Literature DB >> 22167671

Expression and purification of Src-family kinases for solution NMR studies.

Andrea Piserchio1, David Cowburn, Ranajeet Ghose.   

Abstract

NMR analyses of the structure, dynamics, and interactions of the Src family kinases (SFKs) have been hindered by the limited ability to obtain sufficient amounts of properly folded, soluble protein from bacterial expression systems, to allow these studies to be performed in an economically viable manner. In this chapter, we detail our attempts to overcome these difficulties using the catalytic domain (SrcCD) of c-Src, the prototypical SFK, as an illustrative example. We describe in detail two general methods to express and purify SrcCD from Escherichia coli expression systems in both fully active wild-type and kinase-deficient mutant forms, allowing the efficient and cost-effective labeling by NMR-active isotopes for solution NMR studies.

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Year:  2012        PMID: 22167671      PMCID: PMC3305996          DOI: 10.1007/978-1-61779-480-3_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  64 in total

Review 1.  ERK and p38 MAPK-activated protein kinases: a family of protein kinases with diverse biological functions.

Authors:  Philippe P Roux; John Blenis
Journal:  Microbiol Mol Biol Rev       Date:  2004-06       Impact factor: 11.056

Review 2.  Structure and regulation of Src family kinases.

Authors:  Titus J Boggon; Michael J Eck
Journal:  Oncogene       Date:  2004-10-18       Impact factor: 9.867

3.  Src kinase activation: A switched electrostatic network.

Authors:  Elif Ozkirimli; Carol Beth Post
Journal:  Protein Sci       Date:  2006-04-05       Impact factor: 6.725

4.  Crystal structure of the Src family tyrosine kinase Hck.

Authors:  F Sicheri; I Moarefi; J Kuriyan
Journal:  Nature       Date:  1997-02-13       Impact factor: 49.962

5.  The Csk homologous kinase, Chk, binds tyrosine phosphorylated paxillin in human blastic T cells.

Authors:  S Grgurevich; A Mikhael; D W McVicar
Journal:  Biochem Biophys Res Commun       Date:  1999-03-24       Impact factor: 3.575

6.  High yield bacterial expression of active c-Abl and c-Src tyrosine kinases.

Authors:  Markus A Seeliger; Matthew Young; M Nidanie Henderson; Patricia Pellicena; David S King; Arnold M Falick; John Kuriyan
Journal:  Protein Sci       Date:  2005-10-31       Impact factor: 6.725

7.  Optimized bacterial expression and purification of the c-Src catalytic domain for solution NMR studies.

Authors:  Andrea Piserchio; Ranajeet Ghose; David Cowburn
Journal:  J Biomol NMR       Date:  2009-04-28       Impact factor: 2.835

Review 8.  The chemical biology of protein phosphorylation.

Authors:  Mary Katherine Tarrant; Philip A Cole
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

9.  Kinase requirements in human cells: I. Comparing kinase requirements across various cell types.

Authors:  Dorre A Grueneberg; Sebastien Degot; Joseph Pearlberg; Wenliang Li; Joan E Davies; Amy Baldwin; Wilson Endege; John Doench; Jacqueline Sawyer; Yanhui Hu; Frederick Boyce; Jun Xian; Karl Munger; Ed Harlow
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-23       Impact factor: 11.205

10.  Uniform and residue-specific 15N-labeling of proteins on a highly deuterated background.

Authors:  Jocelyne Fiaux; Eric B Bertelsen; Arthur L Horwich; Kurt Wüthrich
Journal:  J Biomol NMR       Date:  2004-07       Impact factor: 2.835

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  3 in total

1.  Assignment of backbone resonances in a eukaryotic protein kinase - ERK2 as a representative example.

Authors:  Andrea Piserchio; Kevin N Dalby; Ranajeet Ghose
Journal:  Methods Mol Biol       Date:  2012

2.  Conformation-selective inhibitors reveal differences in the activation and phosphate-binding loops of the tyrosine kinases Abl and Src.

Authors:  Sanjay B Hari; B Gayani K Perera; Pratistha Ranjitkar; Markus A Seeliger; Dustin J Maly
Journal:  ACS Chem Biol       Date:  2013-10-29       Impact factor: 5.100

3.  Minimally disruptive optical control of protein tyrosine phosphatase 1B.

Authors:  Akarawin Hongdusit; Peter H Zwart; Banumathi Sankaran; Jerome M Fox
Journal:  Nat Commun       Date:  2020-02-07       Impact factor: 14.919

  3 in total

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