Literature DB >> 22199855

2-Amino-benzoic acid-4-(pyridin-4-yl-disulfan-yl)pyridine (1/1).

Hadi D Arman, Trupta Kaulgud, Edward R T Tiekink.   

Abstract

The title 1:1 co-crystal, C(7)H(7)NO(2)·C(10)H(8)N(2)S(2), features a highly twisted 4-(pyridin-4-yldisulfan-yl)pyridine mol-ecule [dihedral angle between the pyridine rings = 89.06 (10)°]. A small twist is evident in the 2-amino-benzoic acid mol-ecule, with the C-C-C-O torsion angle being -7.7 (3)°. An N-H⋯O hydrogen bond occurs in the 2-amino-benzoic acid mol-ecule. In the crystal, mol-ecules are linked by O-H⋯N and N-H⋯N hydrogen bonds into a supra-molecular chain along the b axis. These are connected into layers by π-π inter-actions occurring between pyridine rings [centroid-centroid distance = 3.8489 (15) Å]. The layers are connected along the a axis by C-H⋯O contacts. The crystal studied was a racemic twin.

Entities:  

Year:  2011        PMID: 22199855      PMCID: PMC3239006          DOI: 10.1107/S1600536811048483

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related studies on co-crystal formation between carb­oxy­lic acids and pyridyl derivatives, see: Arman & Tiekink (2010 ▶); Wardell & Tiekink (2011 ▶); Arman et al. (2011 ▶).

Experimental

Crystal data

C7H7NO2·C10H8N2S2 M = 357.46 Monoclinic, a = 8.636 (2) Å b = 12.728 (3) Å c = 15.688 (4) Å β = 103.218 (4)° V = 1678.7 (7) Å3 Z = 4 Mo Kα radiation μ = 0.33 mm−1 T = 98 K 0.30 × 0.27 × 0.15 mm

Data collection

Rigaku AFC12/SATURN724 CCD diffractometer 3149 measured reflections 3149 independent reflections 3115 reflections with I > 2σ(I)

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.078 S = 1.03 3149 reflections 227 parameters 6 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.25 e Å−3 Δρmin = −0.23 e Å−3 Absolute structure: nd Flack parameter: ? Rogers parameter: ? Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPII (Johnson, 1976 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811048483/zs2162sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811048483/zs2162Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811048483/zs2162Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H7NO2·C10H8N2S2F(000) = 744
Mr = 357.46Dx = 1.414 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 3807 reflections
a = 8.636 (2) Åθ = 2.7–40.5°
b = 12.728 (3) ŵ = 0.33 mm1
c = 15.688 (4) ÅT = 98 K
β = 103.218 (4)°Block, colourless
V = 1678.7 (7) Å30.30 × 0.27 × 0.15 mm
Z = 4
Rigaku AFC12K/SATURN724 CCD diffractometer3115 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.000
graphiteθmax = 27.5°, θmin = 2.7°
ω scansh = −11→10
3149 measured reflectionsk = 0→16
3149 independent reflectionsl = −20→20
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.031H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.078w = 1/[σ2(Fo2) + (0.047P)2 + 0.5616P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max = 0.001
3149 reflectionsΔρmax = 0.25 e Å3
227 parametersΔρmin = −0.23 e Å3
6 restraintsAbsolute structure: nd
Primary atom site location: structure-invariant direct methods
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S11.03842 (6)0.51910 (4)0.54403 (3)0.02643 (12)
S20.84697 (6)0.53636 (3)0.44236 (3)0.02623 (12)
O10.4176 (2)0.28720 (11)0.58052 (9)0.0301 (3)
H1o0.425 (4)0.2527 (19)0.6269 (10)0.045*
O20.45445 (19)0.42702 (12)0.66806 (9)0.0311 (3)
N10.4410 (2)0.30644 (14)0.41463 (11)0.0323 (4)
H1n0.428 (3)0.2877 (17)0.3594 (5)0.048*
H2n0.418 (4)0.2615 (14)0.4525 (11)0.048*
N20.9169 (2)0.27383 (14)0.73043 (12)0.0302 (4)
N30.9212 (2)0.33036 (13)0.21812 (11)0.0271 (3)
C10.4350 (2)0.41116 (14)0.43227 (12)0.0212 (4)
C20.4369 (2)0.45314 (14)0.51627 (12)0.0213 (4)
C30.4360 (2)0.56293 (16)0.52675 (13)0.0261 (4)
H30.43820.59120.58310.031*
C40.4322 (3)0.63068 (16)0.45784 (15)0.0291 (4)
H40.43220.70460.46650.035*
C50.4282 (3)0.58886 (16)0.37511 (14)0.0276 (4)
H50.42460.63470.32690.033*
C60.4294 (2)0.48188 (15)0.36270 (13)0.0241 (4)
H60.42630.45510.30580.029*
C70.4379 (2)0.38954 (15)0.59532 (12)0.0240 (4)
C81.0466 (3)0.33503 (17)0.75021 (13)0.0309 (4)
H81.11590.32760.80640.037*
C91.0850 (3)0.40835 (17)0.69325 (13)0.0284 (4)
H91.17920.44920.70960.034*
C100.9828 (2)0.42076 (14)0.61162 (12)0.0221 (4)
C110.8478 (2)0.35789 (15)0.58888 (13)0.0236 (4)
H110.77640.36360.53320.028*
C120.8218 (2)0.28615 (15)0.65130 (13)0.0269 (4)
H120.72980.24300.63630.032*
C130.8862 (2)0.45427 (14)0.35820 (12)0.0213 (4)
C141.0171 (2)0.38876 (15)0.36659 (13)0.0246 (4)
H141.09590.38490.41980.030*
C151.0288 (3)0.32873 (16)0.29402 (14)0.0268 (4)
H151.11860.28410.29890.032*
C160.7979 (3)0.39530 (17)0.21060 (13)0.0293 (4)
H160.72210.39810.15620.035*
C170.7749 (3)0.45889 (16)0.27830 (13)0.0264 (4)
H170.68570.50450.27050.032*
U11U22U33U12U13U23
S10.0318 (3)0.0275 (2)0.0204 (2)−0.0070 (2)0.00692 (19)−0.00252 (17)
S20.0341 (3)0.02419 (19)0.0212 (2)0.00549 (19)0.00813 (19)0.00134 (17)
O10.0455 (9)0.0265 (7)0.0172 (6)−0.0018 (6)0.0050 (6)0.0027 (5)
O20.0382 (9)0.0363 (8)0.0188 (7)−0.0070 (7)0.0064 (6)−0.0036 (6)
N10.0531 (12)0.0238 (8)0.0201 (8)0.0013 (8)0.0088 (8)−0.0032 (6)
N20.0332 (10)0.0307 (9)0.0260 (9)0.0007 (8)0.0054 (7)0.0039 (7)
N30.0332 (9)0.0268 (8)0.0216 (8)−0.0033 (7)0.0066 (7)−0.0034 (7)
C10.0197 (8)0.0249 (8)0.0181 (8)0.0014 (7)0.0023 (7)0.0000 (7)
C20.0188 (8)0.0256 (8)0.0185 (9)−0.0009 (7)0.0024 (7)−0.0031 (7)
C30.0270 (9)0.0290 (9)0.0223 (9)−0.0009 (8)0.0053 (8)−0.0054 (8)
C40.0306 (11)0.0222 (9)0.0334 (11)0.0015 (8)0.0053 (9)−0.0014 (8)
C50.0282 (10)0.0287 (9)0.0253 (10)0.0008 (8)0.0050 (8)0.0060 (8)
C60.0240 (10)0.0291 (9)0.0181 (9)0.0001 (7)0.0025 (8)−0.0005 (7)
C70.0210 (9)0.0301 (9)0.0201 (9)−0.0019 (7)0.0030 (7)−0.0010 (7)
C80.0307 (10)0.0391 (11)0.0207 (10)0.0028 (9)0.0011 (8)0.0023 (8)
C90.0249 (9)0.0349 (10)0.0244 (10)−0.0004 (8)0.0033 (8)−0.0007 (8)
C100.0245 (9)0.0234 (9)0.0193 (8)0.0013 (7)0.0068 (7)−0.0030 (7)
C110.0233 (9)0.0259 (8)0.0209 (9)0.0013 (7)0.0035 (7)−0.0009 (7)
C120.0290 (10)0.0247 (9)0.0267 (10)−0.0017 (7)0.0057 (8)−0.0008 (7)
C130.0270 (10)0.0199 (8)0.0190 (9)−0.0005 (7)0.0092 (7)0.0015 (6)
C140.0283 (10)0.0246 (8)0.0203 (9)−0.0008 (7)0.0043 (8)0.0000 (7)
C150.0291 (10)0.0258 (9)0.0257 (10)0.0015 (8)0.0069 (8)0.0004 (7)
C160.0319 (10)0.0362 (10)0.0185 (9)−0.0031 (8)0.0031 (8)0.0025 (8)
C170.0276 (10)0.0319 (9)0.0202 (9)0.0027 (8)0.0068 (8)0.0047 (7)
S1—C101.7762 (19)C4—H40.9500
S1—S22.0297 (8)C5—C61.376 (3)
S2—C131.7761 (18)C5—H50.9500
O1—C71.328 (2)C6—H60.9500
O1—H1o0.8399 (10)C8—C91.384 (3)
O2—C71.215 (2)C8—H80.9500
N1—C11.365 (2)C9—C101.388 (3)
N1—H1n0.8800 (11)C9—H90.9500
N1—H2n0.8801 (10)C10—C111.391 (3)
N2—C121.332 (3)C11—C121.394 (3)
N2—C81.341 (3)C11—H110.9500
N3—C161.332 (3)C12—H120.9500
N3—C151.332 (3)C13—C141.387 (3)
C1—C61.407 (3)C13—C171.396 (3)
C1—C21.418 (2)C14—C151.394 (3)
C2—C31.407 (3)C14—H140.9500
C2—C71.479 (2)C15—H150.9500
C3—C41.377 (3)C16—C171.385 (3)
C3—H30.9500C16—H160.9500
C4—C51.396 (3)C17—H170.9500
C10—S1—S2105.22 (7)N2—C8—H8118.2
C13—S2—S1105.12 (7)C9—C8—H8118.2
C7—O1—H1o112 (2)C8—C9—C10118.5 (2)
C1—N1—H1n117.5 (15)C8—C9—H9120.8
C1—N1—H2n118.2 (15)C10—C9—H9120.8
H1n—N1—H2n119.4 (18)C9—C10—C11119.33 (18)
C12—N2—C8116.85 (18)C9—C10—S1115.41 (15)
C16—N3—C15117.96 (17)C11—C10—S1125.26 (16)
N1—C1—C6117.63 (17)C10—C11—C12117.17 (19)
N1—C1—C2124.29 (18)C10—C11—H11121.4
C6—C1—C2118.07 (17)C12—C11—H11121.4
C3—C2—C1118.91 (17)N2—C12—C11124.59 (19)
C3—C2—C7116.40 (16)N2—C12—H12117.7
C1—C2—C7124.69 (17)C11—C12—H12117.7
C4—C3—C2121.99 (18)C14—C13—C17119.32 (17)
C4—C3—H3119.0C14—C13—S2124.98 (16)
C2—C3—H3119.0C17—C13—S2115.70 (15)
C3—C4—C5118.82 (18)C13—C14—C15117.50 (19)
C3—C4—H4120.6C13—C14—H14121.2
C5—C4—H4120.6C15—C14—H14121.3
C6—C5—C4120.63 (18)N3—C15—C14123.7 (2)
C6—C5—H5119.7N3—C15—H15118.1
C4—C5—H5119.7C14—C15—H15118.1
C5—C6—C1121.56 (18)N3—C16—C17123.1 (2)
C5—C6—H6119.2N3—C16—H16118.4
C1—C6—H6119.2C17—C16—H16118.4
O2—C7—O1122.14 (18)C16—C17—C13118.30 (19)
O2—C7—C2123.34 (18)C16—C17—H17120.8
O1—C7—C2114.52 (16)C13—C17—H17120.8
N2—C8—C9123.6 (2)
C10—S1—S2—C13−95.20 (9)C8—C9—C10—C11−1.5 (3)
N1—C1—C2—C3177.7 (2)C8—C9—C10—S1178.27 (16)
C6—C1—C2—C3−1.1 (3)S2—S1—C10—C9−169.32 (13)
N1—C1—C2—C7−3.1 (3)S2—S1—C10—C1110.46 (18)
C6—C1—C2—C7178.12 (18)C9—C10—C11—C121.1 (3)
C1—C2—C3—C40.5 (3)S1—C10—C11—C12−178.70 (14)
C7—C2—C3—C4−178.81 (18)C8—N2—C12—C11−0.3 (3)
C2—C3—C4—C50.3 (3)C10—C11—C12—N2−0.1 (3)
C3—C4—C5—C6−0.5 (3)S1—S2—C13—C143.90 (18)
C4—C5—C6—C1−0.2 (3)S1—S2—C13—C17−175.51 (13)
N1—C1—C6—C5−177.9 (2)C17—C13—C14—C15−1.2 (3)
C2—C1—C6—C51.0 (3)S2—C13—C14—C15179.40 (15)
C3—C2—C7—O2−7.8 (3)C16—N3—C15—C141.9 (3)
C1—C2—C7—O2172.92 (19)C13—C14—C15—N3−0.6 (3)
C3—C2—C7—O1171.55 (19)C15—N3—C16—C17−1.5 (3)
C1—C2—C7—O1−7.7 (3)N3—C16—C17—C13−0.2 (3)
C12—N2—C8—C9−0.2 (3)C14—C13—C17—C161.6 (3)
N2—C8—C9—C101.1 (3)S2—C13—C17—C16−178.97 (15)
D—H···AD—HH···AD···AD—H···A
N1—H2n···O10.88 (2)2.04 (2)2.667 (2)128.(2)
N1—H1n···N2i0.88 (1)2.15 (1)3.027 (3)173.(2)
O1—H1o···N3ii0.84 (2)1.79 (2)2.621 (2)173 (3)
C17—H17···O2iii0.952.423.251 (3)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H2n⋯O10.88 (2)2.04 (2)2.667 (2)128 (2)
N1—H1n⋯N2i0.88 (1)2.15 (1)3.027 (3)173 (2)
O1—H1o⋯N3ii0.84 (2)1.79 (2)2.621 (2)173 (3)
C17—H17⋯O2iii0.952.423.251 (3)146

Symmetry codes: (i) ; (ii) ; (iii) .

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3.  4-Aza-1-azoniabicyclo-[2.2.2]octa-ne-2-amino-benzoate-2-amino-benzoic acid (1/1/1).

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