| Literature DB >> 22199855 |
Hadi D Arman, Trupta Kaulgud, Edward R T Tiekink.
Abstract
The title 1:1 co-crystal, C(7)H(7)NO(2)·C(10)H(8)N(2)S(2), features a highly twisted 4-(pyridin-4-yldisulfan-yl)pyridine mol-ecule [dihedral angle between the pyridine rings = 89.06 (10)°]. A small twist is evident in the 2-amino-benzoic acid mol-ecule, with the C-C-C-O torsion angle being -7.7 (3)°. An N-H⋯O hydrogen bond occurs in the 2-amino-benzoic acid mol-ecule. In the crystal, mol-ecules are linked by O-H⋯N and N-H⋯N hydrogen bonds into a supra-molecular chain along the b axis. These are connected into layers by π-π inter-actions occurring between pyridine rings [centroid-centroid distance = 3.8489 (15) Å]. The layers are connected along the a axis by C-H⋯O contacts. The crystal studied was a racemic twin.Entities:
Year: 2011 PMID: 22199855 PMCID: PMC3239006 DOI: 10.1107/S1600536811048483
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C7H7NO2·C10H8N2S2 | |
| Monoclinic, | Mo |
| Hall symbol: C -2yc | Cell parameters from 3807 reflections |
| θ = 2.7–40.5° | |
| µ = 0.33 mm−1 | |
| β = 103.218 (4)° | Block, colourless |
| 0.30 × 0.27 × 0.15 mm | |
| Rigaku AFC12K/SATURN724 CCD diffractometer | 3115 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 27.5°, θmin = 2.7° |
| ω scans | |
| 3149 measured reflections | |
| 3149 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 3149 reflections | Δρmax = 0.25 e Å−3 |
| 227 parameters | Δρmin = −0.23 e Å−3 |
| 6 restraints | Absolute structure: nd |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 1.03842 (6) | 0.51910 (4) | 0.54403 (3) | 0.02643 (12) | |
| S2 | 0.84697 (6) | 0.53636 (3) | 0.44236 (3) | 0.02623 (12) | |
| O1 | 0.4176 (2) | 0.28720 (11) | 0.58052 (9) | 0.0301 (3) | |
| H1o | 0.425 (4) | 0.2527 (19) | 0.6269 (10) | 0.045* | |
| O2 | 0.45445 (19) | 0.42702 (12) | 0.66806 (9) | 0.0311 (3) | |
| N1 | 0.4410 (2) | 0.30644 (14) | 0.41463 (11) | 0.0323 (4) | |
| H1n | 0.428 (3) | 0.2877 (17) | 0.3594 (5) | 0.048* | |
| H2n | 0.418 (4) | 0.2615 (14) | 0.4525 (11) | 0.048* | |
| N2 | 0.9169 (2) | 0.27383 (14) | 0.73043 (12) | 0.0302 (4) | |
| N3 | 0.9212 (2) | 0.33036 (13) | 0.21812 (11) | 0.0271 (3) | |
| C1 | 0.4350 (2) | 0.41116 (14) | 0.43227 (12) | 0.0212 (4) | |
| C2 | 0.4369 (2) | 0.45314 (14) | 0.51627 (12) | 0.0213 (4) | |
| C3 | 0.4360 (2) | 0.56293 (16) | 0.52675 (13) | 0.0261 (4) | |
| H3 | 0.4382 | 0.5912 | 0.5831 | 0.031* | |
| C4 | 0.4322 (3) | 0.63068 (16) | 0.45784 (15) | 0.0291 (4) | |
| H4 | 0.4322 | 0.7046 | 0.4665 | 0.035* | |
| C5 | 0.4282 (3) | 0.58886 (16) | 0.37511 (14) | 0.0276 (4) | |
| H5 | 0.4246 | 0.6347 | 0.3269 | 0.033* | |
| C6 | 0.4294 (2) | 0.48188 (15) | 0.36270 (13) | 0.0241 (4) | |
| H6 | 0.4263 | 0.4551 | 0.3058 | 0.029* | |
| C7 | 0.4379 (2) | 0.38954 (15) | 0.59532 (12) | 0.0240 (4) | |
| C8 | 1.0466 (3) | 0.33503 (17) | 0.75021 (13) | 0.0309 (4) | |
| H8 | 1.1159 | 0.3276 | 0.8064 | 0.037* | |
| C9 | 1.0850 (3) | 0.40835 (17) | 0.69325 (13) | 0.0284 (4) | |
| H9 | 1.1792 | 0.4492 | 0.7096 | 0.034* | |
| C10 | 0.9828 (2) | 0.42076 (14) | 0.61162 (12) | 0.0221 (4) | |
| C11 | 0.8478 (2) | 0.35789 (15) | 0.58888 (13) | 0.0236 (4) | |
| H11 | 0.7764 | 0.3636 | 0.5332 | 0.028* | |
| C12 | 0.8218 (2) | 0.28615 (15) | 0.65130 (13) | 0.0269 (4) | |
| H12 | 0.7298 | 0.2430 | 0.6363 | 0.032* | |
| C13 | 0.8862 (2) | 0.45427 (14) | 0.35820 (12) | 0.0213 (4) | |
| C14 | 1.0171 (2) | 0.38876 (15) | 0.36659 (13) | 0.0246 (4) | |
| H14 | 1.0959 | 0.3849 | 0.4198 | 0.030* | |
| C15 | 1.0288 (3) | 0.32873 (16) | 0.29402 (14) | 0.0268 (4) | |
| H15 | 1.1186 | 0.2841 | 0.2989 | 0.032* | |
| C16 | 0.7979 (3) | 0.39530 (17) | 0.21060 (13) | 0.0293 (4) | |
| H16 | 0.7221 | 0.3981 | 0.1562 | 0.035* | |
| C17 | 0.7749 (3) | 0.45889 (16) | 0.27830 (13) | 0.0264 (4) | |
| H17 | 0.6857 | 0.5045 | 0.2705 | 0.032* |
| S1 | 0.0318 (3) | 0.0275 (2) | 0.0204 (2) | −0.0070 (2) | 0.00692 (19) | −0.00252 (17) |
| S2 | 0.0341 (3) | 0.02419 (19) | 0.0212 (2) | 0.00549 (19) | 0.00813 (19) | 0.00134 (17) |
| O1 | 0.0455 (9) | 0.0265 (7) | 0.0172 (6) | −0.0018 (6) | 0.0050 (6) | 0.0027 (5) |
| O2 | 0.0382 (9) | 0.0363 (8) | 0.0188 (7) | −0.0070 (7) | 0.0064 (6) | −0.0036 (6) |
| N1 | 0.0531 (12) | 0.0238 (8) | 0.0201 (8) | 0.0013 (8) | 0.0088 (8) | −0.0032 (6) |
| N2 | 0.0332 (10) | 0.0307 (9) | 0.0260 (9) | 0.0007 (8) | 0.0054 (7) | 0.0039 (7) |
| N3 | 0.0332 (9) | 0.0268 (8) | 0.0216 (8) | −0.0033 (7) | 0.0066 (7) | −0.0034 (7) |
| C1 | 0.0197 (8) | 0.0249 (8) | 0.0181 (8) | 0.0014 (7) | 0.0023 (7) | 0.0000 (7) |
| C2 | 0.0188 (8) | 0.0256 (8) | 0.0185 (9) | −0.0009 (7) | 0.0024 (7) | −0.0031 (7) |
| C3 | 0.0270 (9) | 0.0290 (9) | 0.0223 (9) | −0.0009 (8) | 0.0053 (8) | −0.0054 (8) |
| C4 | 0.0306 (11) | 0.0222 (9) | 0.0334 (11) | 0.0015 (8) | 0.0053 (9) | −0.0014 (8) |
| C5 | 0.0282 (10) | 0.0287 (9) | 0.0253 (10) | 0.0008 (8) | 0.0050 (8) | 0.0060 (8) |
| C6 | 0.0240 (10) | 0.0291 (9) | 0.0181 (9) | 0.0001 (7) | 0.0025 (8) | −0.0005 (7) |
| C7 | 0.0210 (9) | 0.0301 (9) | 0.0201 (9) | −0.0019 (7) | 0.0030 (7) | −0.0010 (7) |
| C8 | 0.0307 (10) | 0.0391 (11) | 0.0207 (10) | 0.0028 (9) | 0.0011 (8) | 0.0023 (8) |
| C9 | 0.0249 (9) | 0.0349 (10) | 0.0244 (10) | −0.0004 (8) | 0.0033 (8) | −0.0007 (8) |
| C10 | 0.0245 (9) | 0.0234 (9) | 0.0193 (8) | 0.0013 (7) | 0.0068 (7) | −0.0030 (7) |
| C11 | 0.0233 (9) | 0.0259 (8) | 0.0209 (9) | 0.0013 (7) | 0.0035 (7) | −0.0009 (7) |
| C12 | 0.0290 (10) | 0.0247 (9) | 0.0267 (10) | −0.0017 (7) | 0.0057 (8) | −0.0008 (7) |
| C13 | 0.0270 (10) | 0.0199 (8) | 0.0190 (9) | −0.0005 (7) | 0.0092 (7) | 0.0015 (6) |
| C14 | 0.0283 (10) | 0.0246 (8) | 0.0203 (9) | −0.0008 (7) | 0.0043 (8) | 0.0000 (7) |
| C15 | 0.0291 (10) | 0.0258 (9) | 0.0257 (10) | 0.0015 (8) | 0.0069 (8) | 0.0004 (7) |
| C16 | 0.0319 (10) | 0.0362 (10) | 0.0185 (9) | −0.0031 (8) | 0.0031 (8) | 0.0025 (8) |
| C17 | 0.0276 (10) | 0.0319 (9) | 0.0202 (9) | 0.0027 (8) | 0.0068 (8) | 0.0047 (7) |
| S1—C10 | 1.7762 (19) | C4—H4 | 0.9500 |
| S1—S2 | 2.0297 (8) | C5—C6 | 1.376 (3) |
| S2—C13 | 1.7761 (18) | C5—H5 | 0.9500 |
| O1—C7 | 1.328 (2) | C6—H6 | 0.9500 |
| O1—H1o | 0.8399 (10) | C8—C9 | 1.384 (3) |
| O2—C7 | 1.215 (2) | C8—H8 | 0.9500 |
| N1—C1 | 1.365 (2) | C9—C10 | 1.388 (3) |
| N1—H1n | 0.8800 (11) | C9—H9 | 0.9500 |
| N1—H2n | 0.8801 (10) | C10—C11 | 1.391 (3) |
| N2—C12 | 1.332 (3) | C11—C12 | 1.394 (3) |
| N2—C8 | 1.341 (3) | C11—H11 | 0.9500 |
| N3—C16 | 1.332 (3) | C12—H12 | 0.9500 |
| N3—C15 | 1.332 (3) | C13—C14 | 1.387 (3) |
| C1—C6 | 1.407 (3) | C13—C17 | 1.396 (3) |
| C1—C2 | 1.418 (2) | C14—C15 | 1.394 (3) |
| C2—C3 | 1.407 (3) | C14—H14 | 0.9500 |
| C2—C7 | 1.479 (2) | C15—H15 | 0.9500 |
| C3—C4 | 1.377 (3) | C16—C17 | 1.385 (3) |
| C3—H3 | 0.9500 | C16—H16 | 0.9500 |
| C4—C5 | 1.396 (3) | C17—H17 | 0.9500 |
| C10—S1—S2 | 105.22 (7) | N2—C8—H8 | 118.2 |
| C13—S2—S1 | 105.12 (7) | C9—C8—H8 | 118.2 |
| C7—O1—H1o | 112 (2) | C8—C9—C10 | 118.5 (2) |
| C1—N1—H1n | 117.5 (15) | C8—C9—H9 | 120.8 |
| C1—N1—H2n | 118.2 (15) | C10—C9—H9 | 120.8 |
| H1n—N1—H2n | 119.4 (18) | C9—C10—C11 | 119.33 (18) |
| C12—N2—C8 | 116.85 (18) | C9—C10—S1 | 115.41 (15) |
| C16—N3—C15 | 117.96 (17) | C11—C10—S1 | 125.26 (16) |
| N1—C1—C6 | 117.63 (17) | C10—C11—C12 | 117.17 (19) |
| N1—C1—C2 | 124.29 (18) | C10—C11—H11 | 121.4 |
| C6—C1—C2 | 118.07 (17) | C12—C11—H11 | 121.4 |
| C3—C2—C1 | 118.91 (17) | N2—C12—C11 | 124.59 (19) |
| C3—C2—C7 | 116.40 (16) | N2—C12—H12 | 117.7 |
| C1—C2—C7 | 124.69 (17) | C11—C12—H12 | 117.7 |
| C4—C3—C2 | 121.99 (18) | C14—C13—C17 | 119.32 (17) |
| C4—C3—H3 | 119.0 | C14—C13—S2 | 124.98 (16) |
| C2—C3—H3 | 119.0 | C17—C13—S2 | 115.70 (15) |
| C3—C4—C5 | 118.82 (18) | C13—C14—C15 | 117.50 (19) |
| C3—C4—H4 | 120.6 | C13—C14—H14 | 121.2 |
| C5—C4—H4 | 120.6 | C15—C14—H14 | 121.3 |
| C6—C5—C4 | 120.63 (18) | N3—C15—C14 | 123.7 (2) |
| C6—C5—H5 | 119.7 | N3—C15—H15 | 118.1 |
| C4—C5—H5 | 119.7 | C14—C15—H15 | 118.1 |
| C5—C6—C1 | 121.56 (18) | N3—C16—C17 | 123.1 (2) |
| C5—C6—H6 | 119.2 | N3—C16—H16 | 118.4 |
| C1—C6—H6 | 119.2 | C17—C16—H16 | 118.4 |
| O2—C7—O1 | 122.14 (18) | C16—C17—C13 | 118.30 (19) |
| O2—C7—C2 | 123.34 (18) | C16—C17—H17 | 120.8 |
| O1—C7—C2 | 114.52 (16) | C13—C17—H17 | 120.8 |
| N2—C8—C9 | 123.6 (2) | ||
| C10—S1—S2—C13 | −95.20 (9) | C8—C9—C10—C11 | −1.5 (3) |
| N1—C1—C2—C3 | 177.7 (2) | C8—C9—C10—S1 | 178.27 (16) |
| C6—C1—C2—C3 | −1.1 (3) | S2—S1—C10—C9 | −169.32 (13) |
| N1—C1—C2—C7 | −3.1 (3) | S2—S1—C10—C11 | 10.46 (18) |
| C6—C1—C2—C7 | 178.12 (18) | C9—C10—C11—C12 | 1.1 (3) |
| C1—C2—C3—C4 | 0.5 (3) | S1—C10—C11—C12 | −178.70 (14) |
| C7—C2—C3—C4 | −178.81 (18) | C8—N2—C12—C11 | −0.3 (3) |
| C2—C3—C4—C5 | 0.3 (3) | C10—C11—C12—N2 | −0.1 (3) |
| C3—C4—C5—C6 | −0.5 (3) | S1—S2—C13—C14 | 3.90 (18) |
| C4—C5—C6—C1 | −0.2 (3) | S1—S2—C13—C17 | −175.51 (13) |
| N1—C1—C6—C5 | −177.9 (2) | C17—C13—C14—C15 | −1.2 (3) |
| C2—C1—C6—C5 | 1.0 (3) | S2—C13—C14—C15 | 179.40 (15) |
| C3—C2—C7—O2 | −7.8 (3) | C16—N3—C15—C14 | 1.9 (3) |
| C1—C2—C7—O2 | 172.92 (19) | C13—C14—C15—N3 | −0.6 (3) |
| C3—C2—C7—O1 | 171.55 (19) | C15—N3—C16—C17 | −1.5 (3) |
| C1—C2—C7—O1 | −7.7 (3) | N3—C16—C17—C13 | −0.2 (3) |
| C12—N2—C8—C9 | −0.2 (3) | C14—C13—C17—C16 | 1.6 (3) |
| N2—C8—C9—C10 | 1.1 (3) | S2—C13—C17—C16 | −178.97 (15) |
| H··· | ||||
| N1—H2n···O1 | 0.88 (2) | 2.04 (2) | 2.667 (2) | 128.(2) |
| N1—H1n···N2i | 0.88 (1) | 2.15 (1) | 3.027 (3) | 173.(2) |
| O1—H1o···N3ii | 0.84 (2) | 1.79 (2) | 2.621 (2) | 173 (3) |
| C17—H17···O2iii | 0.95 | 2.42 | 3.251 (3) | 146 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H2 | 0.88 (2) | 2.04 (2) | 2.667 (2) | 128 (2) |
| N1—H1 | 0.88 (1) | 2.15 (1) | 3.027 (3) | 173 (2) |
| O1—H1 | 0.84 (2) | 1.79 (2) | 2.621 (2) | 173 (3) |
| C17—H17⋯O2iii | 0.95 | 2.42 | 3.251 (3) | 146 |
Symmetry codes: (i) ; (ii) ; (iii) .