Literature DB >> 22178420

A view of nuclear Polycomb bodies.

Vincenzo Pirrotta1, Hua-Bing Li.   

Abstract

Polycomb group (PcG) proteins are concentrated in nuclear foci called PcG bodies. Although some of these foci are due to the tendency of PcG binding sites in the genome to occur in linear clusters, distant PcG sites can contact one another and in some cases congregate in the same PcG body when they are repressed. Experiments using transgenes containing PcG binding sites reveal that co-localization depends on the presence of insulator elements rather than of Polycomb Response Elements (PREs) and that it can occur also when the transgenes are in the active state. A model is proposed according to which insulator proteins mediate shuttling of PcG target genes between PcG bodies when repressed to transcription factories when transcriptionally active.
Copyright © 2011 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 22178420      PMCID: PMC3329586          DOI: 10.1016/j.gde.2011.11.004

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  52 in total

1.  Functional interaction between the coactivator Drosophila CREB-binding protein and ASH1, a member of the trithorax group of chromatin modifiers.

Authors:  F Bantignies; R H Goodman; S M Smolik
Journal:  Mol Cell Biol       Date:  2000-12       Impact factor: 4.272

2.  Molecular interplay of the noncoding RNA ANRIL and methylated histone H3 lysine 27 by polycomb CBX7 in transcriptional silencing of INK4a.

Authors:  Kyoko L Yap; Side Li; Ana M Muñoz-Cabello; Selina Raguz; Lei Zeng; Shiraz Mujtaba; Jesús Gil; Martin J Walsh; Ming-Ming Zhou
Journal:  Mol Cell       Date:  2010-06-11       Impact factor: 17.970

3.  Genome-wide identification of polycomb-associated RNAs by RIP-seq.

Authors:  Jing Zhao; Toshiro K Ohsumi; Johnny T Kung; Yuya Ogawa; Daniel J Grau; Kavitha Sarma; Ji Joon Song; Robert E Kingston; Mark Borowsky; Jeannie T Lee
Journal:  Mol Cell       Date:  2010-12-22       Impact factor: 17.970

4.  Mediation of CTCF transcriptional insulation by DEAD-box RNA-binding protein p68 and steroid receptor RNA activator SRA.

Authors:  Hongjie Yao; Kevin Brick; Yvonne Evrard; Tiaojiang Xiao; R Daniel Camerini-Otero; Gary Felsenfeld
Journal:  Genes Dev       Date:  2010-10-21       Impact factor: 11.361

5.  Trithorax and dCBP acting in a complex to maintain expression of a homeotic gene.

Authors:  S Petruk; Y Sedkov; S Smith; S Tillib; V Kraevski; T Nakamura; E Canaani; C M Croce; A Mazo
Journal:  Science       Date:  2001-11-09       Impact factor: 47.728

6.  Polycomb group protein complexes exchange rapidly in living Drosophila.

Authors:  Gabriella Ficz; Rainer Heintzmann; Donna J Arndt-Jovin
Journal:  Development       Date:  2005-08-03       Impact factor: 6.868

7.  A reconfigured pattern of MLL occupancy within mitotic chromatin promotes rapid transcriptional reactivation following mitotic exit.

Authors:  Gerd A Blobel; Stephan Kadauke; Eric Wang; Alan W Lau; Johannes Zuber; Margaret M Chou; Christopher R Vakoc
Journal:  Mol Cell       Date:  2009-12-25       Impact factor: 17.970

8.  Polycomb-dependent regulatory contacts between distant Hox loci in Drosophila.

Authors:  Frédéric Bantignies; Virginie Roure; Itys Comet; Benjamin Leblanc; Bernd Schuettengruber; Jérôme Bonnet; Vanessa Tixier; André Mas; Giacomo Cavalli
Journal:  Cell       Date:  2011-01-21       Impact factor: 41.582

9.  The Drosophila trithorax protein is a coactivator required to prevent re-establishment of polycomb silencing.

Authors:  Sylvain Poux; Béatrice Horard; Christian J A Sigrist; Vincenzo Pirrotta
Journal:  Development       Date:  2002-05       Impact factor: 6.868

10.  Alternative epigenetic chromatin states of polycomb target genes.

Authors:  Yuri B Schwartz; Tatyana G Kahn; Per Stenberg; Katsuhito Ohno; Richard Bourgon; Vincenzo Pirrotta
Journal:  PLoS Genet       Date:  2010-01-08       Impact factor: 5.917

View more
  76 in total

1.  Nuclear condensates of the Polycomb protein chromobox 2 (CBX2) assemble through phase separation.

Authors:  Roubina Tatavosian; Samantha Kent; Kyle Brown; Tingting Yao; Huy Nguyen Duc; Thao Ngoc Huynh; Chao Yu Zhen; Brian Ma; Haobin Wang; Xiaojun Ren
Journal:  J Biol Chem       Date:  2018-12-04       Impact factor: 5.157

Review 2.  Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data.

Authors:  Job Dekker; Marc A Marti-Renom; Leonid A Mirny
Journal:  Nat Rev Genet       Date:  2013-05-09       Impact factor: 53.242

Review 3.  Specific genomic cues regulate Cajal body assembly.

Authors:  Iain A Sawyer; Gordon L Hager; Miroslav Dundr
Journal:  RNA Biol       Date:  2016-10-07       Impact factor: 4.652

4.  Ephemeral Protein Binding to DNA Shapes Stable Nuclear Bodies and Chromatin Domains.

Authors:  Chris A Brackley; Benno Liebchen; Davide Michieletto; Francois Mouvet; Peter R Cook; Davide Marenduzzo
Journal:  Biophys J       Date:  2017-03-28       Impact factor: 4.033

5.  Of giraffes' necks and the inheritance of chromatin states.

Authors:  Vincenzo Pirrotta
Journal:  Nat Genet       Date:  2017-05-26       Impact factor: 38.330

6.  Widespread rearrangement of 3D chromatin organization underlies polycomb-mediated stress-induced silencing.

Authors:  Li Li; Xiaowen Lyu; Chunhui Hou; Naomi Takenaka; Huy Q Nguyen; Chin-Tong Ong; Caelin Cubeñas-Potts; Ming Hu; Elissa P Lei; Giovanni Bosco; Zhaohui S Qin; Victor G Corces
Journal:  Mol Cell       Date:  2015-03-26       Impact factor: 17.970

Review 7.  Functional sub-division of the Drosophila genome via chromatin looping: the emerging importance of CP190.

Authors:  Sajad H Ahanger; Yogesh S Shouche; Rakesh K Mishra
Journal:  Nucleus       Date:  2013-01-18       Impact factor: 4.197

8.  Adaptive selection and coevolution at the proteins of the Polycomb repressive complexes in Drosophila.

Authors:  J M Calvo-Martín; P Librado; M Aguadé; M Papaceit; C Segarra
Journal:  Heredity (Edinb)       Date:  2015-10-21       Impact factor: 3.821

Review 9.  Chromosome Conformation Capture and Beyond: Toward an Integrative View of Chromosome Structure and Function.

Authors:  Rachel Patton McCord; Noam Kaplan; Luca Giorgetti
Journal:  Mol Cell       Date:  2020-01-27       Impact factor: 17.970

Review 10.  Nuclear organization and genome function.

Authors:  Kevin Van Bortle; Victor G Corces
Journal:  Annu Rev Cell Dev Biol       Date:  2012-08-17       Impact factor: 13.827

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.