Literature DB >> 22209239

Advances in light-based imaging of three-dimensional cellular ultrastructure.

Pakorn Kanchanawong1, Clare M Waterman.   

Abstract

Visualization methods are key to gaining insights into cellular structure and function. Since diffraction has long confined optical microscopes to a resolution no better than hundreds of nanometers, the observation of ultrastructural features has traditionally been the domain of electron microscopes (EM). In the past decade, however, advances in super-resolution fluorescence microscopy have considerably expanded the capability of light-based imaging techniques. Advantages of fluorescent labeling such as high sensitivity, specificity, and multichannel capability, can now be exploited to dissect ultrastructural features of cells. With recent methods capable of imaging specific proteins with a resolution on the order of a few tens of nanometers in 3-dimensions, this has made it possible to elucidate the molecular organization of many complex cellular structures.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 22209239      PMCID: PMC3294081          DOI: 10.1016/j.ceb.2011.11.010

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  69 in total

1.  Optical sectioning deep inside live embryos by selective plane illumination microscopy.

Authors:  Jan Huisken; Jim Swoger; Filippo Del Bene; Joachim Wittbrodt; Ernst H K Stelzer
Journal:  Science       Date:  2004-08-13       Impact factor: 47.728

2.  Live-cell super-resolution imaging with trimethoprim conjugates.

Authors:  Richard Wombacher; Meike Heidbreder; Sebastian van de Linde; Michael P Sheetz; Mike Heilemann; Virginia W Cornish; Markus Sauer
Journal:  Nat Methods       Date:  2010-08-08       Impact factor: 28.547

3.  Subnanometre single-molecule localization, registration and distance measurements.

Authors:  Alexandros Pertsinidis; Yunxiang Zhang; Steven Chu
Journal:  Nature       Date:  2010-07-07       Impact factor: 49.962

4.  Interferometric fluorescent super-resolution microscopy resolves 3D cellular ultrastructure.

Authors:  Gleb Shtengel; James A Galbraith; Catherine G Galbraith; Jennifer Lippincott-Schwartz; Jennifer M Gillette; Suliana Manley; Rachid Sougrat; Clare M Waterman; Pakorn Kanchanawong; Michael W Davidson; Richard D Fetter; Harald F Hess
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-06       Impact factor: 11.205

5.  Fluorescence nanoscopy by ground-state depletion and single-molecule return.

Authors:  Jonas Fölling; Mariano Bossi; Hannes Bock; Rebecca Medda; Christian A Wurm; Birka Hein; Stefan Jakobs; Christian Eggeling; Stefan W Hell
Journal:  Nat Methods       Date:  2008-09-15       Impact factor: 28.547

6.  Reversible single-molecule photoswitching in the GFP-like fluorescent protein Dronpa.

Authors:  Satoshi Habuchi; Ryoko Ando; Peter Dedecker; Wendy Verheijen; Hideaki Mizuno; Atsushi Miyawaki; Johan Hofkens
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-22       Impact factor: 11.205

7.  In vivo structure of the E. coli FtsZ-ring revealed by photoactivated localization microscopy (PALM).

Authors:  Guo Fu; Tao Huang; Jackson Buss; Carla Coltharp; Zach Hensel; Jie Xiao
Journal:  PLoS One       Date:  2010-09-13       Impact factor: 3.240

8.  Cy3-Cy5 covalent heterodimers for single-molecule photoswitching.

Authors:  Nicholas R Conley; Julie S Biteen; W E Moerner
Journal:  J Phys Chem B       Date:  2008-08-28       Impact factor: 2.991

9.  Photoactivatable mCherry for high-resolution two-color fluorescence microscopy.

Authors:  Fedor V Subach; George H Patterson; Suliana Manley; Jennifer M Gillette; Jennifer Lippincott-Schwartz; Vladislav V Verkhusha
Journal:  Nat Methods       Date:  2009-01-25       Impact factor: 28.547

10.  Coupling between clathrin-dependent endocytic budding and F-BAR-dependent tubulation in a cell-free system.

Authors:  Min Wu; Bo Huang; Morven Graham; Andrea Raimondi; John E Heuser; Xiaowei Zhuang; Pietro De Camilli
Journal:  Nat Cell Biol       Date:  2010-08-22       Impact factor: 28.824

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  11 in total

1.  Monitoring actin cortex thickness in live cells.

Authors:  Andrew G Clark; Kai Dierkes; Ewa K Paluch
Journal:  Biophys J       Date:  2013-08-06       Impact factor: 4.033

Review 2.  Building quantitative, three-dimensional atlases of gene expression and morphology at cellular resolution.

Authors:  David W Knowles; Mark D Biggin
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2013-02-04       Impact factor: 5.814

3.  The talin dimer structure orientation is mechanically regulated.

Authors:  Javad Golji; Mohammad R K Mofrad
Journal:  Biophys J       Date:  2014-10-21       Impact factor: 4.033

4.  Three-dimensional Super Resolution Microscopy of F-actin Filaments by Interferometric PhotoActivated Localization Microscopy (iPALM).

Authors:  Yilin Wang; Pakorn Kanchanawong
Journal:  J Vis Exp       Date:  2016-12-01       Impact factor: 1.355

5.  Rapid computation of the amplitude and phase of tightly focused optical fields distorted by scattering particles.

Authors:  Janaka C Ranasinghesagara; Carole K Hayakawa; Mitchell A Davis; Andrew K Dunn; Eric O Potma; Vasan Venugopalan
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2014-07-01       Impact factor: 2.129

Review 6.  Visualizing cell structure and function with point-localization superresolution imaging.

Authors:  Prabuddha Sengupta; Schuyler Van Engelenburg; Jennifer Lippincott-Schwartz
Journal:  Dev Cell       Date:  2012-12-11       Impact factor: 12.270

7.  Moesin controls clathrin-mediated S1PR1 internalization in T cells.

Authors:  Akira Nomachi; Masanori Yoshinaga; Jaron Liu; Pakorn Kanchanawong; Kiyoshi Tohyama; Dean Thumkeo; Takeshi Watanabe; Shuh Narumiya; Takako Hirata
Journal:  PLoS One       Date:  2013-12-16       Impact factor: 3.240

8.  Extracting microtubule networks from superresolution single-molecule localization microscopy data.

Authors:  Zhen Zhang; Yukako Nishimura; Pakorn Kanchanawong
Journal:  Mol Biol Cell       Date:  2016-11-16       Impact factor: 4.138

9.  Three-Dimensional Super-Resolution in Eukaryotic Cells Using the Double-Helix Point Spread Function.

Authors:  Alexander R Carr; Aleks Ponjavic; Srinjan Basu; James McColl; Ana Mafalda Santos; Simon Davis; Ernest D Laue; David Klenerman; Steven F Lee
Journal:  Biophys J       Date:  2017-04-11       Impact factor: 4.033

Review 10.  Expression of recombinant glycoproteins in mammalian cells: towards an integrative approach to structural biology.

Authors:  A Radu Aricescu; Raymond J Owens
Journal:  Curr Opin Struct Biol       Date:  2013-04-25       Impact factor: 6.809

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