Literature DB >> 22219913

2-Amino-4-(3,4-dimeth-oxy-phen-yl)-5,6-dihydro-benzo[h]quinoline-3-carbo-nitrile-3-amino-1-(3,4-dimeth-oxy-phen-yl)-9,10-dihydro-phenanthrene-2,4-dicarbonitrile (1/19).

Abdullah M Asiri, Abdulrahman O Al-Youbi, Hassan M Faidallah, Seik Weng Ng.   

Abstract

The asymmetric unit of the 1:19 title co-crystal of 2-amino-4-(3,4-dimeth-oxy-phen-yl)-5,6-dihydro-benzo[h]quinoline-3-carbo-nitrile and 3-amino-1-(3,4-din class="Chemical">meth-oxy-phen-yl)-9,10-dihydro-phenanthrene-2,4-dicarbonitrile, 0.05C(22)H(19)N(3)O(2)·0.95C(24)H(19)N(3)O(2), has the atoms of the fused-ring system and those of the amino, cyano and dimeth-oxy-phenyl substitutents overlapped. The fused-ring system is buckled owing to the ethyl-ene linkage in the central ring with the two flanking aromatic rings being twisted by 31.9 (1)°. The ring of the dimeth-oxy-phenyl substituent is twisted by 72.4 (1)° relative to the amino- and cyano-bearing aromatic ring. In the crystal, mol-ecules are linked by duplex amine N-H⋯O(meth-oxy) hydrogen bonds in a cyclic association [graph-set R(2) (2)(7)], generating a helical chain structure extending along [201].

Entities:  

Year:  2011        PMID: 22219913      PMCID: PMC3247608          DOI: 10.1107/S1600536811040517

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a similar co-crystal, see: Asiri et al. (2011 ▶). For graph-set analysis, see: Etter et al. (1990 ▶).

Experimental

Crystal data

0.05C22H19N3O2·0.95C24H19N3O2 M = 380.22 Monoclinic, a = 8.9347 (3) Å b = 14.4915 (5) Å c = 14.7818 (6) Å β = 103.446 (4)° V = 1861.45 (12) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.30 × 0.25 × 0.20 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010 ▶) T min = 0.974, T max = 0.983 9240 measured reflections 4160 independent reflections 3146 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.124 S = 1.04 4160 reflections 270 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.30 e Å−3 Δρmin = −0.24 e Å−3 Data collection: CrysAlis PRO (Agilent, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811040517/zs2146sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811040517/zs2146Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811040517/zs2146Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
0.05C22H19N3O2·0.95C24H19N3O2F(000) = 797.6
Mr = 380.22Dx = 1.357 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3220 reflections
a = 8.9347 (3) Åθ = 2.3–29.2°
b = 14.4915 (5) ŵ = 0.09 mm1
c = 14.7818 (6) ÅT = 100 K
β = 103.446 (4)°Block, orange
V = 1861.45 (12) Å30.30 × 0.25 × 0.20 mm
Z = 4
Agilent SuperNova Dual diffractometer with an Atlas detector4160 independent reflections
Radiation source: SuperNova (Mo) X-ray Source3146 reflections with I > 2σ(I)
MirrorRint = 0.031
Detector resolution: 10.4041 pixels mm-1θmax = 27.5°, θmin = 2.3°
ω scansh = −11→8
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010)k = −18→17
Tmin = 0.974, Tmax = 0.983l = −19→17
9240 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.124H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0502P)2 + 0.6446P] where P = (Fo2 + 2Fc2)/3
4160 reflections(Δ/σ)max = 0.001
270 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.24 e Å3
xyzUiso*/UeqOcc. (<1)
O10.30588 (13)0.63995 (9)0.10804 (8)0.0271 (3)
O20.07648 (12)0.69798 (8)0.17421 (8)0.0220 (3)
N10.94620 (18)0.95400 (11)0.33260 (11)0.0197 (3)0.05
C1'0.94620 (18)0.95400 (11)0.33260 (11)0.0197 (3)0.95
N21.21403 (18)1.02734 (11)0.39566 (11)0.0279 (4)0.95
N31.00292 (18)0.87635 (11)0.48043 (11)0.0271 (4)
H11.104 (3)0.9012 (16)0.4948 (16)0.053 (7)*
H20.973 (2)0.8423 (15)0.5258 (15)0.035 (6)*
N40.68515 (17)0.74165 (11)0.49326 (11)0.0294 (4)
C10.84721 (19)0.97189 (11)0.24628 (11)0.0209 (4)
C20.8945 (2)1.02681 (12)0.17292 (12)0.0253 (4)
C31.0457 (2)1.02878 (13)0.16227 (13)0.0315 (4)
H31.12320.99470.20380.038*
C41.0837 (3)1.07998 (14)0.09164 (14)0.0374 (5)
H41.18671.08080.08470.045*
C50.9711 (3)1.12980 (14)0.03145 (14)0.0425 (5)
H50.99761.1660−0.01610.051*
C60.8200 (3)1.12739 (13)0.03999 (13)0.0382 (5)
H60.74351.1618−0.00190.046*
C70.7794 (2)1.07502 (12)0.10951 (12)0.0295 (4)
C80.6159 (2)1.06430 (13)0.11720 (13)0.0326 (4)
H8A0.54491.08390.05850.039*
H8B0.59701.10350.16820.039*
C90.5876 (2)0.96303 (13)0.13680 (12)0.0292 (4)
H9A0.48010.95470.14240.035*
H9B0.60360.92420.08480.035*
C100.69749 (19)0.93394 (12)0.22619 (12)0.0231 (4)
C110.65552 (18)0.87253 (11)0.28827 (11)0.0213 (4)
C120.75689 (18)0.85343 (11)0.37374 (11)0.0193 (3)
C130.90408 (18)0.89474 (11)0.39830 (11)0.0196 (3)
C141.0941 (2)0.99715 (12)0.36327 (12)0.0225 (4)0.95
C150.71436 (18)0.79079 (12)0.43878 (12)0.0224 (4)
C160.50312 (18)0.82492 (12)0.26343 (11)0.0215 (4)
C170.47860 (19)0.75520 (12)0.19617 (12)0.0224 (4)
H170.55990.73750.16830.027*
C180.33741 (18)0.71173 (11)0.16982 (11)0.0203 (4)
C190.21512 (18)0.74044 (11)0.20790 (11)0.0193 (3)
C200.2414 (2)0.80721 (12)0.27631 (12)0.0249 (4)
H200.16050.82510.30440.030*
C210.3855 (2)0.84870 (13)0.30454 (12)0.0262 (4)
H210.40260.89370.35260.031*
C220.4368 (2)0.59651 (14)0.08517 (15)0.0368 (5)
H22A0.40200.54620.04090.055*
H22B0.50430.57160.14180.055*
H22C0.49340.64200.05710.055*
C23−0.05031 (19)0.73108 (12)0.20937 (13)0.0260 (4)
H23A−0.14300.69570.18140.039*
H23B−0.06780.79650.19370.039*
H23C−0.02680.72360.27710.039*
U11U22U33U12U13U23
O10.0180 (6)0.0316 (7)0.0312 (7)0.0003 (5)0.0050 (5)−0.0126 (6)
O20.0152 (6)0.0253 (6)0.0258 (6)−0.0021 (5)0.0051 (5)−0.0061 (5)
N10.0175 (8)0.0197 (8)0.0218 (8)−0.0008 (7)0.0042 (7)−0.0027 (7)
C1'0.0175 (8)0.0197 (8)0.0218 (8)−0.0008 (7)0.0042 (7)−0.0027 (7)
N20.0214 (8)0.0270 (8)0.0354 (9)−0.0022 (7)0.0065 (7)0.0011 (7)
N30.0209 (8)0.0325 (9)0.0240 (8)−0.0045 (7)−0.0028 (6)0.0063 (7)
N40.0257 (8)0.0309 (8)0.0315 (8)−0.0031 (7)0.0065 (7)0.0030 (7)
C10.0233 (8)0.0196 (8)0.0192 (8)0.0004 (7)0.0036 (7)−0.0026 (7)
C20.0347 (10)0.0209 (8)0.0199 (8)−0.0056 (8)0.0056 (8)−0.0035 (7)
C30.0391 (11)0.0267 (10)0.0308 (10)−0.0063 (8)0.0126 (9)−0.0034 (8)
C40.0523 (13)0.0317 (10)0.0342 (11)−0.0115 (10)0.0219 (10)−0.0042 (9)
C50.0717 (16)0.0323 (11)0.0272 (10)−0.0162 (11)0.0190 (11)−0.0001 (9)
C60.0593 (14)0.0284 (10)0.0228 (9)−0.0058 (10)0.0013 (9)0.0015 (8)
C70.0434 (11)0.0237 (9)0.0191 (9)−0.0057 (8)0.0026 (8)−0.0020 (7)
C80.0400 (11)0.0293 (10)0.0217 (9)0.0011 (9)−0.0065 (8)0.0023 (8)
C90.0298 (10)0.0303 (10)0.0225 (9)−0.0031 (8)−0.0041 (8)0.0001 (8)
C100.0217 (8)0.0244 (9)0.0205 (8)−0.0004 (7)−0.0006 (7)−0.0016 (7)
C110.0175 (8)0.0229 (8)0.0231 (8)0.0010 (7)0.0037 (7)−0.0042 (7)
C120.0174 (8)0.0204 (8)0.0205 (8)−0.0001 (7)0.0051 (7)−0.0015 (7)
C130.0180 (8)0.0185 (8)0.0216 (8)0.0019 (7)0.0031 (7)−0.0025 (7)
C140.0246 (9)0.0218 (9)0.0218 (9)0.0016 (8)0.0068 (8)0.0016 (7)
C150.0161 (8)0.0247 (9)0.0243 (9)−0.0003 (7)0.0007 (7)−0.0036 (7)
C160.0159 (8)0.0251 (8)0.0210 (8)0.0015 (7)−0.0006 (7)0.0023 (7)
C170.0164 (8)0.0281 (9)0.0225 (8)0.0019 (7)0.0041 (7)−0.0008 (7)
C180.0198 (8)0.0219 (8)0.0184 (8)0.0010 (7)0.0026 (7)−0.0027 (7)
C190.0151 (8)0.0210 (8)0.0203 (8)−0.0001 (6)0.0013 (7)0.0029 (7)
C200.0195 (8)0.0294 (9)0.0266 (9)−0.0019 (7)0.0072 (7)−0.0068 (7)
C210.0230 (9)0.0300 (10)0.0247 (9)−0.0023 (8)0.0035 (7)−0.0072 (8)
C220.0242 (10)0.0402 (12)0.0475 (12)0.0015 (9)0.0115 (9)−0.0201 (10)
C230.0168 (8)0.0287 (9)0.0334 (10)−0.0011 (7)0.0079 (7)−0.0061 (8)
O1—C181.370 (2)C8—H8A0.9900
O1—C221.436 (2)C8—H8B0.9900
O2—C191.3690 (19)C9—C101.512 (2)
O2—C231.434 (2)C9—H9A0.9900
N1—C11.397 (2)C9—H9B0.9900
N1—C131.411 (2)C10—C111.391 (2)
N2—C141.153 (2)C11—C121.400 (2)
N3—C131.351 (2)C11—C161.494 (2)
N3—H10.95 (2)C12—C131.413 (2)
N3—H20.92 (2)C12—C151.436 (2)
N4—C151.150 (2)C16—C211.374 (2)
C1—C101.413 (2)C16—C171.399 (2)
C1—C21.484 (2)C17—C181.383 (2)
C2—C31.396 (3)C17—H170.9500
C2—C71.405 (3)C18—C191.403 (2)
C3—C41.386 (3)C19—C201.380 (2)
C3—H30.9500C20—C211.394 (2)
C4—C51.381 (3)C20—H200.9500
C4—H40.9500C21—H210.9500
C5—C61.386 (3)C22—H22A0.9800
C5—H50.9500C22—H22B0.9800
C6—C71.392 (3)C22—H22C0.9800
C6—H60.9500C23—H23A0.9800
C7—C81.499 (3)C23—H23B0.9800
C8—C91.528 (3)C23—H23C0.9800
C18—O1—C22115.94 (13)C1—C10—C9117.78 (15)
C19—O2—C23116.23 (13)C10—C11—C12120.31 (15)
C1—N1—C13121.85 (15)C10—C11—C16120.23 (15)
C13—N3—H1121.0 (15)C12—C11—C16119.45 (15)
C13—N3—H2121.2 (13)C11—C12—C13121.05 (15)
H1—N3—H2117.7 (19)C11—C12—C15120.84 (14)
N1—C1—C10119.15 (15)C13—C12—C15118.10 (14)
N1—C1—C2122.66 (15)N3—C13—N1121.00 (15)
C10—C1—C2118.16 (15)N3—C13—C12121.45 (16)
C3—C2—C7119.44 (17)N1—C13—C12117.52 (14)
C3—C2—C1122.73 (17)N4—C15—C12177.44 (18)
C7—C2—C1117.76 (16)C21—C16—C17119.08 (15)
C4—C3—C2120.60 (19)C21—C16—C11121.48 (15)
C4—C3—H3119.7C17—C16—C11119.44 (15)
C2—C3—H3119.7C18—C17—C16120.75 (15)
C5—C4—C3119.7 (2)C18—C17—H17119.6
C5—C4—H4120.1C16—C17—H17119.6
C3—C4—H4120.1O1—C18—C17124.52 (15)
C4—C5—C6120.47 (19)O1—C18—C19115.72 (14)
C4—C5—H5119.8C17—C18—C19119.76 (15)
C6—C5—H5119.8O2—C19—C20124.56 (15)
C5—C6—C7120.5 (2)O2—C19—C18116.35 (14)
C5—C6—H6119.7C20—C19—C18119.08 (15)
C7—C6—H6119.7C19—C20—C21120.66 (16)
C6—C7—C2119.19 (19)C19—C20—H20119.7
C6—C7—C8122.56 (18)C21—C20—H20119.7
C2—C7—C8118.19 (16)C16—C21—C20120.48 (16)
C7—C8—C9108.73 (16)C16—C21—H21119.8
C7—C8—H8A109.9C20—C21—H21119.8
C9—C8—H8A109.9O1—C22—H22A109.5
C7—C8—H8B109.9O1—C22—H22B109.5
C9—C8—H8B109.9H22A—C22—H22B109.5
H8A—C8—H8B108.3O1—C22—H22C109.5
C10—C9—C8109.33 (14)H22A—C22—H22C109.5
C10—C9—H9A109.8H22B—C22—H22C109.5
C8—C9—H9A109.8O2—C23—H23A109.5
C10—C9—H9B109.8O2—C23—H23B109.5
C8—C9—H9B109.8H23A—C23—H23B109.5
H9A—C9—H9B108.3O2—C23—H23C109.5
C11—C10—C1119.86 (15)H23A—C23—H23C109.5
C11—C10—C9122.36 (15)H23B—C23—H23C109.5
D—H···AD—HH···AD···AD—H···A
N3—H1···O1i0.95 (2)2.24 (2)2.927 (2)129 (2)
N3—H2···O2i0.92 (2)2.25 (2)2.987 (2)136 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H1⋯O1i0.95 (2)2.24 (2)2.927 (2)129 (2)
N3—H2⋯O2i0.92 (2)2.25 (2)2.987 (2)136 (2)

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

3.  2-Amino-4-phenyl-5,6-dihydro-benzo[h]quinoline-3-carbonitrile-3-amino-1-phenyl-9,10-dihydro-phenanthrene-2,4-dicarbonitrile (5/3).

Authors:  Abdullah M Asiri; Abdulrahman O Al-Youbi; Hassan M Faidallah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-08
  3 in total
  3 in total

1.  2-Amino-4-(4-chloro-phen-yl)-5,6-dihydro-benzo[h]quinoline-3-carbonitrile-3-amino-1-(4-chloro-phen-yl)-9,10-dihydro-phenanthrene-2,4-dicarbonitrile (1/4).

Authors:  Abdullah M Asiri; Abdulrahman O Al-Youbi; Hassan M Faidallah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-08

2.  A second monoclinic polymorph for 3-amino-1-(4-meth-oxy-phen-yl)-9,10-dihydro-phenanthrene-2,4-dicarbonitrile.

Authors:  Abdullah M Asiri; Hassan M Faidallah; Khalid A Alamry; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-24

3.  3-Amino-1-(3,4-dimeth-oxy-phen-yl)-9,10-dihydro-phenanthrene-2,4-dicarbonitrile.

Authors:  Abdullah M Asiri; Hassan M Faidallah; Khalid A Alamry; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-21
  3 in total

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