Literature DB >> 22168674

Diffusion in periodic two-dimensional channels formed by overlapping circles: comparison of analytical and numerical results.

Inti Pineda1, Marco-Vinicio Vazquez, Alexander M Berezhkovskii, Leonardo Dagdug.   

Abstract

We study two-dimensional diffusion in a channel formed by periodic overlapping circles. Periodic variation of the channel width leads to the slowdown of diffusion along the channel axis. There are several approximate approaches, which allow one to analyze the slowdown. We use these approaches to derive five expressions for the effective diffusion coefficient of a point Brownian particle in the channel. To check the accuracy of the expressions we compare their predictions with the effective diffusion coefficient obtained from Brownian dynamics simulations.
© 2011 American Institute of Physics

Mesh:

Year:  2011        PMID: 22168674      PMCID: PMC3253745          DOI: 10.1063/1.3664179

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  9 in total

1.  Kinetic equations for diffusion in the presence of entropic barriers.

Authors:  D Reguera; J M Rubí
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2001-11-21

2.  Extended narrow escape problem: boundary homogenization-based analysis.

Authors:  A M Berezhkovskii; A V Barzykin
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2010-07-13

3.  Corrections to the Fick-Jacobs equation.

Authors:  P Kalinay; J K Percus
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-10-05

Review 4.  Diffusion in confined geometries.

Authors:  P Sekhar Burada; Peter Hänggi; Fabio Marchesoni; Gerhard Schmid; Peter Talkner
Journal:  Chemphyschem       Date:  2009-01-12       Impact factor: 3.102

5.  Diffusion in linear porous media with periodic entropy barriers: A tube formed by contacting spheres.

Authors:  Marco-Vinicio Vazquez; Alexander M Berezhkovskii; Leonardo Dagdug
Journal:  J Chem Phys       Date:  2008-07-28       Impact factor: 3.488

6.  Drift and diffusion in periodic potentials: upstream and downstream step times are distributed identically.

Authors:  Leonardo Dagdug; Alexander M Berezhkovskii
Journal:  J Chem Phys       Date:  2009-08-07       Impact factor: 3.488

7.  Entropic particle transport: higher-order corrections to the Fick-Jacobs diffusion equation.

Authors:  S Martens; G Schmid; L Schimansky-Geier; P Hänggi
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-05-31

8.  Time scale separation leads to position-dependent diffusion along a slow coordinate.

Authors:  Alexander Berezhkovskii; Attila Szabo
Journal:  J Chem Phys       Date:  2011-08-21       Impact factor: 3.488

9.  Narrow escape through a funnel and effective diffusion on a crowded membrane.

Authors:  D Holcman; N Hoze; Z Schuss
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-08-05
  9 in total
  1 in total

1.  Diffusion in the presence of cylindrical obstacles arranged in a square lattice analyzed with generalized Fick-Jacobs equation.

Authors:  Leonardo Dagdug; Marco-Vinicio Vazquez; Alexander M Berezhkovskii; Vladimir Yu Zitserman; Sergey M Bezrukov
Journal:  J Chem Phys       Date:  2012-05-28       Impact factor: 3.488

  1 in total

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