Literature DB >> 22219900

(Phen-yl)(3-phenyl-sulfonyl-1,2-dihydro-pyrrolo-[1,2-a]quinoxalin-1-yl)methanone.

Yaşar Dürüst, Akın Sağırlı, Frank R Fronczek.   

Abstract

In the title mol-ecule, C(24)H(18)N(2)O(3)S, the 13-atom ring system comprising the quinoxaline and fused five-membered ring exhibits an r.m.s. deviation from coplanarity of 0.039 Å, with a maximum deviation of 0.0710 (10) Å for the PhCO-bearing C atom of the five-membered ring. The 10-membered C(8)N(2) quinoxaline ring system has an r.m.s. deviation from coplanarity of 0.022 Å, with a maximum deviation of 0.0403 (9) Å for the C atom involved in the C=C bond in the five-membered ring. The three atoms of the five-membered ring fused to the quinoxaline ring system show deviations of up to 0.118 (2) Å for the PhCO-bearing C atom. C-N bond distances in the quinoxaline ring system of the title mol-ecule deviate from those in unsubstituted quinoxaline. In particular, the two C-N distances to the N atom involved in the five-membered ring are essentially equal, with values of 1.3786 (17) and 1.3773 (16) Å, unlike the difference of nearly 0.06 Å in quinoxaline.

Entities:  

Year:  2011        PMID: 22219900      PMCID: PMC3247595          DOI: 10.1107/S1600536811040335

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the transformation of benzimidazoles into pyrrolo­quinoxalines, see: Ager et al. (1988 ▶); Methcohn (1975 ▶). For the synthesis of condensed pyrazines, see: Cheeseman & Cookson (1979 ▶). For the biological activity of quinoxalines, see: Porter (1984 ▶); He et al. (2003 ▶); Kim et al. (2004 ▶). For cyclization reactions of quinoxaline derivatives, see: Taylor & Hand (1962 ▶, 1963 ▶); Yadav et al. (2008 ▶). For the structure of an analogous compound with COOMe at C9 and C10, see: Hirano et al. (2002 ▶). For polymorphs of quinoxaline, see: Ranganathan et al. (2010 ▶); Anthony et al. (1998 ▶). For a description of the Cambridge Structural Database, see: Allen (2002 ▶).

Experimental

Crystal data

C24H18N2O3S M = 414.46 Monoclinic, a = 19.0915 (9) Å b = 9.9636 (5) Å c = 10.4203 (5) Å β = 104.6190 (13)° V = 1917.98 (16) Å3 Z = 4 Cu Kα radiation μ = 1.75 mm−1 T = 90 K 0.30 × 0.27 × 0.13 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.622, T max = 0.804 31213 measured reflections 3621 independent reflections 3543 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.076 S = 1.04 3621 reflections 272 parameters H-atom parameters constrained Δρmax = 0.41 e Å−3 Δρmin = −0.39 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811040335/nk2116sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811040335/nk2116Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811040335/nk2116Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C24H18N2O3SF(000) = 864
Mr = 414.46Dx = 1.435 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ybcCell parameters from 9862 reflections
a = 19.0915 (9) Åθ = 4.4–70.1°
b = 9.9636 (5) ŵ = 1.75 mm1
c = 10.4203 (5) ÅT = 90 K
β = 104.6190 (13)°Rectangular prism, orange
V = 1917.98 (16) Å30.30 × 0.27 × 0.13 mm
Z = 4
Bruker APEXII CCD diffractometer3621 independent reflections
Radiation source: fine-focus sealed tube3543 reflections with I > 2σ(I)
graphiteRint = 0.032
φ and ω scansθmax = 70.2°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004)h = −23→23
Tmin = 0.622, Tmax = 0.804k = −10→12
31213 measured reflectionsl = −12→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.029H-atom parameters constrained
wR(F2) = 0.076w = 1/[σ2(Fo2) + (0.0349P)2 + 1.1954P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
3621 reflectionsΔρmax = 0.41 e Å3
272 parametersΔρmin = −0.39 e Å3
0 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.00108 (12)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.347686 (15)0.61731 (3)0.66691 (3)0.01450 (10)
O10.36497 (5)0.53406 (10)0.56612 (9)0.0205 (2)
O20.31216 (5)0.74476 (9)0.63034 (9)0.0200 (2)
O30.11000 (5)0.43117 (9)0.71433 (9)0.0190 (2)
N10.29905 (6)0.15898 (11)0.69500 (10)0.0166 (2)
N20.24574 (6)0.35506 (11)0.83452 (10)0.0146 (2)
C10.25306 (7)0.12578 (13)0.77577 (12)0.0155 (3)
C20.23431 (7)−0.00846 (13)0.78555 (13)0.0182 (3)
H20.2537−0.07550.73950.022*
C30.18766 (7)−0.04454 (13)0.86193 (13)0.0198 (3)
H30.1741−0.13580.86650.024*
C40.16049 (7)0.05308 (13)0.93218 (13)0.0181 (3)
H40.12900.02750.98540.022*
C50.17878 (7)0.18683 (13)0.92537 (12)0.0162 (3)
H50.16020.25270.97390.019*
C60.22492 (6)0.22410 (13)0.84637 (12)0.0142 (3)
C70.31442 (7)0.28371 (13)0.68290 (12)0.0159 (3)
H70.34500.30570.62680.019*
C80.28749 (6)0.39240 (13)0.75032 (12)0.0142 (3)
C90.29573 (6)0.52749 (13)0.74933 (12)0.0150 (3)
C100.25941 (7)0.59237 (13)0.84700 (13)0.0170 (3)
H10A0.22650.66550.80480.020*
H10B0.29550.62850.92470.020*
C110.21643 (7)0.47295 (12)0.88718 (12)0.0145 (3)
H110.22490.46710.98570.017*
C120.13534 (7)0.48735 (12)0.81931 (12)0.0139 (3)
C130.09098 (7)0.57500 (12)0.88358 (12)0.0144 (3)
C140.12184 (7)0.65545 (13)0.99308 (12)0.0163 (3)
H140.17270.65491.02960.020*
C150.07783 (7)0.73617 (14)1.04836 (13)0.0210 (3)
H150.09870.79121.12260.025*
C160.00346 (8)0.73669 (14)0.99538 (15)0.0231 (3)
H16−0.02640.79241.03330.028*
C17−0.02763 (7)0.65613 (15)0.88708 (14)0.0223 (3)
H17−0.07860.65630.85150.027*
C180.01584 (7)0.57577 (14)0.83122 (13)0.0181 (3)
H18−0.00540.52090.75700.022*
C190.42916 (7)0.64997 (14)0.78853 (12)0.0168 (3)
C200.48648 (7)0.56023 (15)0.80223 (14)0.0223 (3)
H200.48250.48440.74560.027*
C210.54965 (8)0.58369 (18)0.90036 (15)0.0304 (4)
H210.58960.52420.91090.037*
C220.55422 (8)0.69423 (19)0.98282 (14)0.0326 (4)
H220.59750.70991.04970.039*
C230.49673 (8)0.78208 (17)0.96936 (14)0.0292 (3)
H230.50060.85701.02720.035*
C240.43328 (7)0.76078 (15)0.87121 (13)0.0218 (3)
H240.39360.82070.86080.026*
U11U22U33U12U13U23
S10.01365 (16)0.01546 (17)0.01436 (16)−0.00031 (11)0.00346 (11)0.00024 (11)
O10.0224 (5)0.0226 (5)0.0183 (5)−0.0015 (4)0.0087 (4)−0.0023 (4)
O20.0200 (5)0.0191 (5)0.0203 (5)0.0021 (4)0.0039 (4)0.0038 (4)
O30.0197 (5)0.0201 (5)0.0166 (4)0.0001 (4)0.0035 (4)−0.0032 (4)
N10.0158 (5)0.0174 (6)0.0162 (5)0.0023 (4)0.0034 (4)−0.0019 (4)
N20.0142 (5)0.0138 (5)0.0169 (5)0.0011 (4)0.0060 (4)−0.0022 (4)
C10.0137 (6)0.0174 (7)0.0142 (6)0.0026 (5)0.0014 (5)−0.0007 (5)
C20.0204 (6)0.0151 (6)0.0179 (6)0.0039 (5)0.0025 (5)−0.0022 (5)
C30.0235 (7)0.0136 (6)0.0210 (7)0.0000 (5)0.0034 (5)0.0012 (5)
C40.0172 (6)0.0191 (7)0.0175 (6)−0.0001 (5)0.0033 (5)0.0024 (5)
C50.0151 (6)0.0167 (6)0.0166 (6)0.0022 (5)0.0037 (5)−0.0008 (5)
C60.0125 (6)0.0143 (6)0.0141 (6)0.0012 (5)−0.0002 (5)−0.0005 (5)
C70.0139 (6)0.0185 (7)0.0156 (6)0.0018 (5)0.0043 (5)−0.0024 (5)
C80.0103 (5)0.0180 (6)0.0134 (6)0.0004 (5)0.0015 (4)−0.0010 (5)
C90.0124 (6)0.0166 (6)0.0158 (6)−0.0003 (5)0.0033 (5)−0.0016 (5)
C100.0164 (6)0.0144 (6)0.0218 (6)−0.0009 (5)0.0077 (5)−0.0034 (5)
C110.0158 (6)0.0125 (6)0.0159 (6)0.0016 (5)0.0051 (5)−0.0024 (5)
C120.0165 (6)0.0113 (6)0.0146 (6)−0.0010 (5)0.0052 (5)0.0024 (5)
C130.0162 (6)0.0126 (6)0.0155 (6)0.0013 (5)0.0060 (5)0.0033 (5)
C140.0155 (6)0.0153 (6)0.0185 (6)0.0003 (5)0.0047 (5)0.0008 (5)
C150.0233 (7)0.0187 (7)0.0212 (6)0.0012 (5)0.0062 (5)−0.0047 (5)
C160.0223 (7)0.0220 (7)0.0274 (7)0.0077 (5)0.0110 (6)−0.0004 (6)
C170.0148 (6)0.0264 (7)0.0254 (7)0.0045 (5)0.0044 (5)0.0023 (6)
C180.0176 (6)0.0188 (7)0.0170 (6)0.0004 (5)0.0028 (5)0.0012 (5)
C190.0138 (6)0.0215 (7)0.0158 (6)−0.0034 (5)0.0049 (5)0.0039 (5)
C200.0181 (6)0.0270 (7)0.0240 (7)0.0009 (5)0.0094 (5)0.0079 (6)
C210.0140 (6)0.0467 (10)0.0311 (8)0.0020 (6)0.0065 (6)0.0193 (7)
C220.0188 (7)0.0560 (11)0.0203 (7)−0.0147 (7)−0.0002 (5)0.0121 (7)
C230.0287 (8)0.0396 (9)0.0196 (7)−0.0167 (7)0.0063 (6)−0.0021 (6)
C240.0205 (7)0.0253 (7)0.0206 (6)−0.0059 (5)0.0070 (5)−0.0001 (5)
S1—O11.4404 (9)C10—H10B0.9900
S1—O21.4448 (10)C11—C121.5377 (17)
S1—C91.7183 (13)C11—H111.0000
S1—C191.7710 (13)C12—C131.4882 (17)
O3—C121.2152 (16)C13—C141.3972 (18)
N1—C71.2904 (18)C13—C181.4003 (18)
N1—C11.4007 (17)C14—C151.3889 (18)
N2—C81.3773 (16)C14—H140.9500
N2—C61.3786 (17)C15—C161.387 (2)
N2—C111.4660 (15)C15—H150.9500
C1—C21.3950 (19)C16—C171.390 (2)
C1—C61.4103 (17)C16—H160.9500
C2—C31.3833 (19)C17—C181.3829 (19)
C2—H20.9500C17—H170.9500
C3—C41.3937 (19)C18—H180.9500
C3—H30.9500C19—C201.3924 (19)
C4—C51.3840 (19)C19—C241.390 (2)
C4—H40.9500C20—C211.390 (2)
C5—C61.3991 (18)C20—H200.9500
C5—H50.9500C21—C221.386 (3)
C7—C81.4536 (17)C21—H210.9500
C7—H70.9500C22—C231.383 (2)
C8—C91.3555 (18)C22—H220.9500
C9—C101.5135 (17)C23—C241.390 (2)
C10—C111.5613 (17)C23—H230.9500
C10—H10A0.9900C24—H240.9500
O1—S1—O2119.51 (6)N2—C11—C10103.55 (9)
O1—S1—C9109.38 (6)C12—C11—C10109.99 (10)
O2—S1—C9107.32 (6)N2—C11—H11111.1
O1—S1—C19107.83 (6)C12—C11—H11111.1
O2—S1—C19107.24 (6)C10—C11—H11111.1
C9—S1—C19104.57 (6)O3—C12—C13122.20 (11)
C7—N1—C1118.60 (11)O3—C12—C11119.79 (11)
C8—N2—C6122.62 (11)C13—C12—C11117.97 (10)
C8—N2—C11111.04 (10)C14—C13—C18119.63 (12)
C6—N2—C11125.38 (10)C14—C13—C12122.25 (11)
C2—C1—N1118.80 (11)C18—C13—C12118.12 (11)
C2—C1—C6119.30 (12)C15—C14—C13119.77 (12)
N1—C1—C6121.90 (12)C15—C14—H14120.1
C3—C2—C1120.36 (12)C13—C14—H14120.1
C3—C2—H2119.8C14—C15—C16120.17 (13)
C1—C2—H2119.8C14—C15—H15119.9
C2—C3—C4119.99 (12)C16—C15—H15119.9
C2—C3—H3120.0C17—C16—C15120.35 (12)
C4—C3—H3120.0C17—C16—H16119.8
C5—C4—C3120.85 (12)C15—C16—H16119.8
C5—C4—H4119.6C18—C17—C16119.83 (12)
C3—C4—H4119.6C18—C17—H17120.1
C4—C5—C6119.35 (12)C16—C17—H17120.1
C4—C5—H5120.3C17—C18—C13120.25 (12)
C6—C5—H5120.3C17—C18—H18119.9
N2—C6—C5122.85 (11)C13—C18—H18119.9
N2—C6—C1117.02 (11)C20—C19—C24121.75 (13)
C5—C6—C1120.12 (12)C20—C19—S1118.75 (11)
N1—C7—C8123.60 (12)C24—C19—S1119.44 (10)
N1—C7—H7118.2C21—C20—C19118.75 (14)
C8—C7—H7118.2C21—C20—H20120.6
C9—C8—N2111.10 (11)C19—C20—H20120.6
C9—C8—C7132.87 (12)C22—C21—C20119.79 (14)
N2—C8—C7116.03 (11)C22—C21—H21120.1
C8—C9—C10110.20 (11)C20—C21—H21120.1
C8—C9—S1127.13 (10)C23—C22—C21121.06 (13)
C10—C9—S1122.27 (9)C23—C22—H22119.5
C9—C10—C11102.46 (10)C21—C22—H22119.5
C9—C10—H10A111.3C22—C23—C24119.98 (15)
C11—C10—H10A111.3C22—C23—H23120.0
C9—C10—H10B111.3C24—C23—H23120.0
C11—C10—H10B111.3C23—C24—C19118.67 (14)
H10A—C10—H10B109.2C23—C24—H24120.7
N2—C11—C12109.74 (10)C19—C24—H24120.7
C7—N1—C1—C2177.83 (12)C8—N2—C11—C12105.72 (11)
C7—N1—C1—C6−1.70 (18)C6—N2—C11—C12−63.24 (15)
N1—C1—C2—C3−178.48 (11)C8—N2—C11—C10−11.67 (13)
C6—C1—C2—C31.06 (19)C6—N2—C11—C10179.38 (11)
C1—C2—C3—C4−1.5 (2)C9—C10—C11—N212.32 (12)
C2—C3—C4—C50.9 (2)C9—C10—C11—C12−104.89 (11)
C3—C4—C5—C60.27 (19)N2—C11—C12—O3−19.31 (16)
C8—N2—C6—C5−175.85 (11)C10—C11—C12—O393.98 (13)
C11—N2—C6—C5−8.11 (19)N2—C11—C12—C13162.91 (10)
C8—N2—C6—C14.95 (17)C10—C11—C12—C13−83.80 (13)
C11—N2—C6—C1172.69 (11)O3—C12—C13—C14−170.10 (12)
C4—C5—C6—N2−179.91 (11)C11—C12—C13—C147.62 (17)
C4—C5—C6—C1−0.74 (18)O3—C12—C13—C189.85 (18)
C2—C1—C6—N2179.30 (11)C11—C12—C13—C18−172.43 (11)
N1—C1—C6—N2−1.17 (17)C18—C13—C14—C15−0.50 (19)
C2—C1—C6—C50.08 (18)C12—C13—C14—C15179.45 (12)
N1—C1—C6—C5179.61 (11)C13—C14—C15—C160.2 (2)
C1—N1—C7—C81.00 (18)C14—C15—C16—C170.3 (2)
C6—N2—C8—C9175.24 (11)C15—C16—C17—C18−0.5 (2)
C11—N2—C8—C95.93 (14)C16—C17—C18—C130.2 (2)
C6—N2—C8—C7−5.56 (17)C14—C13—C18—C170.30 (19)
C11—N2—C8—C7−174.87 (10)C12—C13—C18—C17−179.65 (12)
N1—C7—C8—C9−178.52 (13)O1—S1—C19—C20−24.23 (12)
N1—C7—C8—N22.50 (18)O2—S1—C19—C20−154.13 (10)
N2—C8—C9—C102.97 (15)C9—S1—C19—C2092.12 (11)
C7—C8—C9—C10−176.05 (13)O1—S1—C19—C24158.43 (10)
N2—C8—C9—S1175.80 (9)O2—S1—C19—C2428.53 (12)
C7—C8—C9—S1−3.2 (2)C9—S1—C19—C24−85.22 (11)
O1—S1—C9—C817.24 (14)C24—C19—C20—C21−0.8 (2)
O2—S1—C9—C8148.29 (12)S1—C19—C20—C21−178.08 (10)
C19—S1—C9—C8−98.03 (12)C19—C20—C21—C220.6 (2)
O1—S1—C9—C10−170.72 (10)C20—C21—C22—C230.1 (2)
O2—S1—C9—C10−39.67 (11)C21—C22—C23—C24−0.5 (2)
C19—S1—C9—C1074.02 (11)C22—C23—C24—C190.3 (2)
C8—C9—C10—C11−9.76 (13)C20—C19—C24—C230.4 (2)
S1—C9—C10—C11176.99 (9)S1—C19—C24—C23177.63 (10)
  6 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  Synthesis and biological activity of new quinoxaline antibiotics of echinomycin analogues.

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Journal:  Bioorg Med Chem Lett       Date:  2004-01-19       Impact factor: 2.823

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Potent quinoxaline-based inhibitors of PDGF receptor tyrosine kinase activity. Part 2: the synthesis and biological activities of RPR127963 an orally bioavailable inhibitor.

Authors:  Wei He; Michael R Myers; Barbara Hanney; Alfred P Spada; Glenda Bilder; Helen Galzcinski; Dilip Amin; Saul Needle; Ken Page; Zaid Jayyosi; Mark H Perrone
Journal:  Bioorg Med Chem Lett       Date:  2003-09-15       Impact factor: 2.823

5.  Synthesis and oral antiallergic activity of carboxylic acids derived from imidazo[2,1-c][1,4]benzoxazines, imidazo[1,2-a]quinolines, imidazo[1,2-a]quinoxalines, imidazo[1,2-a]quinoxalinones, pyrrolo[1,2-a]quinoxalinones, pyrrolo[2,3-a]quinoxalinones, and imidazo[2,1-b]benzothiazoles.

Authors:  I R Ager; A C Barnes; G W Danswan; P W Hairsine; D P Kay; P D Kennewell; S S Matharu; P Miller; P Robson; D A Rowlands
Journal:  J Med Chem       Date:  1988-06       Impact factor: 7.446

6.  Quinoxaline: Z' = 1 form.

Authors:  Sathishkumar Ranganathan; Sudarshan Mahapatra; Tejender S Thakur; Gautam R Desiraju
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-09
  6 in total

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