Literature DB >> 22180612

Sphingobacterium kyonggiense sp. nov., isolated from chloroethene-contaminated soil, and emended descriptions of Sphingobacterium daejeonense and Sphingobacterium mizutaii.

Hyun-Ah Choi1, Sang-Seob Lee1.   

Abstract

A Gram-reaction-negative, strictly aerobic, rod-shaped, non-motile strain, designated 2-1-2(T), was isolated from perchloroethylene/trichloroethene-contaminated soil in Suwon, South Korea. A polyphasic approach was used to study the taxonomic position of strain 2-1-2(T). Strain 2-1-2(T) showed highest 16S rRNA gene sequence similarities to Sphingobacterium daejeonense TR6-04(T) (97.9%) and Sphingobacterium mizutaii ATCC 33299(T) (97.1%); sequence similarities to other Sphingobacterium species were less than 93.0%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain 2-1-2(T) belonged to the clade formed by members of the genus Sphingobacterium in the family Sphingobacteriaceae. The G+C content of the genomic DNA was 36.6 mol%. Strain 2-1-2(T) showed the typical chemotaxonomic features of the genus Sphingobacterium, with the presence of a ceramide phosphorylethanolamine (CerPE-2) as the major ceramide, menaquinone 7 (MK-7) as the predominant respiratory quinone and iso-C(15:0), iso-C(17:0) 3-OH and summed feature 3 (comprising iso-C(15:0) 2-OH and/or C(16:1)ω7c) as the major fatty acids. On the basis of phylogenetic inference, fatty acid profile and other phenotypic properties, and DNA-DNA relatedness, strain 2-1-2(T) represents a novel species of the genus Sphingobacterium, for which the name Sphingobacterium kyonggiense sp. nov. is proposed; the type strain is 2-1-2(T) (=KEMC 2241-005(T)=JCM 16704(T)). Emended descriptions of Sphingobacterium daejeonense and Sphingobacterium mizutaii are also proposed.

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Year:  2011        PMID: 22180612     DOI: 10.1099/ijs.0.024737-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Psychrotolerant Sphingobacterium kitahiroshimense LT-2 Isolated from Dhundi Glacier, Himachal Pradesh: Origin Prediction and Future Application.

Authors:  Shivika Sharma; Subhankar Chatterjee
Journal:  Indian J Microbiol       Date:  2018-02-05       Impact factor: 2.461

2.  Characterization of a NaCl-tolerant β-N-acetylglucosaminidase from Sphingobacterium sp. HWLB1.

Authors:  Junpei Zhou; Zhifeng Song; Rui Zhang; Limei Ding; Qian Wu; Junjun Li; Xianghua Tang; Bo Xu; Junmei Ding; Nanyu Han; Zunxi Huang
Journal:  Extremophiles       Date:  2016-06-13       Impact factor: 2.395

3.  Whole-genome optical mapping and finished genome sequence of Sphingobacterium deserti sp. nov., a new species isolated from the Western Desert of China.

Authors:  Chao Teng; Zhengfu Zhou; István Molnár; Xinna Li; Ran Tang; Ming Chen; Lin Wang; Shiyou Su; Wei Zhang; Min Lin
Journal:  PLoS One       Date:  2015-04-01       Impact factor: 3.240

  3 in total

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