Literature DB >> 22205810

Evaluation of swabs, transport media, and specimen transport conditions for optimal detection of viruses by PCR.

Julian Druce1, Katherine Garcia, Thomas Tran, Georgina Papadakis, Chris Birch.   

Abstract

Depletion of swabs and viral transport medium during epidemics may prompt the use of unvalidated alternatives. Swabs collected and transported dry or in saline were compared to commercially available swab/medium combinations for PCR detection of influenza, enterovirus, herpes simplex virus, and adenovirus. Each was detected at an ambient temperature (22°C) and 4°C for 7 days. Detection of influenza on dry or saline swabs is important because of its capacity to cause outbreaks involving large numbers of cases.

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Year:  2012        PMID： 22205810      PMCID： PMC3295134          DOI： 10.1128/JCM.06551-11

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  9 in total

1.  Long-term persistence of human papillomavirus in environments.

Authors:  Dah-Ching Ding; Ying-Cheng Chang; Hwan-Wun Liu; Tang-Yuan Chu
Journal:  Gynecol Oncol       Date:  2011-01-03       Impact factor: 5.482

2.  Comparison between pernasal flocked swabs and nasopharyngeal aspirates for detection of common respiratory viruses in samples from children.

Authors:  Afaf Abu-Diab; Maysa Azzeh; Raed Ghneim; Riyad Ghneim; Madeleine Zoughbi; Sultan Turkuman; Nabeel Rishmawi; Abed-El-Razeq Issa; Issa Siriani; Rula Dauodi; Randa Kattan; Musa Y Hindiyeh
Journal:  J Clin Microbiol       Date:  2008-05-14       Impact factor: 5.948

3.  Effects of air temperature and relative humidity on coronavirus survival on surfaces.

Authors:  Lisa M Casanova; Soyoung Jeon; William A Rutala; David J Weber; Mark D Sobsey
Journal:  Appl Environ Microbiol       Date:  2010-03-12       Impact factor: 4.792

4.  Comparison of polyurethane foam to nylon flocked swabs for collection of secretions from the anterior nares in performance of a rapid influenza virus antigen test in a pediatric emergency department.

Authors:  Kimberly A Scansen; Bema K Bonsu; Erin Stoner; Kathy Mack; Douglas Salamon; Amy Leber; Mario J Marcon
Journal:  J Clin Microbiol       Date:  2010-01-06       Impact factor: 5.948

5.  Dry cotton or flocked respiratory swabs as a simple collection technique for the molecular detection of respiratory viruses using real-time NASBA.

Authors:  Catherine Moore; Sally Corden; Jaisi Sinha; Rachel Jones
Journal:  J Virol Methods       Date:  2008-09-11       Impact factor: 2.014

6.  Comparison of nasopharyngeal nylon flocked swabs with universal transport medium and rayon-bud swabs with a sponge reservoir of viral transport medium in the diagnosis of paediatric influenza.

Authors:  Susanna Esposito; Claudio Giuseppe Molteni; Cristina Daleno; Antonia Valzano; Laura Cesati; Laura Gualtieri; Claudia Tagliabue; Samantha Bosis; Nicola Principi
Journal:  J Med Microbiol       Date:  2010-01       Impact factor: 2.472

7.  Comparison of various transport media for viability maintenance of herpes simplex virus, respiratory syncytial virus, and adenovirus.

Authors:  C Jensen; F B Johnson
Journal:  Diagn Microbiol Infect Dis       Date:  1994-07       Impact factor: 2.803

8.  Survival of calicivirus in foods and on surfaces: experiments with feline calicivirus as a surrogate for norovirus.

Authors:  K Mattison; K Karthikeyan; M Abebe; N Malik; S A Sattar; J M Farber; S Bidawid
Journal:  J Food Prot       Date:  2007-02       Impact factor: 2.077

9.  Reality check of laboratory service effectiveness during pandemic (H1N1) 2009, Victoria, Australia.

Authors:  Michael Catton; Julian Druce; Goergina Papadakis; Thomas Tran; Christopher Birch
Journal:  Emerg Infect Dis       Date:  2011-06       Impact factor: 6.883
  9 in total
  29 in total

1.  Inhibition monitoring in veterinary molecular testing.

Authors:  Lifang Yan; Kathy L Toohey-Kurth; Beate M Crossley; Jianfa Bai; Amy L Glaser; Rebecca L Tallmadge; Laura B Goodman
Journal:  J Vet Diagn Invest       Date:  2019-11-18       Impact factor: 1.279

2.  Detection of influenza by real time RT-PCR is not affected by delays in respiratory specimen processing.

Authors:  Ryan Dare; Yuwei Zhu; John V Williams; Marie Griffin; H Keipp Talbot
Journal:  J Med Virol       Date:  2016-04-26       Impact factor: 2.327

3.  Prevalence and risk factors of Avian Influenza Viruses among household ducks in Chattogram, Bangladesh.

Authors:  Md Ashiqur Rahman; Joseph P Belgrad; Md Abu Sayeed; Md Sadeque Abdullah; Shanta Barua; Nurun Nahar Chisty; Md Abu Shoieb Mohsin; Mohammad Foysal; Mohammad Enayet Hossain; Ariful Islam; Holy Akwar; Md Ahasanul Hoque
Journal:  Vet Res Commun       Date:  2022-01-13       Impact factor: 2.459

Review 4.  Review of Current COVID-19 Diagnostics and Opportunities for Further Development.

Authors:  Yan Mardian; Herman Kosasih; Muhammad Karyana; Aaron Neal; Chuen-Yen Lau
Journal:  Front Med (Lausanne)       Date:  2021-05-07

5.  Fast Detection of SARS-CoV-2 RNA Directly from Respiratory Samples Using a Loop-Mediated Isothermal Amplification (LAMP) Test.

Authors:  Olympia E Anastasiou; Caroline Holtkamp; Miriam Schäfer; Frieda Schön; Anna Maria Eis-Hübinger; Andi Krumbholz
Journal:  Viruses       Date:  2021-04-29       Impact factor: 5.048

6.  Are Poultry or Wild Birds the Main Reservoirs for Avian Influenza in Bangladesh?

Authors:  Mohammad Mahmudul Hassan; Md Ahasanul Hoque; Nitish Chandra Debnath; Mat Yamage; Marcel Klaassen
Journal:  Ecohealth       Date:  2017-06-15       Impact factor: 3.184

7.  Self-Swabbing for Virological Confirmation of Influenza-Like Illness Among an Internet-Based Cohort in the UK During the 2014-2015 Flu Season: Pilot Study.

Authors:  Clare Wenham; Eleanor R Gray; Candice E Keane; Matthew Donati; Daniela Paolotti; Richard Pebody; Ellen Fragaszy; Rachel A McKendry; W John Edmunds
Journal:  J Med Internet Res       Date:  2018-03-01       Impact factor: 5.428

8.  Evaluation of Transport Media and Specimen Transport Conditions for the Detection of SARS-CoV-2 by Use of Real-Time Reverse Transcription-PCR.

Authors:  Amy A Rogers; Russell E Baumann; Gwynngelle A Borillo; Ron M Kagan; Hollis J Batterman; Marzena M Galdzicka; Elizabeth M Marlowe
Journal:  J Clin Microbiol       Date:  2020-07-23       Impact factor: 5.948

9.  Comparison of a new transport medium with universal transport medium at a tropical field site.

Authors:  Elizabeth P Schlaudecker; Joan P Heck; Elizabeth T MacIntyre; Ruben Martinez; Caitlin N Dodd; Monica M McNeal; Mary A Staat; Jeffery E Heck; Mark C Steinhoff
Journal:  Diagn Microbiol Infect Dis       Date:  2014-05-21       Impact factor: 2.803

10.  Comparison of Two Commercial Molecular Tests and a Laboratory-Developed Modification of the CDC 2019-nCoV Reverse Transcriptase PCR Assay for the Detection of SARS-CoV-2.

Authors:  Nicholas M Moore; Haiying Li; Debra Schejbal; Jennifer Lindsley; Mary K Hayden
Journal:  J Clin Microbiol       Date:  2020-07-23       Impact factor: 5.948
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