Literature DB >> 22205514

Zinc-finger nucleases: how to play two good hands.

Mark Isalan1.   

Abstract

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Year:  2011        PMID： 22205514     DOI： 10.1038/nmeth.1805

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  25 in total

1.  Targeting DNA double-strand breaks with TAL effector nucleases.

Authors:  Michelle Christian; Tomas Cermak; Erin L Doyle; Clarice Schmidt; Feng Zhang; Aaron Hummel; Adam J Bogdanove; Daniel F Voytas
Journal:  Genetics       Date:  2010-07-26       Impact factor: 4.562

2.  Transient cold shock enhances zinc-finger nuclease-mediated gene disruption.

Authors:  Yannick Doyon; Vivian M Choi; Danny F Xia; Thuy D Vo; Philip D Gregory; Michael C Holmes
Journal:  Nat Methods       Date:  2010-05-02       Impact factor: 28.547

3.  Sequence-specific recognition of double helical nucleic acids by proteins.

Authors:  N C Seeman; J M Rosenberg; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  1976-03       Impact factor: 11.205

4.  An unbiased genome-wide analysis of zinc-finger nuclease specificity.

Authors:  Richard Gabriel; Angelo Lombardo; Anne Arens; Jeffrey C Miller; Pietro Genovese; Christine Kaeppel; Ali Nowrouzi; Cynthia C Bartholomae; Jianbin Wang; Geoffrey Friedman; Michael C Holmes; Philip D Gregory; Hanno Glimm; Manfred Schmidt; Luigi Naldini; Christof von Kalle
Journal:  Nat Biotechnol       Date:  2011-08-07       Impact factor: 54.908

5.  Synergy between adjacent zinc fingers in sequence-specific DNA recognition.

Authors:  M Isalan; Y Choo; A Klug
Journal:  Proc Natl Acad Sci U S A       Date:  1997-05-27       Impact factor: 11.205

6.  Directed evolution of an enhanced and highly efficient FokI cleavage domain for zinc finger nucleases.

Authors:  Jing Guo; Thomas Gaj; Carlos F Barbas
Journal:  J Mol Biol       Date:  2010-05-04       Impact factor: 5.469

7.  Highly efficient endogenous human gene correction using designed zinc-finger nucleases.

Authors:  Fyodor D Urnov; Jeffrey C Miller; Ya-Li Lee; Christian M Beausejour; Jeremy M Rock; Sheldon Augustus; Andrew C Jamieson; Matthew H Porteus; Philip D Gregory; Michael C Holmes
Journal:  Nature       Date:  2005-04-03       Impact factor: 49.962

8.  Adding fingers to an engineered zinc finger nuclease can reduce activity.

Authors:  Yuka Shimizu; Cem Şöllü; Joshua F Meckler; Alice Adriaenssens; Artem Zykovich; Toni Cathomen; David J Segal
Journal:  Biochemistry       Date:  2011-05-11       Impact factor: 3.162

9.  A rapid, generally applicable method to engineer zinc fingers illustrated by targeting the HIV-1 promoter.

Authors:  M Isalan; A Klug; Y Choo
Journal:  Nat Biotechnol       Date:  2001-07       Impact factor: 54.908

10.  p53 Gene repair with zinc finger nucleases optimised by yeast 1-hybrid and validated by Solexa sequencing.

Authors:  Frank Herrmann; Mireia Garriga-Canut; Rebecca Baumstark; Emmanuel Fajardo-Sanchez; James Cotterell; André Minoche; Heinz Himmelbauer; Mark Isalan
Journal:  PLoS One       Date:  2011-06-09       Impact factor: 3.240
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  29 in total

1.  Prediction of DNA-binding specificity in zinc finger proteins.

Authors:  Sumedha Roy; Shayoni Dutta; Kanika Khanna; Shruti Singla; Durai Sundar
Journal:  J Biosci       Date:  2012-07       Impact factor: 1.826

2.  Balancing between affinity and speed in target DNA search by zinc-finger proteins via modulation of dynamic conformational ensemble.

Authors:  Levani Zandarashvili; Alexandre Esadze; Dana Vuzman; Catherine A Kemme; Yaakov Levy; Junji Iwahara
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-31       Impact factor: 11.205

3.  Speed-stability paradox in DNA-scanning by zinc-finger proteins.

Authors:  Junji Iwahara; Yaakov Levy
Journal:  Transcription       Date:  2013-02-14

4.  Minimum length of direct repeat sequences required for efficient homologous recombination induced by zinc finger nuclease in yeast.

Authors:  ChongHua Ren; Qiang Yan; ZhiYing Zhang
Journal:  Mol Biol Rep       Date:  2014-07-15       Impact factor: 2.316

Review 5.  Therapeutic genome editing: prospects and challenges.

Authors:  David Benjamin Turitz Cox; Randall Jeffrey Platt; Feng Zhang
Journal:  Nat Med       Date:  2015-02       Impact factor: 53.440

6.  Thermodynamic Additivity for Impacts of Base-Pair Substitutions on Association of the Egr-1 Zinc-Finger Protein with DNA.

Authors:  Abhijnan Chattopadhyay; Levani Zandarashvili; Ross H Luu; Junji Iwahara
Journal:  Biochemistry       Date:  2016-11-11       Impact factor: 3.162

Review 7.  Use of genome-editing tools to treat sickle cell disease.

Authors:  Ipek Tasan; Surbhi Jain; Huimin Zhao
Journal:  Hum Genet       Date:  2016-06-01       Impact factor: 4.132

Review 8.  Pluripotent stem cell applications for regenerative medicine.

Authors:  Mathew G Angelos; Dan S Kaufman
Journal:  Curr Opin Organ Transplant       Date:  2015-12       Impact factor: 2.640

Review 9.  Gene Editing and Human Pluripotent Stem Cells: Tools for Advancing Diabetes Disease Modeling and Beta-Cell Development.

Authors:  Katelyn Millette; Senta Georgia
Journal:  Curr Diab Rep       Date:  2017-10-05       Impact factor: 4.810

Review 10.  Genomic editing tools to model human diseases with isogenic pluripotent stem cells.

Authors:  Huen Suk Kim; Jeffrey M Bernitz; Dung-Fang Lee; Ihor R Lemischka
Journal:  Stem Cells Dev       Date:  2014-10-07       Impact factor: 3.272
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