Literature DB >> 22199892

O-Phenyl (tert-butyl-amido)(p-tolyl-amido)-phosphinate.

Mehrdad Pourayoubi, Arnold L Rheingold, Chao Chen, Fatemeh Karimi Ahmadabad, Atekeh Tarahhomi.   

Abstract

In the title mol-ecule, C(17)H(23)N(2)O(2)P, the P atom has a distorted tetra-hedral environment. The P-N bond to the tolyl-amido fragment is 1.642 (4) Å while that to the butyl-amido fragment is 1.629 (3) Å. The dihedral angle between the two benzene rings is 82.3 (2)°. In the crystal, adjacent mol-ecules are linked via weak N-H⋯(O)P and N-H⋯N hydrogen-bonding inter-actions into an extended chain parallel to the b axis. The three methyl groups of the tert-butyl-amido substituent are disordered over two sets of sites with equal occupancies. The crystal studied was found to be a non-merohedral twin with the minor twin component = 23.1 (1)%.

Entities:  

Year:  2011        PMID: 22199892      PMCID: PMC3239044          DOI: 10.1107/S1600536811048537

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to mixed-<span class="Chemical">amido phosphinates, see: Pourayoubi et al. (2011a ▶); Sabbaghi et al. (2011 ▶). For the sp 2 character of the nitro­gen atom of the P(=O)N unit and also for its low Lewis-base character in acting as a <span class="Chemical">hydrogen-bond acceptor, see: Toghraee et al. (2011 ▶); Pourayoubi et al. (2011b ▶,c ▶). For a description of the Cambridge Structure Database, see: Allen (2002 ▶).

Experimental

Crystal data

<span class="Chemical">C17H23N2O2P M = 318.34 Monoclinic, a = 11.412 (5) Å b = 9.519 (4) Å c = 15.768 (6) Å β = 104.332 (5)° V = 1659.5 (12) Å3 Z = 4 Mo Kα radiation μ = 0.18 mm−1 T = 100 K 0.20 × 0.18 × 0.15 mm

Data collection

Bruker APEX CCD diffractometer Absorption correction: multi-scan (TWINABS; Sheldrick, 2008a ▶) T min = 0.966, T max = 0.974 18075 measured reflections 3860 independent reflections 2497 reflections with I > 2σ(I) R int = 0.087

Refinement

R[F 2 > 2σ(F 2)] = 0.089 wR(F 2) = 0.203 S = 1.08 3860 reflections 235 parameters H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.42 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: CELL_NOW (Sheldrick, 2008a ▶) and SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008b ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008b ▶) and enCIFer (Allen et al., 2004 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811048537/wm2550sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811048537/wm2550Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H23N2O2PF(000) = 680
Mr = 318.34Dx = 1.274 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2700 reflections
a = 11.412 (5) Åθ = 2.5–27.3°
b = 9.519 (4) ŵ = 0.18 mm1
c = 15.768 (6) ÅT = 100 K
β = 104.332 (5)°Block, colourless
V = 1659.5 (12) Å30.20 × 0.18 × 0.15 mm
Z = 4
Bruker APEX CCD diffractometer18075 independent reflections
Radiation source: fine-focus sealed tube2497 reflections with I > 2σ(I)
graphiteRint = 0.087
φ and ω scansθmax = 28.3°, θmin = 2.0°
Absorption correction: multi-scan (TWINABS; Sheldrick, 2008a)h = −15→14
Tmin = 0.966, Tmax = 0.974k = 0→12
3860 measured reflectionsl = 0→20
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.089H-atom parameters constrained
wR(F2) = 0.203w = 1/[σ2(Fo2) + (0.032P)2 + 5.6384P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max < 0.001
3860 reflectionsΔρmax = 0.36 e Å3
235 parametersΔρmin = −0.42 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0051 (8)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
C1−0.3828 (4)0.3138 (7)0.1636 (3)0.0484 (14)
H1A−0.42410.32130.10140.073*
H1B−0.40380.39500.19510.073*
H1C−0.40830.22730.18760.073*
C2−0.2482 (4)0.3104 (6)0.1738 (3)0.0375 (11)
C3−0.1876 (4)0.1854 (5)0.1663 (2)0.0330 (10)
H3−0.23290.10080.15480.040*
C4−0.0631 (4)0.1802 (5)0.1750 (2)0.0293 (9)
H4−0.02490.09330.16880.035*
C50.0049 (3)0.3026 (5)0.1927 (2)0.0264 (9)
C6−0.0545 (3)0.4307 (5)0.1998 (2)0.0288 (9)
H6−0.00950.51550.21130.035*
C7−0.1785 (4)0.4320 (5)0.1901 (2)0.0338 (10)
H7−0.21740.51890.19480.041*
C80.2197 (4)0.1078 (5)0.0673 (3)0.0323 (10)
C90.1197 (4)0.1458 (5)0.0015 (3)0.0362 (11)
H90.04110.14700.01180.043*
C100.1373 (5)0.1821 (6)−0.0801 (3)0.0449 (12)
H100.07000.2084−0.12610.054*
C110.2522 (5)0.1802 (6)−0.0946 (3)0.0450 (12)
H110.26380.2068−0.15000.054*
C120.3495 (5)0.1395 (6)−0.0283 (3)0.0439 (12)
H120.42770.1364−0.03910.053*
C130.3357 (4)0.1030 (5)0.0541 (3)0.0369 (11)
H130.40310.07570.09980.044*
C140.2211 (4)0.1101 (5)0.3984 (2)0.0286 (9)
C150.3531 (8)0.0707 (13)0.4489 (6)0.041 (2)0.50
H15A0.3657−0.03030.44320.061*0.50
H15B0.36530.09480.51090.061*0.50
H15C0.41080.12310.42420.061*0.50
C160.1961 (10)0.2594 (11)0.4144 (6)0.038 (2)0.50
H16A0.24950.31990.39050.058*0.50
H16B0.21050.27570.47750.058*0.50
H16C0.11160.28110.38580.058*0.50
C170.1378 (10)0.0128 (12)0.4394 (6)0.043 (2)0.50
H17A0.05290.03860.41540.065*0.50
H17B0.15880.02470.50310.065*0.50
H17C0.1500−0.08550.42510.065*0.50
C15'0.3377 (8)0.1837 (13)0.4350 (5)0.041 (2)0.50
H15D0.40460.12560.42640.062*0.50
H15E0.34730.20020.49770.062*0.50
H15F0.33780.27390.40500.062*0.50
C16'0.1147 (9)0.2038 (12)0.4044 (6)0.042 (2)0.50
H16D0.12450.29660.38020.063*0.50
H16E0.11230.21350.46580.063*0.50
H16F0.03910.16130.37100.063*0.50
C17'0.2138 (9)−0.0251 (11)0.4441 (5)0.034 (2)0.50
H17D0.1421−0.07730.41260.051*0.50
H17E0.2080−0.00630.50400.051*0.50
H17F0.2865−0.08100.44570.051*0.50
N10.1321 (3)0.3055 (4)0.2034 (2)0.0272 (8)
H10.16190.38820.19510.033*
N20.2060 (3)0.0744 (4)0.3037 (2)0.0281 (8)
H20.1806−0.01090.28710.034*
O10.3536 (2)0.2436 (3)0.24577 (18)0.0325 (7)
O20.2020 (2)0.0677 (3)0.14980 (17)0.0304 (7)
P10.23229 (9)0.17878 (13)0.22865 (6)0.0262 (3)
U11U22U33U12U13U23
C10.028 (2)0.083 (4)0.036 (2)−0.002 (3)0.0118 (19)−0.001 (3)
C20.024 (2)0.070 (4)0.0189 (19)−0.006 (2)0.0061 (15)−0.004 (2)
C30.029 (2)0.048 (3)0.0203 (19)−0.008 (2)0.0044 (16)0.003 (2)
C40.028 (2)0.037 (2)0.0229 (19)−0.0024 (19)0.0063 (15)0.0036 (19)
C50.0230 (19)0.040 (2)0.0163 (17)0.0016 (18)0.0043 (14)0.0045 (17)
C60.024 (2)0.041 (3)0.0214 (19)−0.0008 (18)0.0050 (15)−0.0012 (18)
C70.029 (2)0.054 (3)0.0192 (19)0.008 (2)0.0083 (16)−0.003 (2)
C80.038 (2)0.038 (3)0.022 (2)−0.001 (2)0.0106 (17)−0.0050 (19)
C90.036 (2)0.048 (3)0.025 (2)0.000 (2)0.0081 (17)−0.004 (2)
C100.057 (3)0.053 (3)0.024 (2)0.010 (3)0.009 (2)−0.003 (2)
C110.063 (3)0.051 (3)0.027 (2)−0.002 (3)0.022 (2)−0.008 (2)
C120.048 (3)0.055 (3)0.035 (2)−0.007 (2)0.023 (2)−0.011 (2)
C130.034 (2)0.045 (3)0.033 (2)−0.004 (2)0.0097 (19)−0.008 (2)
C140.031 (2)0.037 (3)0.0199 (19)0.0019 (19)0.0097 (16)−0.0009 (18)
C150.038 (5)0.063 (7)0.019 (4)0.001 (5)0.002 (4)−0.002 (5)
C160.047 (6)0.049 (6)0.023 (4)0.000 (5)0.015 (4)0.006 (4)
C170.057 (7)0.052 (7)0.023 (5)−0.018 (6)0.016 (5)0.001 (4)
C15'0.040 (5)0.066 (7)0.019 (4)−0.019 (5)0.009 (4)−0.009 (5)
C16'0.041 (5)0.063 (7)0.024 (4)0.021 (5)0.012 (4)−0.004 (4)
C17'0.040 (5)0.046 (6)0.019 (4)0.002 (5)0.011 (4)0.004 (4)
N10.0212 (16)0.038 (2)0.0229 (16)−0.0022 (15)0.0067 (13)0.0015 (15)
N20.0318 (18)0.035 (2)0.0169 (16)−0.0020 (16)0.0045 (13)−0.0002 (14)
O10.0238 (14)0.0463 (19)0.0275 (15)−0.0002 (13)0.0067 (11)−0.0013 (14)
O20.0316 (15)0.0385 (18)0.0216 (14)−0.0021 (13)0.0079 (11)−0.0046 (13)
P10.0215 (5)0.0383 (6)0.0184 (5)0.0005 (5)0.0045 (4)−0.0014 (5)
C1—C21.506 (6)C14—C17'1.488 (10)
C1—H1A0.9800C14—N21.500 (5)
C1—H1B0.9800C14—C16'1.528 (10)
C1—H1C0.9800C14—C151.565 (10)
C2—C71.391 (7)C14—C171.576 (10)
C2—C31.396 (7)C15—H15A0.9800
C3—C41.394 (5)C15—H15B0.9800
C3—H30.9500C15—H15C0.9800
C4—C51.390 (6)C16—H16A0.9800
C4—H40.9500C16—H16B0.9800
C5—C61.413 (6)C16—H16C0.9800
C5—N11.419 (5)C17—H17A0.9800
C6—C71.386 (5)C17—H17B0.9800
C6—H60.9500C17—H17C0.9800
C7—H70.9500C15'—H15D0.9800
C8—C91.386 (6)C15'—H15E0.9800
C8—C131.391 (6)C15'—H15F0.9800
C8—O21.417 (5)C16'—H16D0.9800
C9—C101.395 (6)C16'—H16E0.9800
C9—H90.9500C16'—H16F0.9800
C10—C111.385 (7)C17'—H17D0.9800
C10—H100.9500C17'—H17E0.9800
C11—C121.379 (7)C17'—H17F0.9800
C11—H110.9500N1—P11.642 (4)
C12—C131.392 (6)N1—H10.8800
C12—H120.9500N2—P11.629 (3)
C13—H130.9500N2—H20.8800
C14—C161.483 (11)O1—P11.478 (3)
C14—C15'1.487 (10)O2—P11.603 (3)
C2—C1—H1A109.5N2—C14—C16'107.3 (4)
C2—C1—H1B109.5C16—C14—C15110.2 (7)
H1A—C1—H1B109.5C17'—C14—C1573.1 (6)
C2—C1—H1C109.5N2—C14—C15108.1 (4)
H1A—C1—H1C109.5C16'—C14—C15142.0 (6)
H1B—C1—H1C109.5C16—C14—C17109.4 (6)
C7—C2—C3116.9 (4)C15'—C14—C17133.6 (6)
C7—C2—C1121.5 (5)N2—C14—C17110.0 (5)
C3—C2—C1121.5 (5)C16'—C14—C1775.4 (6)
C4—C3—C2122.4 (4)C15—C14—C17104.6 (6)
C4—C3—H3118.8C14—C15—H15A109.5
C2—C3—H3118.8C14—C15—H15B109.5
C5—C4—C3119.6 (4)C14—C15—H15C109.5
C5—C4—H4120.2C14—C16—H16A109.5
C3—C4—H4120.2C14—C16—H16B109.5
C4—C5—C6119.0 (4)C14—C16—H16C109.5
C4—C5—N1122.9 (4)C14—C17—H17A109.5
C6—C5—N1118.1 (4)C14—C17—H17B109.5
C7—C6—C5119.8 (4)C14—C17—H17C109.5
C7—C6—H6120.1C14—C15'—H15D109.5
C5—C6—H6120.1C14—C15'—H15E109.5
C6—C7—C2122.3 (4)H15D—C15'—H15E109.5
C6—C7—H7118.9C14—C15'—H15F109.5
C2—C7—H7118.9H15D—C15'—H15F109.5
C9—C8—C13122.3 (4)H15E—C15'—H15F109.5
C9—C8—O2118.6 (4)C14—C16'—H16D109.5
C13—C8—O2119.0 (4)C14—C16'—H16E109.5
C8—C9—C10118.4 (4)H16D—C16'—H16E109.5
C8—C9—H9120.8C14—C16'—H16F109.5
C10—C9—H9120.8H16D—C16'—H16F109.5
C11—C10—C9120.5 (4)H16E—C16'—H16F109.5
C11—C10—H10119.8C14—C17'—H17D109.5
C9—C10—H10119.8C14—C17'—H17E109.5
C12—C11—C10119.7 (4)H17D—C17'—H17E109.5
C12—C11—H11120.1C14—C17'—H17F109.5
C10—C11—H11120.1H17D—C17'—H17F109.5
C11—C12—C13121.5 (5)H17E—C17'—H17F109.5
C11—C12—H12119.2C5—N1—P1130.2 (3)
C13—C12—H12119.2C5—N1—H1114.9
C8—C13—C12117.6 (4)P1—N1—H1114.9
C8—C13—H13121.2C14—N2—P1126.0 (3)
C12—C13—H13121.2C14—N2—H2117.0
C16—C14—C15'71.0 (7)P1—N2—H2117.0
C16—C14—C17'135.3 (6)C8—O2—P1118.8 (3)
C15'—C14—C17'111.8 (6)O1—P1—O2115.41 (16)
C16—C14—N2114.0 (5)O1—P1—N2117.03 (17)
C15'—C14—N2111.4 (4)O2—P1—N296.76 (17)
C17'—C14—N2106.2 (5)O1—P1—N1107.61 (19)
C15'—C14—C16'110.4 (7)O2—P1—N1107.01 (16)
C17'—C14—C16'109.5 (6)N2—P1—N1112.47 (17)
C7—C2—C3—C40.3 (6)C6—C5—N1—P1159.1 (3)
C1—C2—C3—C4179.6 (4)C16—C14—N2—P132.5 (6)
C2—C3—C4—C50.7 (6)C15'—C14—N2—P1−45.5 (7)
C3—C4—C5—C6−1.2 (5)C17'—C14—N2—P1−167.5 (5)
C3—C4—C5—N1179.3 (3)C16'—C14—N2—P175.5 (6)
C4—C5—C6—C70.7 (6)C15—C14—N2—P1−90.4 (6)
N1—C5—C6—C7−179.8 (3)C17—C14—N2—P1155.9 (6)
C5—C6—C7—C20.3 (6)C9—C8—O2—P1−101.8 (4)
C3—C2—C7—C6−0.8 (6)C13—C8—O2—P180.5 (5)
C1—C2—C7—C6179.9 (4)C8—O2—P1—O1−51.6 (3)
C13—C8—C9—C10−1.0 (7)C8—O2—P1—N2−175.9 (3)
O2—C8—C9—C10−178.6 (4)C8—O2—P1—N168.1 (3)
C8—C9—C10—C110.0 (8)C14—N2—P1—O154.8 (4)
C9—C10—C11—C121.2 (8)C14—N2—P1—O2177.8 (3)
C10—C11—C12—C13−1.4 (8)C14—N2—P1—N1−70.6 (4)
C9—C8—C13—C120.7 (7)C5—N1—P1—O1−170.6 (3)
O2—C8—C13—C12178.3 (4)C5—N1—P1—O264.8 (3)
C11—C12—C13—C80.5 (8)C5—N1—P1—N2−40.3 (4)
C4—C5—N1—P1−21.4 (5)
D—H···AD—HH···AD···AD—H···A
N1—H1···N2i0.882.323.175 (5)163.
N2—H2···O1ii0.882.403.275 (5)170.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯N2i0.882.323.175 (5)163
N2—H2⋯O1ii0.882.403.275 (5)170

Symmetry codes: (i) ; (ii) .

  6 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Different cyclic motifs in phosphoric triamides containing a C(O)NHP(O)(NH)2 skeleton and an R(2)(2)(10) graph set in three new compounds: a database analysis of hydrogen-bond strengths based on motifs.

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Journal:  Acta Crystallogr C       Date:  2011-06-29       Impact factor: 1.172

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Authors:  Mehrdad Pourayoubi; Monireh Negari; Marek Nečas
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5.  O-Phenyl (cyclo-hexyl-amido)(p-tolyl-amido)-phosphinate.

Authors:  Fahimeh Sabbaghi; Mehrdad Pourayoubi; Fatemeh Karimi Ahmadabad; Masood Parvez
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-25

6.  rac-Phenyl (benzylamido)(p-tolyl-amido)-phosphinate.

Authors:  Mehrdad Pourayoubi; Fatemeh Karimi Ahmadabad; Marek Nečas
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-31
  6 in total

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