Literature DB >> 22154918

Plasma components affect accuracy of circulating cancer-related microRNA quantitation.

Dong-Ja Kim1, Sarah Linnstaedt, Jaime Palma, Joon Cheol Park, Evangelos Ntrivalas, Joanne Y H Kwak-Kim, Alice Gilman-Sachs, Kenneth Beaman, Michelle L Hastings, Jeffrey N Martin, Dominik M Duelli.   

Abstract

Circulating microRNAs (miRNAs) have emerged as candidate biomarkers of various diseases and conditions including malignancy and pregnancy. This approach requires sensitive and accurate quantitation of miRNA concentrations in body fluids. Herein we report that enzyme-based miRNA quantitation, which is currently the mainstream approach for identifying differences in miRNA abundance among samples, is skewed by endogenous serum factors that co-purify with miRNAs and anticoagulant agents used during collection. Of importance, different miRNAs were affected to varying extent among patient samples. By developing measures to overcome these interfering activities, we increased the accuracy, and improved the sensitivity of miRNA detection up to 30-fold. Overall, the present study outlines key factors that prevent accurate miRNA quantitation in body fluids and provides approaches that enable faithful quantitation of miRNA abundance in body fluids.
Copyright © 2012 American Society for Investigative Pathology and the Association for Molecular Pathology. Published by Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 22154918      PMCID: PMC3338348          DOI: 10.1016/j.jmoldx.2011.09.002

Source DB:  PubMed          Journal:  J Mol Diagn        ISSN: 1525-1578            Impact factor:   5.568


  60 in total

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  70 in total

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Review 2.  Circulating miRNAs as Diagnostic and Prognostic Biomarkers in Common Solid Tumors: Focus on Lung, Breast, Prostate Cancers, and Osteosarcoma.

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6.  A Primary Study on Down-Regulated miR-9-1 and Its Biological Significances in Methylmalonic Acidemia.

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7.  Analysis of circulating non-coding RNAs in a non-invasive and cost-effective manner.

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Review 10.  Data Normalization Strategies for MicroRNA Quantification.

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