Literature DB >> 22217906

Single-channel blind estimation of arterial input function and tissue impulse response in DCE-MRI.

Torfinn Taxt1, Radovan Jirík, Cecilie Brekke Rygh, Renate Grüner, Michal Bartos, Erling Andersen, Fitz-Roy Curry, Rolf K Reed.   

Abstract

Multipass dynamic MRI and pharmacokinetic modeling are used to estimate perfusion parameters of leaky capillaries. Curve fitting and nonblind deconvolution are the established methods to derive the perfusion estimates from the observed arterial input function (AIF) and tissue tracer concentration function. These nonblind methods are sensitive to errors in the AIF, measured in some nearby artery or estimated by multichannel blind deconvolution. Here, a single-channel blind deconvolution algorithm is presented, which only uses a single tissue tracer concentration function to estimate the corresponding AIF and tissue impulse response function. That way, many errors affecting these functions are reduced. The validity of the algorithm is supported by simulations and tests on real data from mouse. The corresponding nonblind and multichannel methods are also presented.

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Year:  2011        PMID: 22217906     DOI: 10.1109/TBME.2011.2182195

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  11 in total

Review 1.  A physiological perspective on the use of imaging to assess the in vivo delivery of therapeutics.

Authors:  Shengping Qin; Brett Z Fite; M Karen J Gagnon; Jai W Seo; Fitz-Roy Curry; Frits Thorsen; Katherine W Ferrara
Journal:  Ann Biomed Eng       Date:  2013-09-10       Impact factor: 3.934

2.  Image-based assessment of microvascular function and structure in collagen XV- and XVIII-deficient mice.

Authors:  C B Rygh; G Løkka; R Heljasvaara; T Taxt; T Pavlin; R Sormunen; T Pihlajaniemi; F R Curry; O Tenstad; R K Reed
Journal:  J Physiol       Date:  2013-11-11       Impact factor: 5.182

3.  Dynamic contrast-enhanced MRI in endometrial carcinoma identifies patients at increased risk of recurrence.

Authors:  Ingfrid S Haldorsen; Renate Grüner; Jenny A Husby; Inger J Magnussen; Henrica M J Werner; Oyvind O Salvesen; Line Bjørge; Ingunn Stefansson; Lars A Akslen; Jone Trovik; Torfinn Taxt; Helga B Salvesen
Journal:  Eur Radiol       Date:  2013-06-04       Impact factor: 5.315

4.  EGFRvIII mutations can emerge as late and heterogenous events in glioblastoma development and promote angiogenesis through Src activation.

Authors:  Eskil Eskilsson; Gro V Rosland; Krishna M Talasila; Stian Knappskog; Olivier Keunen; Andrea Sottoriva; Sarah Foerster; Gergely Solecki; Torfinn Taxt; Radovan Jirik; Sabrina Fritah; Patrick N Harter; Kristjan Välk; Jubayer Al Hossain; Justin V Joseph; Roza Jahedi; Halala S Saed; Sara G Piccirillo; Inma Spiteri; Lina Leiss; Philipp Euskirchen; Grazia Graziani; Thomas Daubon; Morten Lund-Johansen; Per Øyvind Enger; Frank Winkler; Christoph A Ritter; Simone P Niclou; Colin Watts; Rolf Bjerkvig; Hrvoje Miletic
Journal:  Neuro Oncol       Date:  2016-06-10       Impact factor: 12.300

5.  Increased microvascular proliferation is negatively correlated to tumour blood flow and is associated with unfavourable outcome in endometrial carcinomas.

Authors:  I S Haldorsen; I Stefansson; R Grüner; J A Husby; I J Magnussen; H M J Werner; Ø O Salvesen; L Bjørge; J Trovik; T Taxt; L A Akslen; H B Salvesen
Journal:  Br J Cancer       Date:  2013-10-31       Impact factor: 7.640

6.  Estimation of Response Functions Based on Variational Bayes Algorithm in Dynamic Images Sequences.

Authors:  Bowei Shan
Journal:  Biomed Res Int       Date:  2016-08-18       Impact factor: 3.411

7.  Lack of functional normalisation of tumour vessels following anti-angiogenic therapy in glioblastoma.

Authors:  Nina Obad; Heidi Espedal; Radovan Jirik; Per Oystein Sakariassen; Cecilie Brekke Rygh; Morten Lund-Johansen; Torfinn Taxt; Simone P Niclou; Rolf Bjerkvig; Olivier Keunen
Journal:  J Cereb Blood Flow Metab       Date:  2017-06-19       Impact factor: 6.200

8.  Patient-specific pharmacokinetic parameter estimation on dynamic contrast-enhanced MRI of prostate: Preliminary evaluation of a novel AIF-free estimation method.

Authors:  Shoshana B Ginsburg; Pekka Taimen; Harri Merisaari; Paula Vainio; Peter J Boström; Hannu J Aronen; Ivan Jambor; Anant Madabhushi
Journal:  J Magn Reson Imaging       Date:  2016-06-10       Impact factor: 5.119

9.  Increased microvascular permeability in mice lacking Epac1 (Rapgef3).

Authors:  R K Kopperud; C Brekke Rygh; T V Karlsen; C Krakstad; R Kleppe; E A Hoivik; M Bakke; O Tenstad; F Selheim; Å Lidén; L Madsen; T Pavlin; T Taxt; K Kristiansen; F-R E Curry; R K Reed; S O Døskeland
Journal:  Acta Physiol (Oxf)       Date:  2016-05-17       Impact factor: 6.311

10.  Epac1-/- mice have elevated baseline permeability and do not respond to histamine as measured with dynamic contrast-enhanced magnetic resonance imaging with contrast agents of different molecular weights.

Authors:  Fitz-Roy E Curry; Torfinn Taxt; Cecilie Brekke Rygh; Tina Pavlin; Ronja Bjønrstad; Stein Ove Døskeland; Rolf K Reed
Journal:  Acta Physiol (Oxf)       Date:  2018-11-02       Impact factor: 6.311

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