Literature DB >> 22199886

cis-N,N-Bis(2-hy-droxy-benzyl-idene)cyclo-hexane-1,2-diamine.

Ping Fan1, Chunhua Ge, Xiangdong Zhang, Rui Zhang, Su Li.   

Abstract

In the title compound, C(20)H(22)N(2)O(2), the cyclo-hexane ring adopts a chair conformation and the two N atoms bonded to n class="Chemical">salicyl-idene groups are in cis positions. Both hy-droxy groups are involved in intra-molecular O-H⋯N hydrogen bonding and the two benzene rings form a dihedral angle of 60.5 (1)°.

Entities:  

Year:  2011        PMID: 22199886      PMCID: PMC3239038          DOI: 10.1107/S1600536811049038

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structure of trans-N,N′-bis­(salicyl­idene)-1,2-cyclo­hexa­nediamine, see: Cannadine et al. (1996 ▶); Liu et al. (1997 ▶), and for the crystal structures of its complexes, see: Khalaji et al. (2010 ▶); n class="Species">Man et al. (2008 ▶); Xu et al. (2009 ▶).

Experimental

Crystal data

C20H22N2O2 M = 322.40 Orthorhombic, a = 6.125 (3) Å b = 13.763 (6) Å c = 21.537 (9) Å V = 1815.4 (13) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 296 K 0.25 × 0.15 × 0.12 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.987, T max = 0.991 9439 measured reflections 4195 independent reflections 2178 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.115 S = 0.99 4195 reflections 219 parameters H-atom parameters constrained Δρmax = 0.09 e Å−3 Δρmin = −0.10 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97, PLATON (Spek, 2009 ▶) and WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811049038/cv5199sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811049038/cv5199Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811049038/cv5199Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H22N2O2F(000) = 688
Mr = 322.40Dx = 1.180 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 126 reflections
a = 6.125 (3) Åθ = 2.5–23.1°
b = 13.763 (6) ŵ = 0.08 mm1
c = 21.537 (9) ÅT = 296 K
V = 1815.4 (13) Å3Block, yellow
Z = 40.25 × 0.15 × 0.12 mm
Bruker SMART CCD area-detector diffractometer4195 independent reflections
Radiation source: fine-focus sealed tube2178 reflections with I > 2σ(I)
graphiteRint = 0.026
φ and ω scansθmax = 28.2°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −8→8
Tmin = 0.987, Tmax = 0.991k = −18→8
9439 measured reflectionsl = −27→28
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.115H-atom parameters constrained
S = 0.99w = 1/[σ2(Fo2) + (0.0487P)2] where P = (Fo2 + 2Fc2)/3
4195 reflections(Δ/σ)max < 0.001
219 parametersΔρmax = 0.09 e Å3
0 restraintsΔρmin = −0.10 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N2−0.0052 (3)1.09660 (12)0.07839 (9)0.0732 (5)
N1−0.0383 (3)0.92191 (11)0.14663 (8)0.0654 (4)
C14−0.0964 (4)1.13716 (14)0.03205 (11)0.0692 (6)
H14−0.23111.16720.03740.083*
O10.3379 (3)0.84294 (11)0.17057 (9)0.0955 (5)
H10.23970.88330.17220.143*
C150.0042 (3)1.13768 (13)−0.02904 (10)0.0622 (5)
C7−0.0724 (4)0.85231 (15)0.10808 (9)0.0642 (5)
H7−0.20200.85210.08560.077*
C13−0.1099 (4)1.09759 (15)0.13967 (10)0.0736 (6)
H13−0.22941.14490.13880.088*
C200.2131 (4)1.09706 (15)−0.03864 (11)0.0699 (6)
O20.3257 (3)1.05667 (15)0.00898 (8)0.1061 (6)
H20.25201.05930.04070.159*
C8−0.2060 (3)0.99701 (14)0.15462 (9)0.0670 (6)
H8−0.32640.98380.12580.080*
C16−0.1018 (4)1.17840 (16)−0.07974 (12)0.0803 (7)
H16−0.23791.2071−0.07420.096*
C50.0343 (4)0.69815 (16)0.05699 (9)0.0795 (7)
H5−0.09730.69840.03550.095*
C10.2831 (4)0.77194 (15)0.12906 (11)0.0720 (6)
C60.0818 (4)0.77415 (14)0.09806 (9)0.0635 (6)
C190.3026 (4)1.09673 (16)−0.09734 (12)0.0848 (7)
H190.43971.0695−0.10380.102*
C17−0.0095 (5)1.17723 (17)−0.13826 (12)0.0919 (8)
H17−0.08351.2042−0.17180.110*
C30.3740 (6)0.62313 (19)0.07855 (15)0.1027 (9)
H30.47210.57260.07190.123*
C20.4287 (4)0.69612 (18)0.11904 (13)0.0940 (8)
H2A0.56210.69490.13960.113*
C180.1903 (5)1.13633 (16)−0.14639 (13)0.0882 (7)
H180.25211.1351−0.18580.106*
C9−0.2941 (4)0.99545 (17)0.22072 (10)0.0861 (7)
H9A−0.41961.03820.22340.103*
H9B−0.34270.93020.23060.103*
C40.1800 (6)0.62283 (17)0.04797 (13)0.0955 (9)
H40.14540.57220.02110.115*
C120.0551 (5)1.13028 (19)0.18700 (12)0.1004 (8)
H12A0.10161.19600.17740.120*
H12B0.18221.08840.18500.120*
C10−0.1265 (5)1.0268 (2)0.26770 (11)0.1056 (9)
H10A−0.00670.98070.26800.127*
H10B−0.19181.02720.30870.127*
C11−0.0396 (6)1.1276 (2)0.25261 (13)0.1206 (10)
H11A0.07291.14510.28230.145*
H11B−0.15681.17470.25600.145*
U11U22U33U12U13U23
N20.0736 (12)0.0638 (10)0.0823 (12)0.0124 (10)0.0150 (11)0.0022 (10)
N10.0665 (11)0.0612 (10)0.0686 (10)0.0021 (9)−0.0040 (9)−0.0028 (9)
C140.0631 (14)0.0491 (11)0.0953 (16)0.0074 (10)0.0081 (14)−0.0095 (11)
O10.0795 (11)0.0822 (10)0.1249 (12)0.0047 (10)−0.0239 (11)−0.0169 (10)
C150.0558 (12)0.0503 (11)0.0807 (14)−0.0014 (10)0.0059 (12)−0.0102 (10)
C70.0657 (14)0.0729 (13)0.0540 (11)−0.0063 (12)0.0026 (11)0.0031 (11)
C130.0736 (15)0.0627 (12)0.0846 (15)0.0136 (11)0.0117 (14)−0.0044 (12)
C200.0635 (14)0.0615 (12)0.0848 (16)0.0066 (11)0.0056 (14)−0.0014 (12)
O20.0858 (12)0.1315 (14)0.1009 (12)0.0447 (11)0.0156 (11)0.0126 (12)
C80.0585 (13)0.0764 (13)0.0662 (13)0.0082 (12)−0.0002 (11)−0.0029 (11)
C160.0686 (15)0.0780 (14)0.0943 (17)0.0114 (12)−0.0031 (15)−0.0093 (14)
C50.1023 (19)0.0715 (14)0.0649 (13)−0.0134 (15)0.0107 (14)−0.0049 (11)
C10.0746 (16)0.0562 (12)0.0850 (16)−0.0052 (12)0.0086 (14)0.0037 (12)
C60.0739 (16)0.0567 (12)0.0600 (12)−0.0067 (12)0.0075 (12)0.0038 (10)
C190.0761 (16)0.0802 (15)0.0980 (18)0.0085 (14)0.0251 (16)−0.0053 (14)
C170.104 (2)0.0924 (17)0.0795 (17)0.0148 (16)−0.0074 (17)−0.0083 (14)
C30.116 (3)0.0641 (16)0.128 (2)0.0091 (17)0.046 (2)0.0023 (16)
C20.0843 (18)0.0730 (15)0.125 (2)0.0094 (15)0.0115 (17)0.0144 (16)
C180.104 (2)0.0741 (15)0.0870 (18)0.0034 (16)0.0185 (17)−0.0029 (13)
C90.0863 (17)0.0986 (16)0.0734 (15)0.0124 (15)0.0108 (14)0.0039 (13)
C40.133 (3)0.0620 (15)0.0916 (19)−0.0111 (18)0.037 (2)−0.0087 (13)
C120.101 (2)0.0944 (18)0.1055 (19)−0.0143 (16)0.0050 (17)−0.0323 (14)
C100.115 (2)0.133 (2)0.0689 (15)0.028 (2)−0.0044 (17)−0.0073 (16)
C110.122 (2)0.145 (3)0.0947 (19)−0.005 (2)−0.0084 (19)−0.0495 (19)
N2—C141.273 (3)C5—H50.9300
N2—C131.467 (3)C1—C21.390 (3)
N1—C71.285 (2)C1—C61.402 (3)
N1—C81.467 (2)C19—C181.373 (3)
C14—C151.453 (3)C19—H190.9300
C14—H140.9300C17—C181.359 (4)
O1—C11.366 (2)C17—H170.9300
O1—H10.8200C3—C41.358 (4)
C15—C161.389 (3)C3—C21.372 (4)
C15—C201.411 (3)C3—H30.9300
C7—C61.448 (3)C2—H2A0.9300
C7—H70.9300C18—H180.9300
C13—C121.504 (3)C9—C101.504 (4)
C13—C81.538 (3)C9—H9A0.9700
C13—H130.9800C9—H9B0.9700
C20—O21.355 (2)C4—H40.9300
C20—C191.378 (3)C12—C111.528 (4)
O2—H20.8200C12—H12A0.9700
C8—C91.523 (3)C12—H12B0.9700
C8—H80.9800C10—C111.522 (4)
C16—C171.382 (3)C10—H10A0.9700
C16—H160.9300C10—H10B0.9700
C5—C41.381 (4)C11—H11A0.9700
C5—C61.400 (3)C11—H11B0.9700
C14—N2—C13120.62 (18)C18—C19—H19119.8
C7—N1—C8119.17 (18)C20—C19—H19119.8
N2—C14—C15121.72 (19)C18—C17—C16119.4 (3)
N2—C14—H14119.1C18—C17—H17120.3
C15—C14—H14119.1C16—C17—H17120.3
C1—O1—H1109.5C4—C3—C2121.6 (3)
C16—C15—C20118.0 (2)C4—C3—H3119.2
C16—C15—C14121.0 (2)C2—C3—H3119.2
C20—C15—C14121.0 (2)C3—C2—C1119.5 (3)
N1—C7—C6123.0 (2)C3—C2—H2A120.3
N1—C7—H7118.5C1—C2—H2A120.3
C6—C7—H7118.5C17—C18—C19121.1 (2)
N2—C13—C12108.59 (19)C17—C18—H18119.5
N2—C13—C8110.31 (16)C19—C18—H18119.5
C12—C13—C8112.61 (19)C10—C9—C8112.5 (2)
N2—C13—H13108.4C10—C9—H9A109.1
C12—C13—H13108.4C8—C9—H9A109.1
C8—C13—H13108.4C10—C9—H9B109.1
O2—C20—C19119.4 (2)C8—C9—H9B109.1
O2—C20—C15120.8 (2)H9A—C9—H9B107.8
C19—C20—C15119.7 (2)C3—C4—C5119.6 (3)
C20—O2—H2109.5C3—C4—H4120.2
N1—C8—C9110.34 (17)C5—C4—H4120.2
N1—C8—C13109.95 (16)C13—C12—C11111.4 (2)
C9—C8—C13110.13 (17)C13—C12—H12A109.3
N1—C8—H8108.8C11—C12—H12A109.3
C9—C8—H8108.8C13—C12—H12B109.3
C13—C8—H8108.8C11—C12—H12B109.3
C17—C16—C15121.4 (2)H12A—C12—H12B108.0
C17—C16—H16119.3C9—C10—C11110.9 (2)
C15—C16—H16119.3C9—C10—H10A109.5
C4—C5—C6121.0 (3)C11—C10—H10A109.5
C4—C5—H5119.5C9—C10—H10B109.5
C6—C5—H5119.5C11—C10—H10B109.5
O1—C1—C2118.7 (2)H10A—C10—H10B108.1
O1—C1—C6120.8 (2)C10—C11—C12110.6 (2)
C2—C1—C6120.4 (2)C10—C11—H11A109.5
C5—C6—C1117.9 (2)C12—C11—H11A109.5
C5—C6—C7120.9 (2)C10—C11—H11B109.5
C1—C6—C7121.2 (2)C12—C11—H11B109.5
C18—C19—C20120.4 (2)H11A—C11—H11B108.1
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.821.872.599 (3)148
O2—H2···N20.821.842.577 (3)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.821.872.599 (3)148
O2—H2⋯N20.821.842.577 (3)148
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