Literature DB >> 22156437

Discovery of functional gene variants associated with human longevity: opportunities and challenges.

Cagdas Tazearslan1, Miook Cho, Yousin Suh.   

Abstract

Age is a major risk factor for many human diseases. Extremely long-lived individuals, such as centenarians, have managed to ward off age-related diseases and serve as human models to search for the genetic factors that influence longevity. The discovery of evolutionarily conserved pathways with major impact on life span in animal models has provided tantalizing opportunities to test the relevance of these pathways for human longevity. Here we specifically focus on the insulin/insulin-like growth factor-1 signaling as a prime candidate pathway. Coupled with the rapid advances in ultra high-throughput sequencing technologies, it is now feasible to comprehensively analyze all possible sequence variants in candidate genes segregating with a longevity phenotype and to investigate the functional consequences of the associated variants. A better understanding of the functional genes that affect healthy longevity in humans may lead to a rational basis for intervention strategies that can delay or prevent age-related diseases.

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Year:  2011        PMID: 22156437      PMCID: PMC3309874          DOI: 10.1093/gerona/glr200

Source DB:  PubMed          Journal:  J Gerontol A Biol Sci Med Sci        ISSN: 1079-5006            Impact factor:   6.053


  89 in total

1.  The International HapMap Project.

Authors: 
Journal:  Nature       Date:  2003-12-18       Impact factor: 49.962

2.  The Eukaryotic Promoter Database EPD: the impact of in silico primer extension.

Authors:  Christoph D Schmid; Viviane Praz; Mauro Delorenzi; Rouaïda Périer; Philipp Bucher
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

3.  SWISS-MODEL: An automated protein homology-modeling server.

Authors:  Torsten Schwede; Jürgen Kopp; Nicolas Guex; Manuel C Peitsch
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

4.  SIFT: Predicting amino acid changes that affect protein function.

Authors:  Pauline C Ng; Steven Henikoff
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

5.  Genes that act downstream of DAF-16 to influence the lifespan of Caenorhabditis elegans.

Authors:  Coleen T Murphy; Steven A McCarroll; Cornelia I Bargmann; Andrew Fraser; Ravi S Kamath; Julie Ahringer; Hao Li; Cynthia Kenyon
Journal:  Nature       Date:  2003-06-29       Impact factor: 49.962

6.  Polymorphic variants of insulin-like growth factor I (IGF-I) receptor and phosphoinositide 3-kinase genes affect IGF-I plasma levels and human longevity: cues for an evolutionarily conserved mechanism of life span control.

Authors:  Massimiliano Bonafè; Michelangela Barbieri; Francesca Marchegiani; Fabiola Olivieri; Emilia Ragno; Claudia Giampieri; Elena Mugianesi; Matteo Centurelli; Claudio Franceschi; Giuseppe Paolisso
Journal:  J Clin Endocrinol Metab       Date:  2003-07       Impact factor: 5.958

7.  Deletion, but not antagonism, of the mouse growth hormone receptor results in severely decreased body weights, insulin, and insulin-like growth factor I levels and increased life span.

Authors:  Karen T Coschigano; Amy N Holland; Markus E Riders; Edward O List; Allan Flyvbjerg; John J Kopchick
Journal:  Endocrinology       Date:  2003-09       Impact factor: 4.736

8.  Regulation of aging and age-related disease by DAF-16 and heat-shock factor.

Authors:  Ao-Lin Hsu; Coleen T Murphy; Cynthia Kenyon
Journal:  Science       Date:  2003-05-16       Impact factor: 47.728

9.  ESEfinder: A web resource to identify exonic splicing enhancers.

Authors:  Luca Cartegni; Jinhua Wang; Zhengwei Zhu; Michael Q Zhang; Adrian R Krainer
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

Review 10.  Insulin/IGF-I-signaling pathway: an evolutionarily conserved mechanism of longevity from yeast to humans.

Authors:  Michelangela Barbieri; Massimiliano Bonafè; Claudio Franceschi; Giuseppe Paolisso
Journal:  Am J Physiol Endocrinol Metab       Date:  2003-11       Impact factor: 4.310

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  15 in total

1.  Within- and between-species study of extreme longevity--comments, commonalities, and goals.

Authors:  R Michael Anson; Bradley Willcox; Steven Austad; Thomas Perls
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2012-03-14       Impact factor: 6.053

2.  Who are the Okinawans? Ancestry, genome diversity, and implications for the genetic study of human longevity from a geographically isolated population.

Authors:  Nasrine Bendjilali; Wen-Chi Hsueh; Qimei He; D Craig Willcox; Caroline M Nievergelt; Timothy A Donlon; Pui-Yan Kwok; Makoto Suzuki; Bradley J Willcox
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2014-01-20       Impact factor: 6.053

3.  Modulation of human longevity by SIRT3 single nucleotide polymorphisms in the prospective study "Treviso Longeva (TRELONG)".

Authors:  Diego Albani; Eleonora Ateri; Stefano Mazzuco; Alice Ghilardi; Serena Rodilossi; Gloria Biella; Fausta Ongaro; Piero Antuono; Paolo Boldrini; Enrico Di Giorgi; Andrea Frigato; Elisabetta Durante; Livio Caberlotto; Andrea Zanardo; Marinella Siculi; Maurizio Gallucci; Gianluigi Forloni
Journal:  Age (Dordr)       Date:  2013-07-10

4.  Aging-induced dysregulation of dicer1-dependent microRNA expression impairs angiogenic capacity of rat cerebromicrovascular endothelial cells.

Authors:  Zoltan Ungvari; Zsuzsanna Tucsek; Danuta Sosnowska; Peter Toth; Tripti Gautam; Andrej Podlutsky; Agnes Csiszar; Gyorgy Losonczy; M Noa Valcarcel-Ares; William E Sonntag; Anna Csiszar
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2012-12-13       Impact factor: 6.053

5.  A Genetic Network Associated With Stress Resistance, Longevity, and Cancer in Humans.

Authors:  Morgan E Levine; Eileen M Crimmins
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2015-09-09       Impact factor: 6.053

Review 6.  The search for longevity and healthy aging genes: insights from epidemiological studies and samples of long-lived individuals.

Authors:  Joanne M Murabito; Rong Yuan; Kathryn L Lunetta
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2012-04-12       Impact factor: 6.053

7.  Genetic analysis of TOR complex gene variation with human longevity: a nested case-control study of American men of Japanese ancestry.

Authors:  Brian J Morris; Timothy A Donlon; Qimei He; John S Grove; Kamal H Masaki; Ayako Elliott; D Craig Willcox; Richard Allsopp; Bradley J Willcox
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2014-03-03       Impact factor: 6.053

8.  Circulating factors induced by caloric restriction in the nonhuman primate Macaca mulatta activate angiogenic processes in endothelial cells.

Authors:  Anna Csiszar; Danuta Sosnowska; Zsuzsanna Tucsek; Tripti Gautam; Peter Toth; Gyorgy Losonczy; Ricki J Colman; Richard Weindruch; Rozalyn M Anderson; William E Sonntag; Zoltan Ungvari
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2012-08-17       Impact factor: 6.053

9.  Discovery of novel non-synonymous SNP variants in 988 candidate genes from 6 centenarians by target capture and next-generation sequencing.

Authors:  Jeehae Han; Seungjin Ryu; David M Moskowitz; Devorah Rothenberg; Daniel J Leahy; Gil Atzmon; Nir Barzilai; Yousin Suh
Journal:  Mech Ageing Dev       Date:  2013-02-01       Impact factor: 5.432

10.  FOXO3 and related transcription factors in development, aging, and exceptional longevity.

Authors:  Arnold J Kahn
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2014-04-18       Impact factor: 6.053

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