Literature DB >> 21582457

(E)-N'-(5-Chloro-2-hydroxy-benzyl-idene)-3,5-dihydroxy-benzohydrazide mono-hydrate.

Sa Deng, Ling Han, Shan-Shan Huang, Hou-Li Zhang, Yun-Peng Diao, Ke-Xin Liu.   

Abstract

In the title compound, C(14)H(11)ClN(2)O(4)·H(2)O, the dihedral angle between the two benzene rings is 8.5 (2)° and an intra-molecular O-H⋯N hydrogen bond is observed in the Schiff base mol-ecule. In the crystal structure, the water mol-ecule accepts an N-H⋯O hydrogen bond and makes O-H⋯O hydrogen bonds to two further Schiff base mol-ecules. Further inter-molecular O-H⋯O hydrogen bonds lead to the formation of layers parallel to the bc plane.

Entities:  

Year:  2009        PMID: 21582457      PMCID: PMC2968927          DOI: 10.1107/S1600536809007788

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the synthesis of Schiff base compounds, see: Herrick et al. (2008 ▶); Suresh et al. (2007 ▶). For the biological activity of Schiff base compounds, see: Bhandari et al. (2008 ▶); Sinha et al. (2008 ▶). For a related structure, see: Jiang et al. (2008 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C14H11ClN2O4·H2O M = 324.71 Monoclinic, a = 14.106 (3) Å b = 8.0090 (16) Å c = 13.127 (3) Å β = 108.26 (3)° V = 1408.3 (6) Å3 Z = 4 Mo Kα radiation μ = 0.30 mm−1 T = 298 K 0.20 × 0.20 × 0.18 mm

Data collection

Siemens SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Siemens, 1996 ▶) T min = 0.943, T max = 0.948 6975 measured reflections 2496 independent reflections 1437 reflections with I > 2σ(I) R int = 0.084

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.142 S = 1.04 2496 reflections 202 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.30 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809007788/hb2921sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809007788/hb2921Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H11ClN2O4·H2OF(000) = 672
Mr = 324.71Dx = 1.531 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 575 reflections
a = 14.106 (3) Åθ = 3.1–20.4°
b = 8.0090 (16) ŵ = 0.30 mm1
c = 13.127 (3) ÅT = 298 K
β = 108.26 (3)°Block, light yellow
V = 1408.3 (6) Å30.20 × 0.20 × 0.18 mm
Z = 4
Siemens SMART CCD diffractometer2496 independent reflections
Radiation source: fine-focus sealed tube1437 reflections with I > 2σ(I)
graphiteRint = 0.084
ω scansθmax = 25.0°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Siemens, 1996)h = −16→13
Tmin = 0.943, Tmax = 0.948k = −9→7
6975 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.142H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0453P)2 + 1.0153P] where P = (Fo2 + 2Fc2)/3
2496 reflections(Δ/σ)max < 0.001
202 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.45135 (9)1.22680 (17)0.91318 (10)0.0558 (4)
N10.8522 (2)0.8948 (4)0.8966 (3)0.0295 (8)
N20.9299 (2)0.8091 (4)0.9689 (2)0.0291 (8)
H20.92460.77581.02910.035*
O10.7409 (2)1.0093 (4)0.7040 (2)0.0439 (8)
H10.78530.95230.74420.066*
O21.02312 (19)0.8242 (4)0.8572 (2)0.0380 (8)
O31.3085 (2)0.4281 (4)1.0233 (2)0.0491 (9)
H31.29830.44560.95920.074*
O41.1915 (2)0.5757 (4)1.3090 (2)0.0400 (8)
H41.14810.63081.32290.060*
O50.8783 (2)0.7575 (4)0.6646 (2)0.0434 (8)
H5A0.91960.77610.72630.065*
H5B0.84350.67650.67500.065*
C10.6935 (3)1.0274 (5)0.8653 (3)0.0274 (9)
C20.6769 (3)1.0606 (5)0.7568 (3)0.0309 (10)
C30.5923 (3)1.1451 (6)0.6983 (3)0.0426 (12)
H3A0.58191.16660.62600.051*
C40.5231 (3)1.1979 (6)0.7450 (4)0.0437 (12)
H4A0.46621.25500.70500.052*
C50.5392 (3)1.1652 (6)0.8520 (3)0.0364 (11)
C60.6229 (3)1.0829 (5)0.9126 (3)0.0354 (11)
H60.63301.06380.98510.042*
C70.7800 (3)0.9389 (5)0.9314 (3)0.0298 (10)
H70.78380.91271.00160.036*
C81.0139 (3)0.7786 (5)0.9438 (3)0.0254 (9)
C91.0938 (3)0.6850 (5)1.0242 (3)0.0252 (9)
C101.1629 (3)0.6018 (5)0.9869 (3)0.0291 (10)
H101.15740.60650.91450.035*
C111.2398 (3)0.5122 (5)1.0569 (3)0.0304 (10)
C121.2492 (3)0.5052 (5)1.1645 (3)0.0334 (10)
H121.30110.44551.21170.040*
C131.1801 (3)0.5882 (5)1.2015 (3)0.0285 (10)
C141.1025 (3)0.6788 (5)1.1327 (3)0.0297 (10)
H141.05700.73451.15870.036*
U11U22U33U12U13U23
Cl10.0391 (7)0.0748 (10)0.0587 (8)0.0186 (7)0.0226 (6)−0.0009 (7)
N10.0256 (18)0.032 (2)0.0297 (19)0.0018 (16)0.0075 (15)0.0043 (16)
N20.0262 (18)0.039 (2)0.0238 (17)0.0072 (16)0.0095 (15)0.0089 (16)
O10.0415 (18)0.061 (2)0.0333 (17)0.0121 (17)0.0175 (15)0.0069 (16)
O20.0337 (17)0.057 (2)0.0252 (15)0.0057 (15)0.0122 (13)0.0097 (15)
O30.0467 (19)0.069 (2)0.0379 (18)0.0283 (18)0.0223 (16)0.0028 (17)
O40.0422 (19)0.053 (2)0.0282 (16)0.0143 (16)0.0160 (14)0.0059 (14)
O50.0438 (18)0.058 (2)0.0298 (16)−0.0058 (17)0.0131 (14)−0.0021 (15)
C10.022 (2)0.031 (3)0.026 (2)0.0015 (19)0.0036 (17)0.0020 (19)
C20.029 (2)0.037 (3)0.029 (2)0.000 (2)0.0129 (19)0.000 (2)
C30.041 (3)0.057 (3)0.027 (2)0.010 (2)0.006 (2)0.009 (2)
C40.034 (3)0.050 (3)0.042 (3)0.012 (2)0.004 (2)0.009 (2)
C50.026 (2)0.044 (3)0.041 (3)0.008 (2)0.014 (2)−0.002 (2)
C60.035 (2)0.043 (3)0.031 (2)0.000 (2)0.015 (2)−0.001 (2)
C70.028 (2)0.036 (3)0.028 (2)−0.003 (2)0.0116 (18)0.0002 (19)
C80.025 (2)0.028 (2)0.025 (2)−0.0002 (19)0.0087 (17)0.0024 (18)
C90.024 (2)0.029 (2)0.025 (2)−0.0001 (18)0.0104 (17)−0.0021 (18)
C100.031 (2)0.034 (3)0.025 (2)0.002 (2)0.0119 (18)−0.0024 (19)
C110.029 (2)0.035 (3)0.028 (2)0.005 (2)0.0111 (19)−0.002 (2)
C120.032 (2)0.039 (3)0.029 (2)0.008 (2)0.0097 (19)0.003 (2)
C130.028 (2)0.032 (3)0.026 (2)−0.001 (2)0.0088 (18)0.0033 (19)
C140.027 (2)0.037 (3)0.028 (2)0.003 (2)0.0145 (19)−0.001 (2)
Cl1—C51.746 (4)C3—C41.372 (6)
N1—C71.290 (4)C3—H3A0.9300
N1—N21.386 (4)C4—C51.376 (6)
N2—C81.348 (4)C4—H4A0.9300
N2—H20.8600C5—C61.368 (6)
O1—C21.364 (4)C6—H60.9300
O1—H10.8200C7—H70.9300
O2—C81.238 (4)C8—C91.484 (5)
O3—C111.362 (4)C9—C101.391 (5)
O3—H30.8200C9—C141.392 (5)
O4—C131.373 (4)C10—C111.382 (5)
O4—H40.8200C10—H100.9300
O5—H5A0.8500C11—C121.378 (5)
O5—H5B0.8500C12—C131.387 (5)
C1—C21.395 (5)C12—H120.9300
C1—C61.401 (5)C13—C141.386 (5)
C1—C71.442 (5)C14—H140.9300
C2—C31.377 (6)
C7—N1—N2115.8 (3)C1—C6—H6120.0
C8—N2—N1119.3 (3)N1—C7—C1122.3 (4)
C8—N2—H2120.4N1—C7—H7118.8
N1—N2—H2120.4C1—C7—H7118.8
C2—O1—H1109.5O2—C8—N2121.6 (3)
C11—O3—H3109.5O2—C8—C9121.8 (3)
C13—O4—H4109.5N2—C8—C9116.6 (3)
H5A—O5—H5B103.8C10—C9—C14119.7 (4)
C2—C1—C6118.5 (4)C10—C9—C8116.8 (3)
C2—C1—C7123.3 (4)C14—C9—C8123.4 (3)
C6—C1—C7118.3 (4)C11—C10—C9120.4 (4)
O1—C2—C3117.5 (4)C11—C10—H10119.8
O1—C2—C1122.4 (4)C9—C10—H10119.8
C3—C2—C1120.1 (4)O3—C11—C12117.6 (4)
C4—C3—C2121.1 (4)O3—C11—C10122.1 (3)
C4—C3—H3A119.5C12—C11—C10120.3 (4)
C2—C3—H3A119.5C11—C12—C13119.2 (4)
C3—C4—C5119.0 (4)C11—C12—H12120.4
C3—C4—H4A120.5C13—C12—H12120.4
C5—C4—H4A120.5O4—C13—C14121.5 (3)
C6—C5—C4121.4 (4)O4—C13—C12117.2 (4)
C6—C5—Cl1118.5 (3)C14—C13—C12121.4 (4)
C4—C5—Cl1120.1 (3)C13—C14—C9119.0 (4)
C5—C6—C1119.9 (4)C13—C14—H14120.5
C5—C6—H6120.0C9—C14—H14120.5
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.821.982.685 (4)144
O1—H1···O50.822.472.952 (4)119
O3—H3···O1i0.822.102.916 (4)173
O4—H4···O2ii0.821.992.762 (4)158
N2—H2···O5ii0.862.092.931 (4)164
O5—H5A···O20.851.912.760 (4)174
O5—H5B···O4iii0.852.112.902 (4)156
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.821.982.685 (4)144
O1—H1⋯O50.822.472.952 (4)119
O3—H3⋯O1i0.822.102.916 (4)173
O4—H4⋯O2ii0.821.992.762 (4)158
N2—H2⋯O5ii0.862.092.931 (4)164
O5—H5A⋯O20.851.912.760 (4)174
O5—H5B⋯O4iii0.852.112.902 (4)156

Symmetry codes: (i) ; (ii) ; (iii) .

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