Literature DB >> 28514705

A topologically diverse family of fluoride channels.

Christian B Macdonald1, Randy B Stockbridge2.   

Abstract

Dual-topology proteins are likely evolutionary antecedents to a common motif in membrane protein structures, the inverted repeat. A family of fluoride channels, the Flucs, which protect microorganisms, fungi, and plants against cytoplasmic fluoride accumulation, has representatives of all topologies along this evolutionary trajectory, including dual-topology homodimers, antiparallel heterodimers, and, in eukaryotes, fused two-domain proteins with an inverted repeat motif. Recent high-resolution crystal structures of dual-topology homodimers, coupled with extensive functional information about both the homodimers and two-domain Flucs, provide a case study of the co-evolution of fold and function.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28514705      PMCID: PMC5612848          DOI: 10.1016/j.sbi.2017.04.003

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  43 in total

1.  A study of the evolution of inverted-topology repeats from LeuT-fold transporters using AlignMe.

Authors:  Kamil Khafizov; René Staritzbichler; Marcus Stamm; Lucy R Forrest
Journal:  Biochemistry       Date:  2010-11-23       Impact factor: 3.162

2.  Pnu Transporters: Ain't They SWEET?

Authors:  Michael Jaehme; Albert Guskov; Dirk Jan Slotboom
Journal:  Trends Biochem Sci       Date:  2015-12-13       Impact factor: 13.807

3.  Identification and evolution of dual-topology membrane proteins.

Authors:  Mikaela Rapp; Erik Granseth; Susanna Seppälä; Gunnar von Heijne
Journal:  Nat Struct Mol Biol       Date:  2006-01-22       Impact factor: 15.369

4.  Eukaryotic resistance to fluoride toxicity mediated by a widespread family of fluoride export proteins.

Authors:  Sanshu Li; Kathryn D Smith; Jared H Davis; Patricia B Gordon; Ronald R Breaker; Scott A Strobel
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-30       Impact factor: 11.205

Review 5.  When two turn into one: evolution of membrane transporters from half modules.

Authors:  Rebecca Keller; Christine Ziegler; Dirk Schneider
Journal:  Biol Chem       Date:  2014-12       Impact factor: 3.915

6.  Yeast Fex1p Is a Constitutively Expressed Fluoride Channel with Functional Asymmetry of Its Two Homologous Domains.

Authors:  Kathryn D Smith; Patricia B Gordon; Alberto Rivetta; Kenneth E Allen; Tetyana Berbasova; Clifford Slayman; Scott A Strobel
Journal:  J Biol Chem       Date:  2015-06-08       Impact factor: 5.157

Review 7.  Structural Symmetry in Membrane Proteins.

Authors:  Lucy R Forrest
Journal:  Annu Rev Biophys       Date:  2015       Impact factor: 12.981

8.  Metal-ligand geometry relevant to proteins and in proteins: sodium and potassium.

Authors:  Marjorie M Harding
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-04-26

9.  Antiparallel EmrE exports drugs by exchanging between asymmetric structures.

Authors:  Emma A Morrison; Gregory T DeKoster; Supratik Dutta; Reza Vafabakhsh; Michael W Clarkson; Arjun Bahl; Dorothee Kern; Taekjip Ha; Katherine A Henzler-Wildman
Journal:  Nature       Date:  2011-12-18       Impact factor: 49.962

10.  Mechanism of single- and double-sided inhibition of dual topology fluoride channels by synthetic monobodies.

Authors:  Daniel L Turman; Randy B Stockbridge
Journal:  J Gen Physiol       Date:  2017-03-03       Impact factor: 4.086

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  7 in total

Review 1.  Still rocking in the structural era: a molecular overview of the Small Multidrug Resistance (SMR) transporter family.

Authors:  Olive E Burata; Trevor Justin Yeh; Christian B Macdonald; Randy B Stockbridge
Journal:  J Biol Chem       Date:  2022-09-10       Impact factor: 5.486

2.  Ion permeation, selectivity, and electronic polarization in fluoride channels.

Authors:  Zhi Yue; Zhi Wang; Gregory A Voth
Journal:  Biophys J       Date:  2022-02-11       Impact factor: 3.699

3.  An Interfacial Sodium Ion is an Essential Structural Feature of Fluc Family Fluoride Channels.

Authors:  Benjamin C McIlwain; Kamirah Martin; Elizabeth A Hayter; Randy B Stockbridge
Journal:  J Mol Biol       Date:  2020-01-14       Impact factor: 5.469

4.  Guanidinium export is the primal function of SMR family transporters.

Authors:  Ali A Kermani; Christian B Macdonald; Roja Gundepudi; Randy B Stockbridge
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-05       Impact factor: 11.205

Review 5.  Membrane Exporters of Fluoride Ion.

Authors:  Benjamin C McIlwain; Michal T Ruprecht; Randy B Stockbridge
Journal:  Annu Rev Biochem       Date:  2021-01-25       Impact factor: 27.258

6.  Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement.

Authors:  Rainer Borriss; Antoine Danchin; Colin R Harwood; Claudine Médigue; Eduardo P C Rocha; Agnieszka Sekowska; David Vallenet
Journal:  Microb Biotechnol       Date:  2018-01       Impact factor: 5.813

7.  Assigning crystallographic electron densities with free energy calculations-The case of the fluoride channel Fluc.

Authors:  Igor Ariz-Extreme; Jochen S Hub
Journal:  PLoS One       Date:  2018-05-17       Impact factor: 3.240

  7 in total

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