Literature DB >> 22195221

Using RxNorm for cross-institutional formulary data normalization within a distributed grid-computing environment.

Rob Wynden1, Nick Anderson, Marco Casale, Prakash Lakshminarayanan, Kent Anderson, Justin Prosser, Larry Errecart, Alice Livshits, Tim Thimman, Mark Weiner.   

Abstract

Within the CTSA (Clinical Translational Sciences Awards) program, academic medical centers are tasked with the storage of clinical formulary data within an Integrated Data Repository (IDR) and the subsequent exposure of that data over grid computing environments for hypothesis generation and cohort selection. Formulary data collected over long periods of time across multiple institutions requires normalization of terms before those data sets can be aggregated and compared. This paper sets forth a solution to the challenge of generating derived aggregated normalized views from large, distributed data sets of clinical formulary data intended for re-use within clinical translational research.

Mesh:

Year:  2011        PMID: 22195221      PMCID: PMC3243211     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  8 in total

1.  Comparing and evaluating terminology services application programming interfaces: RxNav, UMLSKS and LexBIG.

Authors:  Jyotishman Pathak; Lee Peters; Christopher G Chute; Olivier Bodenreider
Journal:  J Am Med Inform Assoc       Date:  2010 Nov-Dec       Impact factor: 4.497

2.  Using the RxNorm web services API for quality assurance purposes.

Authors:  Lee Peters; Olivier Bodenreider
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

3.  The Shared Health Research Information Network (SHRINE): a prototype federated query tool for clinical data repositories.

Authors:  Griffin M Weber; Shawn N Murphy; Andrew J McMurry; Douglas Macfadden; Daniel J Nigrin; Susanne Churchill; Isaac S Kohane
Journal:  J Am Med Inform Assoc       Date:  2009-06-30       Impact factor: 4.497

4.  Serving the enterprise and beyond with informatics for integrating biology and the bedside (i2b2).

Authors:  Shawn N Murphy; Griffin Weber; Michael Mendis; Vivian Gainer; Henry C Chueh; Susanne Churchill; Isaac Kohane
Journal:  J Am Med Inform Assoc       Date:  2010 Mar-Apr       Impact factor: 4.497

5.  A graph-based approach to auditing RxNorm.

Authors:  Olivier Bodenreider; Lee B Peters
Journal:  J Biomed Inform       Date:  2009-04-24       Impact factor: 6.317

6.  Implementation of a deidentified federated data network for population-based cohort discovery.

Authors:  Nicholas Anderson; Aaron Abend; Aaron Mandel; Estella Geraghty; Davera Gabriel; Rob Wynden; Michael Kamerick; Kent Anderson; Julie Rainwater; Peter Tarczy-Hornoch
Journal:  J Am Med Inform Assoc       Date:  2011-08-26       Impact factor: 4.497

7.  Ontology mapping and data discovery for the translational investigator.

Authors:  Rob Wynden; Mark G Weiner; Ida Sim; Davera Gabriel; Marco Casale; Simona Carini; Shannon Hastings; David Ervin; Samson Tu; John H Gennari; Nick Anderson; Ketty Mobed; Prakash Lakshminarayanan; Maggie Massary; Russ J Cucina
Journal:  Summit Transl Bioinform       Date:  2010-03-01

8.  BioPortal: ontologies and integrated data resources at the click of a mouse.

Authors:  Natalya F Noy; Nigam H Shah; Patricia L Whetzel; Benjamin Dai; Michael Dorf; Nicholas Griffith; Clement Jonquet; Daniel L Rubin; Margaret-Anne Storey; Christopher G Chute; Mark A Musen
Journal:  Nucleic Acids Res       Date:  2009-05-29       Impact factor: 16.971

  8 in total

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