Literature DB >> 22219898

N'-[(1E)-3-Bromo-5-chloro-2-hy-droxy-benzyl-idene]-4-tert-butyl-benzo-hydrazide ethanol monosolvate.

A Thirugnanasundar, K Parthipan, V S Xavier Anthonisamy, G Chakkaravarthi, G Rajagopal.   

Abstract

In the title compound, C(18)H(18)BrClN(2)O(2)·C(2)H(6)O, the hy-droxy group forms an intra-molecular O-H⋯N hydrogen bond, which influences the conformation of the Shiff base mol-ecule, where the two aromatic rings form a dihedral angle of 21.67 (8)°. Inter-molecular N-H⋯O and O-H⋯O hydrogen bonds link two Shiff base mol-ecules and two solvent mol-ecules into a centrosymmetric heterotetra-mer. Weak inter-molecular C-H⋯O inter-actions link further tetra-mers related by translation along the a axis into chains.

Entities:  

Year:  2011        PMID: 22219898      PMCID: PMC3247593          DOI: 10.1107/S160053681104027X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of Schiff base derivatives, see: Dao et al. (2000 ▶); Karthikeyan et al. (2006 ▶); Prabhakaran et al. (2006 ▶); Shivakumar et al. (2008 ▶). For related structures, see: Fun et al. (2008 ▶); Thirugnanasundar et al. (2011 ▶).

Experimental

Crystal data

C18H18BrClN2O2·C2H6O M = 455.77 Triclinic, a = 9.2478 (4) Å b = 9.4057 (4) Å c = 12.7838 (5) Å α = 78.811 (2)° β = 79.235 (1)° γ = 79.469 (2)° V = 1059.17 (8) Å3 Z = 2 Mo Kα radiation μ = 2.09 mm−1 T = 295 K 0.26 × 0.22 × 0.20 mm

Data collection

Bruker Kappa APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.613, T max = 0.680 27712 measured reflections 6728 independent reflections 3460 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.180 S = 1.03 6728 reflections 248 parameters 1 restraint H-atom parameters constrained Δρmax = 0.60 e Å−3 Δρmin = −0.63 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681104027X/cv5157sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681104027X/cv5157Isup2.hkl Supplementary material file. DOI: 10.1107/S160053681104027X/cv5157Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H18BrClN2O2·C2H6OZ = 2
Mr = 455.77F(000) = 468
Triclinic, P1Dx = 1.429 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.2478 (4) ÅCell parameters from 5983 reflections
b = 9.4057 (4) Åθ = 2.2–25.3°
c = 12.7838 (5) ŵ = 2.09 mm1
α = 78.811 (2)°T = 295 K
β = 79.235 (1)°Block, pale yellow
γ = 79.469 (2)°0.26 × 0.22 × 0.20 mm
V = 1059.17 (8) Å3
Bruker Kappa APEXII diffractometer6728 independent reflections
Radiation source: fine-focus sealed tube3460 reflections with I > 2σ(I)
graphiteRint = 0.033
ω and φ scansθmax = 31.1°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −13→13
Tmin = 0.613, Tmax = 0.680k = −13→13
27712 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.180H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0879P)2 + 0.2447P] where P = (Fo2 + 2Fc2)/3
6728 reflections(Δ/σ)max < 0.001
248 parametersΔρmax = 0.60 e Å3
1 restraintΔρmin = −0.63 e Å3
xyzUiso*/Ueq
Br10.93954 (5)0.98169 (6)0.84703 (3)0.1019 (2)
Cl10.49673 (11)1.20251 (9)0.60211 (8)0.0842 (3)
O11.0463 (2)0.8013 (2)0.67203 (17)0.0626 (5)
H11.07570.75170.62390.094*
O21.2797 (2)0.5219 (2)0.52053 (15)0.0637 (5)
N11.0370 (2)0.7096 (2)0.49638 (17)0.0473 (5)
N21.1026 (2)0.6271 (2)0.41810 (17)0.0465 (5)
H21.06460.63260.36070.056*
C10.8540 (3)0.8951 (3)0.5612 (2)0.0467 (6)
C20.9213 (3)0.8912 (3)0.6516 (2)0.0484 (6)
C30.8529 (3)0.9868 (3)0.7243 (2)0.0549 (7)
C40.7247 (3)1.0821 (3)0.7087 (2)0.0575 (7)
H40.68201.14530.75750.069*
C50.6601 (3)1.0831 (3)0.6197 (2)0.0560 (7)
C60.7235 (3)0.9919 (3)0.5463 (2)0.0545 (6)
H60.67910.99480.48620.065*
C70.9190 (3)0.8017 (3)0.4805 (2)0.0504 (6)
H70.87620.80850.41910.060*
C81.2312 (3)0.5359 (3)0.43593 (19)0.0448 (5)
C91.3105 (3)0.4581 (2)0.34618 (19)0.0413 (5)
C101.2420 (3)0.4292 (3)0.2672 (2)0.0461 (5)
H101.14050.46030.26760.055*
C111.3245 (3)0.3540 (3)0.1874 (2)0.0477 (6)
H111.27650.33440.13530.057*
C121.4758 (3)0.3071 (2)0.1826 (2)0.0444 (5)
C131.5416 (3)0.3359 (3)0.2627 (2)0.0538 (6)
H131.64320.30510.26200.065*
C141.4614 (3)0.4091 (3)0.3443 (2)0.0543 (6)
H141.50900.42540.39800.065*
C151.5690 (3)0.2267 (3)0.0933 (2)0.0539 (6)
C161.4789 (5)0.2141 (5)0.0085 (3)0.0977 (13)
H16A1.43790.3103−0.02380.146*
H16B1.39950.15930.04180.146*
H16C1.54230.1646−0.04610.146*
C171.7001 (5)0.3051 (4)0.0402 (3)0.0918 (13)
H17A1.66480.40660.01640.138*
H17B1.75200.2610−0.02080.138*
H17C1.76640.29710.09120.138*
C181.6298 (4)0.0714 (3)0.1443 (3)0.0780 (10)
H18A1.69360.02200.08980.117*
H18B1.54840.01840.17560.117*
H18C1.68540.07650.19950.117*
O30.8792 (3)0.6125 (3)0.29413 (18)0.0786 (7)
H30.82950.56670.34510.118*
C190.9211 (6)0.6211 (10)0.1011 (4)0.163 (3)
H19A0.99670.68140.09440.244*
H19B0.86960.65070.04000.244*
H19C0.96650.52040.10400.244*
C200.8100 (5)0.6384 (8)0.2050 (3)0.1222 (18)
H20A0.75490.73700.19780.147*
H20B0.73930.57050.21490.147*
U11U22U33U12U13U23
Br10.0838 (3)0.1505 (4)0.0874 (3)0.0068 (3)−0.0185 (2)−0.0770 (3)
Cl10.0797 (6)0.0691 (5)0.0899 (6)0.0249 (4)−0.0068 (5)−0.0198 (4)
O10.0522 (11)0.0749 (12)0.0641 (12)0.0052 (9)−0.0073 (9)−0.0354 (10)
O20.0541 (11)0.0963 (15)0.0461 (10)−0.0032 (10)−0.0084 (9)−0.0323 (10)
N10.0503 (12)0.0485 (11)0.0446 (11)−0.0085 (9)0.0045 (9)−0.0216 (9)
N20.0493 (12)0.0500 (11)0.0411 (11)−0.0020 (9)0.0002 (9)−0.0220 (9)
C10.0482 (13)0.0412 (12)0.0482 (14)−0.0070 (10)0.0069 (11)−0.0151 (10)
C20.0495 (14)0.0473 (13)0.0482 (14)−0.0119 (11)0.0062 (11)−0.0169 (11)
C30.0543 (15)0.0617 (15)0.0511 (15)−0.0137 (12)0.0077 (12)−0.0259 (12)
C40.0598 (17)0.0504 (14)0.0588 (16)−0.0089 (12)0.0159 (13)−0.0242 (12)
C50.0571 (16)0.0425 (13)0.0598 (17)0.0001 (11)0.0065 (13)−0.0101 (11)
C60.0605 (17)0.0486 (13)0.0510 (15)−0.0019 (12)−0.0039 (12)−0.0104 (11)
C70.0589 (16)0.0480 (13)0.0443 (13)−0.0057 (11)−0.0001 (11)−0.0176 (11)
C80.0428 (13)0.0531 (13)0.0409 (13)−0.0103 (10)0.0002 (10)−0.0170 (10)
C90.0417 (12)0.0429 (11)0.0392 (12)−0.0056 (9)−0.0007 (9)−0.0129 (9)
C100.0396 (12)0.0534 (13)0.0459 (13)0.0008 (10)−0.0040 (10)−0.0201 (11)
C110.0468 (14)0.0540 (13)0.0447 (13)0.0002 (10)−0.0079 (11)−0.0208 (11)
C120.0454 (13)0.0399 (11)0.0456 (13)−0.0036 (9)0.0018 (10)−0.0129 (10)
C130.0358 (12)0.0667 (16)0.0591 (16)0.0023 (11)−0.0039 (11)−0.0235 (13)
C140.0455 (14)0.0695 (16)0.0521 (15)−0.0036 (12)−0.0103 (11)−0.0226 (13)
C150.0535 (15)0.0503 (13)0.0554 (15)−0.0023 (11)0.0069 (12)−0.0226 (12)
C160.093 (3)0.124 (3)0.082 (2)0.017 (2)−0.009 (2)−0.068 (2)
C170.099 (3)0.075 (2)0.091 (3)−0.0283 (19)0.048 (2)−0.0345 (19)
C180.077 (2)0.0517 (16)0.095 (3)0.0024 (14)0.0109 (19)−0.0212 (16)
O30.0644 (14)0.1174 (19)0.0548 (12)−0.0080 (13)−0.0132 (10)−0.0176 (12)
C190.104 (4)0.311 (10)0.079 (3)−0.029 (5)−0.018 (3)−0.046 (5)
C200.096 (3)0.195 (6)0.079 (3)−0.014 (3)−0.029 (3)−0.027 (3)
Br1—C31.880 (3)C12—C131.376 (4)
Cl1—C51.733 (3)C12—C151.532 (3)
O1—C21.338 (3)C13—C141.385 (4)
O1—H10.8200C13—H130.9300
O2—C81.221 (3)C14—H140.9300
N1—C71.285 (3)C15—C171.516 (4)
N1—N21.369 (3)C15—C161.519 (5)
N2—C81.362 (3)C15—C181.530 (4)
N2—H20.8601C16—H16A0.9600
C1—C61.392 (4)C16—H16B0.9600
C1—C21.404 (4)C16—H16C0.9600
C1—C71.457 (3)C17—H17A0.9600
C2—C31.402 (3)C17—H17B0.9600
C3—C41.371 (4)C17—H17C0.9600
C4—C51.378 (4)C18—H18A0.9600
C4—H40.9300C18—H18B0.9600
C5—C61.372 (4)C18—H18C0.9600
C6—H60.9300O3—C201.369 (5)
C7—H70.9300O3—H30.8201
C8—C91.485 (3)C19—C201.5362 (10)
C9—C101.379 (3)C19—H19A0.9600
C9—C141.385 (4)C19—H19B0.9600
C10—C111.384 (3)C19—H19C0.9600
C10—H100.9300C20—H20A0.9700
C11—C121.381 (4)C20—H20B0.9700
C11—H110.9300
C2—O1—H1109.5C12—C13—H13118.9
C7—N1—N2118.4 (2)C14—C13—H13118.9
C8—N2—N1116.5 (2)C13—C14—C9120.0 (2)
C8—N2—H2121.8C13—C14—H14120.0
N1—N2—H2121.8C9—C14—H14120.0
C6—C1—C2119.7 (2)C17—C15—C16109.8 (3)
C6—C1—C7118.7 (3)C17—C15—C18108.2 (3)
C2—C1—C7121.5 (2)C16—C15—C18107.9 (3)
O1—C2—C3118.6 (3)C17—C15—C12109.6 (2)
O1—C2—C1123.5 (2)C16—C15—C12112.6 (2)
C3—C2—C1117.9 (2)C18—C15—C12108.6 (2)
C4—C3—C2121.9 (3)C15—C16—H16A109.5
C4—C3—Br1119.4 (2)C15—C16—H16B109.5
C2—C3—Br1118.6 (2)H16A—C16—H16B109.5
C3—C4—C5119.1 (2)C15—C16—H16C109.5
C3—C4—H4120.4H16A—C16—H16C109.5
C5—C4—H4120.4H16B—C16—H16C109.5
C6—C5—C4120.9 (3)C15—C17—H17A109.5
C6—C5—Cl1120.5 (3)C15—C17—H17B109.5
C4—C5—Cl1118.6 (2)H17A—C17—H17B109.5
C5—C6—C1120.4 (3)C15—C17—H17C109.5
C5—C6—H6119.8H17A—C17—H17C109.5
C1—C6—H6119.8H17B—C17—H17C109.5
N1—C7—C1118.3 (2)C15—C18—H18A109.5
N1—C7—H7120.8C15—C18—H18B109.5
C1—C7—H7120.8H18A—C18—H18B109.5
O2—C8—N2121.4 (2)C15—C18—H18C109.5
O2—C8—C9122.2 (2)H18A—C18—H18C109.5
N2—C8—C9116.4 (2)H18B—C18—H18C109.5
C10—C9—C14118.8 (2)C20—O3—H3109.6
C10—C9—C8123.9 (2)C20—C19—H19A109.5
C14—C9—C8117.3 (2)C20—C19—H19B109.5
C9—C10—C11119.9 (2)H19A—C19—H19B109.5
C9—C10—H10120.0C20—C19—H19C109.5
C11—C10—H10120.0H19A—C19—H19C109.5
C12—C11—C10122.3 (2)H19B—C19—H19C109.5
C12—C11—H11118.9O3—C20—C19112.2 (4)
C10—C11—H11118.9O3—C20—H20A109.2
C13—C12—C11116.8 (2)C19—C20—H20A109.2
C13—C12—C15120.4 (2)O3—C20—H20B109.2
C11—C12—C15122.8 (2)C19—C20—H20B109.2
C12—C13—C14122.1 (2)H20A—C20—H20B107.9
C7—N1—N2—C8177.0 (2)N1—N2—C8—C9−173.9 (2)
C6—C1—C2—O1179.8 (2)O2—C8—C9—C10157.1 (3)
C7—C1—C2—O1−1.4 (4)N2—C8—C9—C10−24.4 (4)
C6—C1—C2—C30.0 (4)O2—C8—C9—C14−21.3 (4)
C7—C1—C2—C3178.8 (2)N2—C8—C9—C14157.2 (2)
O1—C2—C3—C4179.9 (2)C14—C9—C10—C11−0.7 (4)
C1—C2—C3—C4−0.3 (4)C8—C9—C10—C11−179.0 (2)
O1—C2—C3—Br1−0.6 (3)C9—C10—C11—C12−0.8 (4)
C1—C2—C3—Br1179.15 (19)C10—C11—C12—C131.3 (4)
C2—C3—C4—C50.8 (4)C10—C11—C12—C15−178.6 (2)
Br1—C3—C4—C5−178.6 (2)C11—C12—C13—C14−0.4 (4)
C3—C4—C5—C6−1.0 (4)C15—C12—C13—C14179.5 (3)
C3—C4—C5—Cl1179.1 (2)C12—C13—C14—C9−1.1 (4)
C4—C5—C6—C10.8 (4)C10—C9—C14—C131.6 (4)
Cl1—C5—C6—C1−179.4 (2)C8—C9—C14—C13−180.0 (3)
C2—C1—C6—C5−0.3 (4)C13—C12—C15—C17−53.7 (4)
C7—C1—C6—C5−179.1 (2)C11—C12—C15—C17126.2 (3)
N2—N1—C7—C1−176.7 (2)C13—C12—C15—C16−176.2 (3)
C6—C1—C7—N1−178.0 (2)C11—C12—C15—C163.7 (4)
C2—C1—C7—N13.2 (4)C13—C12—C15—C1864.3 (3)
N1—N2—C8—O24.6 (4)C11—C12—C15—C18−115.8 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.821.862.577 (3)145
N2—H2···O30.862.102.865 (3)147
O3—H3···O2i0.821.942.755 (3)171
C14—H14···O2ii0.932.543.418 (3)157
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.821.862.577 (3)145
N2—H2⋯O30.862.102.865 (3)147
O3—H3⋯O2i0.821.942.755 (3)171
C14—H14⋯O2ii0.932.543.418 (3)157

Symmetry codes: (i) ; (ii) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Mari Sithambaram Karthikeyan; Dasappa Jagadeesh Prasad; Boja Poojary; K Subrahmanya Bhat; Bantwal Shivarama Holla; Nalilu Suchetha Kumari
Journal:  Bioorg Med Chem       Date:  2006-08-01       Impact factor: 3.641

3.  Synthesis and cytotoxicity of gossypol related compounds.

Authors:  V T Dao; C Gaspard; M Mayer; G H Werner; S N Nguyen; R J Michelot
Journal:  Eur J Med Chem       Date:  2000-09       Impact factor: 6.514

4.  4-Chloro-N'-[(Z)-4-(dimethyl-amino)benzyl-idene]benzohydrazide mono-hydrate.

Authors:  Hoong-Kun Fun; P S Patil; Samuel Robinson Jebas; K V Sujith; B Kalluraya
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-26

5.  N'-[(E)-2-Hy-droxy-3,5-diiodo-benzyl-idene]pyridine-3-carbohydrazide.

Authors:  A Thirugnanasundar; J Suresh; A Ramu; G Rajagopal
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-11

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total

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