Literature DB >> 22194412

Widespread genetic switches and toxicity resistance proteins for fluoride.

Jenny L Baker1, Narasimhan Sudarsan2,3, Zasha Weinberg2,3, Adam Roth2,3, Randy B Stockbridge4, Ronald R Breaker2,3,5.   

Abstract

Most riboswitches are metabolite-binding RNA structures located in bacterial messenger RNAs where they control gene expression. We have discovered a riboswitch class in many bacterial and archaeal species whose members are selectively triggered by fluoride but reject other small anions, including chloride. These fluoride riboswitches activate expression of genes that encode putative fluoride transporters, enzymes that are known to be inhibited by fluoride, and additional proteins of unknown function. Our findings indicate that most organisms are naturally exposed to toxic levels of fluoride and that many species use fluoride-sensing RNAs to control the expression of proteins that alleviate the deleterious effects of this anion.

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Year:  2011        PMID: 22194412      PMCID: PMC4140402          DOI: 10.1126/science.1215063

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  19 in total

1.  Anion binding to nucleic acids.

Authors:  Pascal Auffinger; Lukasz Bielecki; Eric Westhof
Journal:  Structure       Date:  2004-03       Impact factor: 5.006

2.  The action of fluoride in caries prevention. A review of current concepts.

Authors:  R S Levine
Journal:  Br Dent J       Date:  1976-01-06       Impact factor: 1.626

3.  Identification and evolution of dual-topology membrane proteins.

Authors:  Mikaela Rapp; Erik Granseth; Susanna Seppälä; Gunnar von Heijne
Journal:  Nat Struct Mol Biol       Date:  2006-01-22       Impact factor: 15.369

4.  In-line probing analysis of riboswitches.

Authors:  Elizabeth E Regulski; Ronald R Breaker
Journal:  Methods Mol Biol       Date:  2008

5.  Overproduction of three genes leads to camphor resistance and chromosome condensation in Escherichia coli.

Authors:  K H Hu; E Liu; K Dean; M Gingras; W DeGraff; N J Trun
Journal:  Genetics       Date:  1996-08       Impact factor: 4.562

6.  Identification of a novel determinant of glutathione affinity in dichloromethane dehalogenases/glutathione S-transferases.

Authors:  S Vuilleumier; H Sorribas; T Leisinger
Journal:  Biochem Biophys Res Commun       Date:  1997-09-18       Impact factor: 3.575

7.  Susceptibility of oral bacteria to various fluoride salts.

Authors:  M Maltz; C G Emilson
Journal:  J Dent Res       Date:  1982-06       Impact factor: 6.116

Review 8.  Biochemical effects of fluoride on oral bacteria.

Authors:  I R Hamilton
Journal:  J Dent Res       Date:  1990-02       Impact factor: 6.116

Review 9.  Bacterial resistances to toxic metal ions--a review.

Authors:  S Silver
Journal:  Gene       Date:  1996-11-07       Impact factor: 3.688

Review 10.  The CLC 'chloride channel' family: revelations from prokaryotes.

Authors:  Kimberly Matulef; Merritt Maduke
Journal:  Mol Membr Biol       Date:  2007 Sep-Dec       Impact factor: 2.857

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  148 in total

Review 1.  RNA Structural Differentiation: Opportunities with Pattern Recognition.

Authors:  Christopher S Eubanks; Amanda E Hargrove
Journal:  Biochemistry       Date:  2018-12-18       Impact factor: 3.162

2.  Bioinformatic analysis of riboswitch structures uncovers variant classes with altered ligand specificity.

Authors:  Zasha Weinberg; James W Nelson; Christina E Lünse; Madeline E Sherlock; Ronald R Breaker
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-06       Impact factor: 11.205

3.  Eukaryotic resistance to fluoride toxicity mediated by a widespread family of fluoride export proteins.

Authors:  Sanshu Li; Kathryn D Smith; Jared H Davis; Patricia B Gordon; Ronald R Breaker; Scott A Strobel
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-30       Impact factor: 11.205

4.  Two-sided block of a dual-topology F- channel.

Authors:  Daniel L Turman; Jacob T Nathanson; Randy B Stockbridge; Timothy O Street; Christopher Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-20       Impact factor: 11.205

Review 5.  In the beginning: a personal reminiscence on the origin and legacy of ClC-0, the 'Torpedo Cl(-) channel'.

Authors:  Christopher Miller
Journal:  J Physiol       Date:  2015-01-05       Impact factor: 5.182

6.  Mutation of external glutamate residue reveals a new intermediate transport state and anion binding site in a CLC Cl-/H+ antiporter.

Authors:  Kunwoong Park; Byoung-Cheol Lee; Hyun-Ho Lim
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-13       Impact factor: 11.205

7.  Structural introspection of a putative fluoride transporter in plants.

Authors:  Aditya Banerjee; Aryadeep Roychoudhury
Journal:  3 Biotech       Date:  2019-02-22       Impact factor: 2.406

8.  Structural Basis for Ligand Binding to the Guanidine-I Riboswitch.

Authors:  Caroline W Reiss; Yong Xiong; Scott A Strobel
Journal:  Structure       Date:  2016-12-22       Impact factor: 5.006

Review 9.  A topologically diverse family of fluoride channels.

Authors:  Christian B Macdonald; Randy B Stockbridge
Journal:  Curr Opin Struct Biol       Date:  2017-05-14       Impact factor: 6.809

10.  A Single Nucleotide Change in the Promoter mutp Enhances Fluoride Resistance of Streptococcus mutans.

Authors:  Ying Liao; Bernd W Brandt; Min Zhang; Jiyao Li; Wim Crielaard; Cor van Loveren; Dong Mei Deng
Journal:  Antimicrob Agents Chemother       Date:  2016-11-21       Impact factor: 5.191

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