Literature DB >> 29651184

Psychrotolerant Sphingobacterium kitahiroshimense LT-2 Isolated from Dhundi Glacier, Himachal Pradesh: Origin Prediction and Future Application.

Shivika Sharma1,2, Subhankar Chatterjee1,2.   

Abstract

A psychrotolerant bacterium, isolated from Dhundi Glacier, Himachal Pradesh (India) was identified as Sphingobacterium kitahiroshimense LT-2 on the basis of biochemical, molecular and phylogenetic analysis. Sphingobacterium kitahiroshimense was first reported from Japan and was isolated from the city of Kitahiroshima, Hokkaido, Japan. In this report we have discussed about the origin of our strain and predicted that air masses and dust associated microbial cells transportation phenomena may be applicable for the origin of this species in this region. Enzymes and secondary metabolites secreted by the genus Sphingobacterium have enormous potentiality regarding their biotechnological application. Preliminary study of our strain based on metabolic profiling through HPLC showed many new metabolites were secreted by the bacterium when grown in presence of different sugar medium at 28 °C. As far as our knowledge this is the first report about Sphingobacterium species isolated from this region. This preliminary finding will help to draw an idea about the bacterial population in this Himalayan Glaciers (in HP) as well as biotechnological application of this strain can be explored further.

Entities:  

Keywords:  Cold active enzymes; Dust associated microbial cells transportation; Psychrophiles; Psychrotolerant bacteria; Secondary metabolites; Sphingobacterium

Year:  2018        PMID: 29651184      PMCID: PMC5891476          DOI: 10.1007/s12088-018-0712-6

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN: 0046-8991            Impact factor:   2.461


  16 in total

Review 1.  Bioactive microbial metabolites.

Authors:  János Bérdy
Journal:  J Antibiot (Tokyo)       Date:  2005-01       Impact factor: 2.649

2.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

3.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

4.  Microbiome of the upper troposphere: species composition and prevalence, effects of tropical storms, and atmospheric implications.

Authors:  Natasha DeLeon-Rodriguez; Terry L Lathem; Luis M Rodriguez-R; James M Barazesh; Bruce E Anderson; Andreas J Beyersdorf; Luke D Ziemba; Michael Bergin; Athanasios Nenes; Konstantinos T Konstantinidis
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-28       Impact factor: 11.205

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  Sphingobacterium kitahiroshimense sp. nov., isolated from soil.

Authors:  Hidetoshi Matsuyama; Hiromichi Katoh; Takahumi Ohkushi; Atsushi Satoh; Kazuyoshi Kawahara; Isao Yumoto
Journal:  Int J Syst Evol Microbiol       Date:  2008-07       Impact factor: 2.747

7.  Sphingobacterium siyangense sp. nov., isolated from farm soil.

Authors:  Rui Liu; Huan Liu; Chong-Xing Zhang; Shou-Yun Yang; Xiu-Hong Liu; Ke-Yun Zhang; Ren Lai
Journal:  Int J Syst Evol Microbiol       Date:  2008-06       Impact factor: 2.747

8.  Sphingobacterium griseoflavum sp. nov., isolated from the insect Teleogryllus occipitalis living in deserted cropland.

Authors:  Xiufeng Long; Bo Liu; Shuai Zhang; Yuqin Zhang; Zhigang Zeng; Yongqiang Tian
Journal:  Int J Syst Evol Microbiol       Date:  2016-02-12       Impact factor: 2.747

9.  Sphingobacterium kyonggiense sp. nov., isolated from chloroethene-contaminated soil, and emended descriptions of Sphingobacterium daejeonense and Sphingobacterium mizutaii.

Authors:  Hyun-Ah Choi; Sang-Seob Lee
Journal:  Int J Syst Evol Microbiol       Date:  2011-12-16       Impact factor: 2.747

10.  Recently deglaciated high-altitude soils of the Himalaya: diverse environments, heterogenous bacterial communities and long-range dust inputs from the upper troposphere.

Authors:  Blaz Stres; Woo Jun Sul; Bostjan Murovec; James M Tiedje
Journal:  PLoS One       Date:  2013-09-26       Impact factor: 3.240

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