*
H5B0.8554−0.04650.39930.104*
U11U22U33U12U13U23
Cl10.1051 (7)0.0521 (5)0.0969 (7)0.0157 (5)0.0274 (6)0.0134 (4)
O10.0881 (14)0.0572 (11)0.0272 (8)0.0154 (10)0.0261 (9)0.0084 (8)
O20.0624 (12)0.0562 (11)0.0360 (9)0.0213 (9)0.0146 (8)−0.0016 (8)
O30.0820 (14)0.0817 (14)0.0224 (8)0.0345 (12)0.0139 (8)0.0076 (8)
N10.0404 (11)0.0505 (12)0.0244 (8)0.0010 (9)0.0141 (8)−0.0046 (8)
N20.0438 (11)0.0479 (11)0.0217 (8)0.0006 (9)0.0140 (8)−0.0011 (8)
C10.0379 (14)0.0438 (14)0.0619 (16)−0.0085 (11)0.0146 (12)−0.0153 (12)
C20.0455 (16)0.0534 (17)0.093 (2)−0.0089 (13)0.0284 (16)−0.0352 (17)
C30.0585 (19)0.087 (2)0.067 (2)−0.0154 (17)0.0349 (16)−0.0362 (18)
C40.071 (2)0.097 (3)0.0449 (15)0.0004 (19)0.0279 (14)−0.0074 (16)
C50.0568 (17)0.0714 (19)0.0414 (14)0.0092 (14)0.0212 (12)−0.0046 (13)
C60.0311 (12)0.0477 (13)0.0384 (12)−0.0053 (10)0.0131 (9)−0.0095 (10)
C70.0366 (12)0.0455 (13)0.0311 (11)−0.0054 (11)0.0114 (9)−0.0022 (9)
C80.0394 (12)0.0451 (13)0.0240 (10)0.0002 (10)0.0129 (9)−0.0016 (9)
C90.0368 (12)0.0419 (12)0.0209 (9)−0.0035 (10)0.0103 (8)−0.0017 (8)
C100.0403 (13)0.0412 (12)0.0235 (9)0.0004 (10)0.0081 (9)0.0006 (9)
C110.0406 (13)0.0376 (12)0.0290 (10)−0.0009 (10)0.0112 (9)−0.0055 (9)
C120.0497 (14)0.0474 (13)0.0220 (9)0.0015 (11)0.0146 (9)−0.0062 (9)
C130.0464 (13)0.0481 (13)0.0222 (10)0.0042 (11)0.0076 (9)0.0001 (9)
C140.0464 (14)0.0480 (13)0.0257 (10)0.0100 (11)0.0124 (9)−0.0005 (9)
O40.099 (2)0.098 (2)0.138 (3)−0.0265 (18)−0.0111 (19)0.0009 (19)
O50.0685 (14)0.0749 (14)0.0616 (12)0.0020 (11)0.0063 (10)0.0216 (11)
Cl1—C11.728 (3)C5—C61.391 (4)
O1—C81.235 (3)C5—H50.9300
O2—C111.361 (3)C6—C71.469 (3)
O2—H2B0.8200C7—H70.9300
O3—C131.362 (3)C8—C91.497 (3)
O3—H3A0.8200C9—C101.382 (3)
N1—C71.274 (3)C9—C141.388 (3)
N1—N21.383 (2)C10—C111.392 (3)
N2—C81.338 (3)C10—H100.9300
N2—H2A0.8600C11—C121.381 (3)
C1—C61.392 (4)C12—C131.379 (3)
C1—C21.393 (4)C12—H120.9300
C2—C31.361 (5)C13—C141.388 (3)
C2—H20.9300C14—H140.9300
C3—C41.363 (5)O4—H4A0.8500
C3—H30.9300O4—H4B0.8500
C4—C51.383 (4)O5—H5A0.8500
C4—H40.9300O5—H5B0.8500
C11—O2—H2B109.5N1—C7—H7119.5
C13—O3—H3A109.5C6—C7—H7119.5
C7—N1—N2114.36 (19)O1—C8—N2122.96 (18)
C8—N2—N1120.34 (18)O1—C8—C9121.1 (2)
C8—N2—H2A119.8N2—C8—C9115.90 (19)
N1—N2—H2A119.8C10—C9—C14121.39 (18)
C6—C1—C2120.9 (3)C10—C9—C8117.35 (19)
C6—C1—Cl1120.46 (19)C14—C9—C8121.3 (2)
C2—C1—Cl1118.6 (2)C9—C10—C11118.7 (2)
C3—C2—C1120.1 (3)C9—C10—H10120.6
C3—C2—H2120.0C11—C10—H10120.6
C1—C2—H2120.0O2—C11—C12117.05 (18)
C2—C3—C4120.2 (3)O2—C11—C10122.6 (2)
C2—C3—H3119.9C12—C11—C10120.4 (2)
C4—C3—H3119.9C13—C12—C11120.16 (18)
C3—C4—C5120.4 (3)C13—C12—H12119.9
C3—C4—H4119.8C11—C12—H12119.9
C5—C4—H4119.8O3—C13—C12122.25 (18)
C4—C5—C6121.0 (3)O3—C13—C14117.4 (2)
C4—C5—H5119.5C12—C13—C14120.3 (2)
C6—C5—H5119.5C9—C14—C13118.9 (2)
C5—C6—C1117.4 (2)C9—C14—H14120.6
C5—C6—C7121.1 (2)C13—C14—H14120.6
C1—C6—C7121.5 (2)H4A—O4—H4B116.3
N1—C7—C6120.9 (2)H5A—O5—H5B109.2
C7—N1—N2—C8−172.3 (2)O1—C8—C9—C10−24.0 (3)
C6—C1—C2—C30.6 (4)N2—C8—C9—C10154.7 (2)
Cl1—C1—C2—C3−178.9 (2)O1—C8—C9—C14156.3 (2)
C1—C2—C3—C4−1.1 (5)N2—C8—C9—C14−25.0 (3)
C2—C3—C4—C50.6 (5)C14—C9—C10—C112.8 (3)
C3—C4—C5—C60.4 (5)C8—C9—C10—C11−176.9 (2)
C4—C5—C6—C1−0.9 (4)C9—C10—C11—O2178.0 (2)
C4—C5—C6—C7−179.2 (3)C9—C10—C11—C12−1.0 (3)
C2—C1—C6—C50.4 (4)O2—C11—C12—C13179.4 (2)
Cl1—C1—C6—C5179.9 (2)C10—C11—C12—C13−1.6 (4)
C2—C1—C6—C7178.7 (2)C11—C12—C13—O3−177.8 (2)
Cl1—C1—C6—C7−1.7 (3)C11—C12—C13—C142.4 (4)
N2—N1—C7—C6−179.62 (19)C10—C9—C14—C13−2.0 (4)
C5—C6—C7—N1−3.9 (4)C8—C9—C14—C13177.7 (2)
C1—C6—C7—N1177.8 (2)O3—C13—C14—C9179.6 (2)
N1—N2—C8—O1−1.5 (4)C12—C13—C14—C9−0.6 (4)
N1—N2—C8—C9179.82 (19)
D—H···AD—HH···AD···AD—H···A
O2—H2B···O50.821.872.674 (3)168.
O3—H3A···O1i0.821.852.665 (2)169.
N2—H2A···O2ii0.862.363.196 (3)164.
O4—H4B···O10.852.122.960 (4)171.
O5—H5A···O4iii0.851.992.816 (4)163.
O5—H5B···O3iv0.852.142.902 (3)150.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2B⋯O50.821.872.674 (3)168
O3—H3A⋯O1i0.821.852.665 (2)169
N2—H2A⋯O2ii0.862.363.196 (3)164
O4—H4B⋯O10.852.122.960 (4)171
O5—H5A⋯O4iii0.851.992.816 (4)163
O5—H5B⋯O3iv0.852.142.902 (3)150

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-pyrrolylthiones as monoanionic bidentate N,S-chelators: synthesis and molecular structure of 2-pyrrolylthionato complexes of nickel(II), cobalt(III), and mercury(II).

Authors:  C Brückner; S J Rettig; D Dolphin
Journal:  Inorg Chem       Date:  2000-12-25       Impact factor: 5.165

3.  Dioxygen activation by a dinuclear nickel thiolate complex: structural characterization of the ligand oxidized product.

Authors:  Todd C Harrop; Marilyn M Olmstead; Pradip K Mascharak
Journal:  Chem Commun (Camb)       Date:  2003-02-07       Impact factor: 6.222

4.  (E)-N'-(5-Chloro-2-hydroxy-benzyl-idene)-3,5-dihydroxy-benzohydrazide mono-hydrate.

Authors:  Sa Deng; Ling Han; Shan-Shan Huang; Hou-Li Zhang; Yun-Peng Diao; Ke-Xin Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-11

5.  3,5-Dihydr-oxy-N'-(2-hydroxy-benzyl-idene)benzohydrazide monohydrate.

Authors:  Qing-Hua Jiang; Ying-Hong Xu; Ling-Yan Jian; Li-Mei Zhao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2007-12-21
  5 in total

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