Literature DB >> 22219842

(2-{[1-(Pyridin-2-yl)ethyl-idene]amino-meth-yl}pyridine-κN,N',N'')bis-(thio-cyanato-κN)zinc.

Chen-Yi Wang1, Jing-Fen Li, Xiang Wu, Hai-Yu Tu, Pei-Fei Zhu.   

Abstract

The complete mol-ecule of the title mononuclear zinc(II) complex, [Zn(NCS)(2)(C(13)H(13)N(3))], is generated by crystallographic twofold symmetry, with the metal atom lying on the rotation axis. The pendant methyl group of the ligand is statistically disordered over two sites. The Zn(2+) cation is coordinated by the N,N',N''-tridentate Schiff base ligand, and by two thio-cyanate N atoms, forming a distorted ZnN(5) trigonal-bipyramidal geometry.

Entities:  

Year:  2011        PMID: 22219842      PMCID: PMC3247537          DOI: 10.1107/S1600536811043984

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For Schiff-base complexes reported by us, see: Wang & Ye (2011 ▶); Wang (2009 ▶); Wang et al. (2011 ▶). For similar zinc(II) complexes, see: Wang (2010 ▶); Huang (2011 ▶); Ikmal Hisham et al. (2011 ▶); Wang (2011 ▶).

Experimental

Crystal data

[Zn(NCS)2(C13H13N3)] M = 392.79 Monoclinic, a = 14.272 (3) Å b = 8.633 (3) Å c = 15.338 (3) Å β = 110.945 (2)° V = 1764.9 (8) Å3 Z = 4 Mo Kα radiation μ = 1.63 mm−1 T = 298 K 0.17 × 0.13 × 0.12 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.769, T max = 0.828 3113 measured reflections 1838 independent reflections 1395 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.109 S = 1.07 1838 reflections 111 parameters H-atom parameters constrained Δρmax = 0.59 e Å−3 Δρmin = −0.40 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811043984/hb6391sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811043984/hb6391Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(NCS)2(C13H13N3)]F(000) = 800
Mr = 392.79Dx = 1.478 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
a = 14.272 (3) ÅCell parameters from 1062 reflections
b = 8.633 (3) Åθ = 2.6–24.5°
c = 15.338 (3) ŵ = 1.63 mm1
β = 110.945 (2)°T = 298 K
V = 1764.9 (8) Å3Block, colorless
Z = 40.17 × 0.13 × 0.12 mm
Bruker SMART CCD diffractometer1838 independent reflections
Radiation source: fine-focus sealed tube1395 reflections with I > 2σ(I)
graphiteRint = 0.023
ω scanθmax = 27.0°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −17→13
Tmin = 0.769, Tmax = 0.828k = −10→7
3113 measured reflectionsl = −19→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.109H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0552P)2 + 0.5867P] where P = (Fo2 + 2Fc2)/3
1838 reflections(Δ/σ)max < 0.001
111 parametersΔρmax = 0.59 e Å3
0 restraintsΔρmin = −0.40 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Zn10.50000.64025 (5)0.25000.0552 (2)
S10.28816 (12)0.97184 (15)0.33736 (10)0.1135 (5)
N10.42235 (19)0.5802 (3)0.10557 (18)0.0607 (6)
N20.50000.3998 (4)0.25000.0635 (10)
N30.3999 (2)0.7781 (3)0.2707 (2)0.0700 (7)
C10.3860 (3)0.6806 (4)0.0353 (3)0.0768 (10)
H10.39240.78620.04810.092*
C20.3395 (3)0.6326 (5)−0.0556 (3)0.0885 (12)
H20.31370.7045−0.10340.106*
C30.3318 (3)0.4777 (6)−0.0745 (3)0.0943 (13)
H30.30190.4425−0.13550.113*
C40.3682 (3)0.3755 (5)−0.0031 (3)0.0822 (11)
H40.36240.2695−0.01470.099*
C50.4139 (2)0.4294 (4)0.0865 (2)0.0622 (8)
C60.4563 (3)0.3228 (4)0.1674 (3)0.0693 (9)0.50
C70.4455 (7)0.1605 (7)0.1517 (7)0.093 (3)0.50
H7A0.50400.10850.19310.140*0.50
H7B0.43820.13860.08820.140*0.50
H7C0.38730.12480.16310.140*0.50
C6'0.4563 (3)0.3228 (4)0.1674 (3)0.0693 (9)0.50
H6'10.40300.25730.17200.083*0.50
H6'20.50590.25640.15660.083*0.50
C80.3551 (3)0.8592 (4)0.2993 (2)0.0608 (8)
U11U22U33U12U13U23
Zn10.0596 (3)0.0491 (3)0.0609 (3)0.0000.0265 (2)0.000
S10.1452 (12)0.1040 (9)0.1163 (9)0.0557 (8)0.0772 (9)0.0132 (7)
N10.0577 (16)0.0650 (15)0.0630 (16)0.0002 (13)0.0260 (12)−0.0040 (12)
N20.064 (2)0.054 (2)0.074 (3)0.0000.0264 (19)0.000
N30.0687 (18)0.0654 (17)0.0806 (19)0.0099 (14)0.0323 (15)−0.0043 (15)
C10.083 (3)0.076 (2)0.073 (2)0.0081 (19)0.029 (2)0.0052 (18)
C20.088 (3)0.112 (3)0.064 (2)0.011 (2)0.024 (2)0.007 (2)
C30.092 (3)0.123 (4)0.064 (2)0.008 (3)0.023 (2)−0.018 (2)
C40.084 (3)0.084 (3)0.076 (2)−0.003 (2)0.026 (2)−0.021 (2)
C50.0584 (19)0.0672 (19)0.065 (2)−0.0004 (16)0.0263 (16)−0.0130 (16)
C60.068 (2)0.063 (2)0.079 (2)−0.0014 (16)0.0287 (18)−0.0115 (16)
C70.115 (7)0.052 (4)0.104 (6)0.001 (4)0.027 (5)−0.003 (4)
C6'0.068 (2)0.063 (2)0.079 (2)−0.0014 (16)0.0287 (18)−0.0115 (16)
C80.064 (2)0.0590 (18)0.0593 (18)0.0067 (16)0.0224 (15)0.0074 (15)
Zn1—N3i1.970 (3)C1—H10.9300
Zn1—N31.970 (3)C2—C31.364 (5)
Zn1—N22.076 (4)C2—H20.9300
Zn1—N1i2.156 (3)C3—C41.356 (6)
Zn1—N12.156 (3)C3—H30.9300
S1—C81.612 (3)C4—C51.374 (5)
N1—C51.330 (4)C4—H40.9300
N1—C11.336 (4)C5—C61.489 (5)
N2—C6'i1.368 (4)C6—C71.421 (7)
N2—C6i1.368 (4)C7—H7A0.9600
N2—C61.368 (4)C7—H7B0.9600
N3—C81.136 (4)C7—H7C0.9600
C1—C21.376 (5)
N3i—Zn1—N3105.66 (17)N1—C1—C2122.0 (4)
N3i—Zn1—N2127.17 (9)N1—C1—H1119.0
N3—Zn1—N2127.17 (9)C2—C1—H1119.0
N3i—Zn1—N1i100.08 (11)C3—C2—C1118.9 (4)
N3—Zn1—N1i96.64 (11)C3—C2—H2120.5
N2—Zn1—N1i76.08 (8)C1—C2—H2120.5
N3i—Zn1—N196.64 (11)C4—C3—C2119.2 (4)
N3—Zn1—N1100.08 (11)C4—C3—H3120.4
N2—Zn1—N176.08 (8)C2—C3—H3120.4
N1i—Zn1—N1152.16 (16)C3—C4—C5119.6 (4)
C5—N1—C1118.6 (3)C3—C4—H4120.2
C5—N1—Zn1115.8 (2)C5—C4—H4120.2
C1—N1—Zn1125.6 (3)N1—C5—C4121.7 (3)
C6'i—N2—C6i0.0 (3)N1—C5—C6116.3 (3)
C6'i—N2—C6121.8 (4)C4—C5—C6122.0 (3)
C6i—N2—C6121.8 (4)N2—C6—C7128.5 (5)
C6'i—N2—Zn1119.1 (2)N2—C6—C5112.8 (3)
C6i—N2—Zn1119.1 (2)C7—C6—C5118.7 (5)
C6—N2—Zn1119.1 (2)N3—C8—S1178.2 (3)
C8—N3—Zn1167.1 (3)
Zn1—N31.970 (3)
Zn1—N22.076 (4)
Zn1—N12.156 (3)
N1i—Zn1—N1152.16 (16)

Symmetry code: (i) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  {N,N'-Bis[1-(2-pyrid-yl)ethyl-idene]ethane-1,2-diamine-κN,N',N'',N'''}(thio-cyanato-κN)zinc(II) perchlorate.

Authors:  Fu-Ming Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-16

3.  (4-Chloro-2-{[(pyridin-2-ylmeth-yl)imino]-meth-yl}phenolato)iodido(methanol)zinc(II).

Authors:  Hong-Wei Huang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-09

4.  Dichlorido{2-morpholino-N-[1-(2-pyrid-yl)ethyl-idene]ethanamine-κN,N',N''}zinc(II).

Authors:  Nurul Azimah Ikmal Hisham; Nura Suleiman Gwaram; Hamid Khaledi; Hapipah Mohd Ali
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-11

5.  Bis{N-methyl-N'-[1-(pyridin-2-yl)ethyl-idene]ethane-1,2-diamine}-zinc bis-(perchlorate).

Authors:  Chen-Yi Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-06

6.  Aqua-{6,6'-dieth-oxy-2,2'-[ethane-1,2-diyl-bis(nitrilo-methanylyl-idene)]diphen-olato}zinc.

Authors:  Chen-Yi Wang; Xiang Wu; Juan-Juan Hu; Zhi-Ping Han
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-11
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.