| Literature DB >> 22219860 |
Hacali Necefoğlu, Vijdan Oztürk, Füreya Elif Ozbek, Vedat Adıgüzel, Tuncer Hökelek.
Abstract
In the mononuclear Ni(II) title complex, [Ni(C(7)H(4)FO(2))(2)(C(6)H(6)N(2)O)(2)(H(2)O)(2)], the Ni(II) atom, located on an inversion center, is coordinated by two nicotinamide and two 4-fluoro-benzoate ligands and two water mol-ecules in a distorted N(2)O(4) octa-hedral geometry. The dihedral angle between the carboxyl-ate group and the adjacent benzene ring is 8.95 (8)°, while the pyridine ring and the benzene ring are oriented at a dihedral angle of 75.01 (7)°. The water mol-ecule links the adjacent carboxyl-ate O atom via an intra-molecular O-H⋯O hydrogen bond. In the crystal, O-H⋯O, N-H⋯O, C-H⋯O and C-H⋯F hydrogen bonds link the mol-ecules into a three-dimensional network. π-π stacking between parallel pyridine rings [centroid-centroid distance = 3.7287 (11) Å] is also observed.Entities:
Year: 2011 PMID: 22219860 PMCID: PMC3247555 DOI: 10.1107/S1600536811044771
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C7H4FO2)2(C6H6N2O)2(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 6642 reflections |
| θ = 2.4–28.5° | |
| µ = 0.83 mm−1 | |
| β = 136.080 (2)° | Block, blue |
| 0.29 × 0.22 × 0.18 mm | |
| Bruker Kappa APEXII CCD area-detector diffractometer | 3220 independent reflections |
| Radiation source: fine-focus sealed tube | 2874 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.5°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 11926 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3220 reflections | (Δ/σ)max < 0.001 |
| 203 parameters | Δρmax = 0.46 e Å−3 |
| 0 restraints | Δρmin = −0.57 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Ni1 | 0.0000 | 0.5000 | 0.5000 | 0.00935 (8) | |
| O1 | 0.18950 (11) | 0.45525 (13) | 0.66805 (8) | 0.0129 (2) | |
| O2 | 0.35932 (12) | 0.35155 (14) | 0.66999 (8) | 0.0182 (2) | |
| O3 | 0.04376 (12) | 1.15787 (12) | 0.34180 (8) | 0.0152 (2) | |
| O4 | 0.11757 (12) | 0.41708 (13) | 0.46215 (8) | 0.0127 (2) | |
| H41 | 0.088 (2) | 0.333 (2) | 0.4293 (16) | 0.020 (5)* | |
| H42 | 0.209 (3) | 0.398 (3) | 0.532 (2) | 0.049 (7)* | |
| N1 | 0.08897 (13) | 0.71649 (14) | 0.52032 (9) | 0.0114 (2) | |
| N2 | −0.00057 (17) | 0.93579 (17) | 0.26006 (11) | 0.0180 (3) | |
| H21 | 0.003 (2) | 0.841 (3) | 0.2615 (17) | 0.030 (6)* | |
| H22 | −0.033 (3) | 0.984 (3) | 0.203 (2) | 0.037 (6)* | |
| F1 | 0.65268 (11) | 0.13200 (13) | 1.13785 (7) | 0.0274 (2) | |
| C1 | 0.31188 (15) | 0.37925 (17) | 0.71362 (11) | 0.0124 (3) | |
| C2 | 0.40420 (15) | 0.31422 (18) | 0.82813 (11) | 0.0132 (3) | |
| C3 | 0.36738 (18) | 0.3548 (2) | 0.88572 (12) | 0.0192 (3) | |
| H3 | 0.2866 | 0.4236 | 0.8538 | 0.023* | |
| C4 | 0.45092 (19) | 0.2929 (2) | 0.99065 (12) | 0.0229 (4) | |
| H4 | 0.4270 | 0.3190 | 1.0296 | 0.027* | |
| C5 | 0.56940 (17) | 0.1923 (2) | 1.03506 (11) | 0.0185 (3) | |
| C6 | 0.60852 (17) | 0.14784 (19) | 0.98051 (12) | 0.0176 (3) | |
| H6 | 0.6885 | 0.0779 | 1.0127 | 0.021* | |
| C7 | 0.52424 (16) | 0.21111 (18) | 0.87575 (11) | 0.0152 (3) | |
| H7 | 0.5487 | 0.1840 | 0.8372 | 0.018* | |
| C8 | 0.18734 (16) | 0.78640 (18) | 0.62049 (11) | 0.0130 (3) | |
| H8 | 0.2178 | 0.7358 | 0.6813 | 0.016* | |
| C9 | 0.24541 (16) | 0.93048 (18) | 0.63733 (11) | 0.0141 (3) | |
| H9 | 0.3144 | 0.9750 | 0.7082 | 0.017* | |
| C10 | 0.19927 (17) | 1.00725 (17) | 0.54715 (12) | 0.0130 (3) | |
| H10 | 0.2353 | 1.1048 | 0.5560 | 0.016* | |
| C11 | 0.09784 (15) | 0.93567 (17) | 0.44284 (11) | 0.0107 (3) | |
| C12 | 0.04647 (15) | 0.79094 (17) | 0.43349 (11) | 0.0112 (3) | |
| H12 | −0.0205 | 0.7430 | 0.3639 | 0.013* | |
| C13 | 0.04432 (16) | 1.01818 (17) | 0.34384 (11) | 0.0121 (3) |
| Ni1 | 0.01259 (13) | 0.00808 (15) | 0.00725 (12) | −0.00057 (10) | 0.00710 (10) | 0.00028 (9) |
| O1 | 0.0143 (4) | 0.0119 (5) | 0.0089 (4) | 0.0004 (4) | 0.0072 (4) | 0.0005 (4) |
| O2 | 0.0158 (5) | 0.0271 (7) | 0.0124 (4) | 0.0011 (5) | 0.0104 (4) | 0.0016 (5) |
| O3 | 0.0245 (5) | 0.0088 (5) | 0.0148 (4) | −0.0002 (4) | 0.0149 (4) | 0.0003 (4) |
| O4 | 0.0166 (5) | 0.0115 (6) | 0.0104 (4) | −0.0011 (4) | 0.0098 (4) | −0.0014 (4) |
| N1 | 0.0136 (5) | 0.0107 (6) | 0.0113 (5) | −0.0001 (5) | 0.0094 (4) | 0.0003 (5) |
| N2 | 0.0330 (7) | 0.0096 (7) | 0.0146 (6) | −0.0006 (6) | 0.0183 (6) | 0.0000 (5) |
| F1 | 0.0278 (5) | 0.0348 (6) | 0.0115 (4) | 0.0072 (5) | 0.0114 (4) | 0.0094 (4) |
| C1 | 0.0127 (6) | 0.0111 (7) | 0.0097 (5) | −0.0039 (6) | 0.0068 (5) | −0.0015 (5) |
| C2 | 0.0127 (6) | 0.0146 (8) | 0.0098 (5) | −0.0017 (6) | 0.0073 (5) | −0.0007 (5) |
| C3 | 0.0187 (7) | 0.0240 (9) | 0.0143 (6) | 0.0063 (7) | 0.0117 (6) | 0.0035 (6) |
| C4 | 0.0254 (7) | 0.0318 (10) | 0.0152 (6) | 0.0062 (8) | 0.0159 (6) | 0.0027 (7) |
| C5 | 0.0176 (6) | 0.0214 (9) | 0.0092 (6) | 0.0001 (7) | 0.0072 (5) | 0.0030 (6) |
| C6 | 0.0143 (6) | 0.0181 (8) | 0.0147 (6) | 0.0036 (6) | 0.0086 (5) | 0.0032 (6) |
| C7 | 0.0146 (6) | 0.0169 (8) | 0.0135 (6) | −0.0008 (6) | 0.0100 (5) | −0.0004 (6) |
| C8 | 0.0154 (6) | 0.0130 (8) | 0.0103 (5) | 0.0009 (6) | 0.0091 (5) | 0.0007 (5) |
| C9 | 0.0164 (6) | 0.0140 (8) | 0.0103 (5) | −0.0015 (6) | 0.0091 (5) | −0.0018 (6) |
| C10 | 0.0163 (6) | 0.0097 (7) | 0.0139 (6) | −0.0016 (6) | 0.0112 (6) | −0.0011 (5) |
| C11 | 0.0130 (6) | 0.0110 (7) | 0.0105 (5) | 0.0021 (6) | 0.0092 (5) | 0.0023 (5) |
| C12 | 0.0132 (6) | 0.0112 (7) | 0.0097 (5) | 0.0001 (6) | 0.0085 (5) | −0.0004 (5) |
| C13 | 0.0146 (6) | 0.0122 (7) | 0.0114 (6) | 0.0001 (6) | 0.0100 (5) | 0.0005 (5) |
| Ni1—O1 | 2.0500 (9) | C2—C7 | 1.386 (2) |
| Ni1—O1i | 2.0500 (9) | C3—C4 | 1.390 (2) |
| Ni1—O4 | 2.0872 (10) | C3—H3 | 0.9300 |
| Ni1—O4i | 2.0872 (10) | C4—H4 | 0.9300 |
| Ni1—N1 | 2.1033 (13) | C5—C4 | 1.369 (2) |
| Ni1—N1i | 2.1033 (13) | C6—C5 | 1.378 (2) |
| O1—C1 | 1.2695 (18) | C6—C7 | 1.3906 (19) |
| O2—C1 | 1.2560 (16) | C6—H6 | 0.9300 |
| O3—C13 | 1.2363 (18) | C7—H7 | 0.9300 |
| O4—H41 | 0.84 (2) | C8—C9 | 1.384 (2) |
| O4—H42 | 0.88 (3) | C8—H8 | 0.9300 |
| N1—C8 | 1.3421 (17) | C9—C10 | 1.3830 (19) |
| N1—C12 | 1.3435 (17) | C9—H9 | 0.9300 |
| N2—C13 | 1.3264 (19) | C10—C11 | 1.3930 (19) |
| N2—H21 | 0.84 (2) | C10—H10 | 0.9300 |
| N2—H22 | 0.86 (2) | C12—C11 | 1.383 (2) |
| F1—C5 | 1.3570 (16) | C12—H12 | 0.9300 |
| C1—C2 | 1.5051 (18) | C13—C11 | 1.4970 (18) |
| C2—C3 | 1.3939 (19) | ||
| O1i—Ni1—O1 | 180.0 | C4—C3—C2 | 120.28 (14) |
| O1—Ni1—O4 | 92.09 (4) | C4—C3—H3 | 119.9 |
| O1i—Ni1—O4 | 87.91 (4) | C3—C4—H4 | 120.9 |
| O1—Ni1—O4i | 87.91 (4) | C5—C4—C3 | 118.16 (13) |
| O1i—Ni1—O4i | 92.09 (4) | C5—C4—H4 | 120.9 |
| O1—Ni1—N1 | 91.03 (4) | F1—C5—C4 | 118.72 (13) |
| O1i—Ni1—N1 | 88.97 (4) | F1—C5—C6 | 117.82 (14) |
| O1—Ni1—N1i | 88.97 (4) | C4—C5—C6 | 123.46 (13) |
| O1i—Ni1—N1i | 91.03 (4) | C5—C6—C7 | 117.73 (14) |
| O4—Ni1—O4i | 180.00 (5) | C5—C6—H6 | 121.1 |
| O4—Ni1—N1 | 89.05 (4) | C7—C6—H6 | 121.1 |
| O4i—Ni1—N1 | 90.95 (4) | C2—C7—C6 | 120.67 (13) |
| O4—Ni1—N1i | 90.95 (4) | C2—C7—H7 | 119.7 |
| O4i—Ni1—N1i | 89.05 (4) | C6—C7—H7 | 119.7 |
| N1i—Ni1—N1 | 180.00 (8) | N1—C8—C9 | 122.88 (13) |
| C1—O1—Ni1 | 127.09 (9) | N1—C8—H8 | 118.6 |
| Ni1—O4—H41 | 117.0 (13) | C9—C8—H8 | 118.6 |
| Ni1—O4—H42 | 97.2 (15) | C8—C9—H9 | 120.5 |
| H41—O4—H42 | 105 (2) | C10—C9—C8 | 118.96 (13) |
| C8—N1—Ni1 | 120.72 (9) | C10—C9—H9 | 120.5 |
| C8—N1—C12 | 117.81 (13) | C9—C10—C11 | 118.73 (14) |
| C12—N1—Ni1 | 121.44 (9) | C9—C10—H10 | 120.6 |
| C13—N2—H21 | 123.2 (14) | C11—C10—H10 | 120.6 |
| C13—N2—H22 | 116.9 (15) | C10—C11—C13 | 119.43 (13) |
| H21—N2—H22 | 120 (2) | C12—C11—C10 | 118.63 (12) |
| O1—C1—C2 | 116.65 (12) | C12—C11—C13 | 121.92 (12) |
| O2—C1—O1 | 125.40 (12) | N1—C12—C11 | 122.98 (12) |
| O2—C1—C2 | 117.93 (13) | N1—C12—H12 | 118.5 |
| C3—C2—C1 | 120.28 (13) | C11—C12—H12 | 118.5 |
| C7—C2—C1 | 120.01 (12) | O3—C13—N2 | 121.96 (13) |
| C7—C2—C3 | 119.70 (13) | O3—C13—C11 | 120.56 (12) |
| C2—C3—H3 | 119.9 | N2—C13—C11 | 117.48 (14) |
| O4—Ni1—O1—C1 | −10.42 (12) | O2—C1—C2—C7 | −8.4 (2) |
| O4i—Ni1—O1—C1 | 169.58 (12) | C1—C2—C3—C4 | 178.94 (15) |
| N1—Ni1—O1—C1 | −99.50 (12) | C7—C2—C3—C4 | 0.3 (2) |
| N1i—Ni1—O1—C1 | 80.50 (12) | C1—C2—C7—C6 | −178.74 (14) |
| O1—Ni1—N1—C8 | −24.63 (11) | C3—C2—C7—C6 | −0.1 (2) |
| O1i—Ni1—N1—C8 | 155.37 (11) | C2—C3—C4—C5 | 0.2 (3) |
| O1—Ni1—N1—C12 | 157.13 (10) | F1—C5—C4—C3 | 179.47 (15) |
| O1i—Ni1—N1—C12 | −22.87 (10) | C6—C5—C4—C3 | −1.0 (3) |
| O4—Ni1—N1—C8 | −116.70 (11) | C7—C6—C5—F1 | −179.28 (14) |
| O4i—Ni1—N1—C8 | 63.30 (11) | C7—C6—C5—C4 | 1.2 (3) |
| O4—Ni1—N1—C12 | 65.06 (10) | C5—C6—C7—C2 | −0.6 (2) |
| O4i—Ni1—N1—C12 | −114.94 (10) | N1—C8—C9—C10 | 0.7 (2) |
| Ni1—O1—C1—O2 | 20.1 (2) | C8—C9—C10—C11 | −1.0 (2) |
| Ni1—O1—C1—C2 | −158.24 (10) | C9—C10—C11—C12 | 0.4 (2) |
| Ni1—N1—C8—C9 | −178.10 (10) | C9—C10—C11—C13 | 178.87 (13) |
| C12—N1—C8—C9 | 0.2 (2) | N1—C12—C11—C10 | 0.5 (2) |
| Ni1—N1—C12—C11 | 177.43 (10) | N1—C12—C11—C13 | −177.86 (12) |
| C8—N1—C12—C11 | −0.86 (19) | O3—C13—C11—C10 | −23.7 (2) |
| O1—C1—C2—C3 | −8.6 (2) | O3—C13—C11—C12 | 154.64 (13) |
| O1—C1—C2—C7 | 170.00 (14) | N2—C13—C11—C10 | 155.73 (14) |
| O2—C1—C2—C3 | 172.92 (14) | N2—C13—C11—C12 | −25.9 (2) |
| H··· | ||||
| N2—H21···O3ii | 0.84 (3) | 2.15 (3) | 2.8363 (19) | 139 (2) |
| N2—H22···O4iii | 0.86 (3) | 2.28 (3) | 2.955 (2) | 135 (2) |
| O4—H41···O3iv | 0.841 (18) | 1.94 (2) | 2.7654 (16) | 166 (3) |
| O4—H42···O2 | 0.88 (3) | 1.70 (2) | 2.5663 (14) | 168 (4) |
| C6—H6···O4v | 0.93 | 2.52 | 3.402 (3) | 159 |
| C8—H8···F1vi | 0.93 | 2.53 | 3.1358 (18) | 123 |
| C9—H9···F1vi | 0.93 | 2.55 | 3.129 (2) | 121 |
| C10—H10···O2vii | 0.93 | 2.57 | 3.4060 (19) | 150 |
Selected bond lengths (Å)
| Ni1—O1 | 2.0500 (9) |
| Ni1—O4 | 2.0872 (10) |
| Ni1—N1 | 2.1033 (13) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H21⋯O3i | 0.84 (3) | 2.15 (3) | 2.8363 (19) | 139 (2) |
| N2—H22⋯O4ii | 0.86 (3) | 2.28 (3) | 2.955 (2) | 135 (2) |
| O4—H41⋯O3iii | 0.841 (18) | 1.94 (2) | 2.7654 (16) | 166 (3) |
| O4—H42⋯O2 | 0.88 (3) | 1.70 (2) | 2.5663 (14) | 168 (4) |
| C6—H6⋯O4iv | 0.93 | 2.52 | 3.402 (3) | 159 |
| C8—H8⋯F1v | 0.93 | 2.53 | 3.1358 (18) | 123 |
| C9—H9⋯F1v | 0.93 | 2.55 | 3.129 (2) | 121 |
| C10—H10⋯O2vi | 0.93 | 2.57 | 3.4060 (19) | 150 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .