Literature DB >> 22153351

Bacterial plasmid partition machinery: a minimalist approach to survival.

Maria A Schumacher1.   

Abstract

The accurate segregation or partition of replicated DNA is essential for ensuring stable genome transmission. Partition of bacterial plasmids requires only three elements: a centromere-like DNA site and two proteins, a partition NTPase, and a centromere-binding protein (CBP). Because of this simplicity, partition systems have served as tractable model systems to study the fundamental molecular mechanisms required for DNA segregation at an atomic level. In the last few years, great progress has been made in this endeavor. Surprisingly, these studies have revealed that although the basic partition components are functionally conserved between three types of plasmid partition systems, these systems employ distinct mechanisms of DNA segregation. This review summarizes the molecular insights into plasmid segregation that have been achieved through these recent structural studies. Copyright Â
© 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 22153351      PMCID: PMC4824291          DOI: 10.1016/j.sbi.2011.11.001

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  49 in total

Review 1.  Plasmid and chromosome partitioning: surprises from phylogeny.

Authors:  K Gerdes; J Møller-Jensen; R Bugge Jensen
Journal:  Mol Microbiol       Date:  2000-08       Impact factor: 3.501

2.  Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.

Authors:  Lisheng Ni; Weijun Xu; Muthiah Kumaraswami; Maria A Schumacher
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-04       Impact factor: 11.205

3.  Structure and filament dynamics of the pSK41 actin-like ParM protein: implications for plasmid DNA segregation.

Authors:  David Popp; Weijun Xu; Akihiro Narita; Anthony J Brzoska; Ronald A Skurray; Neville Firth; Umesh Ghoshdastider; Umesh Goshdastider; Yuichiro Maéda; Robert C Robinson; Maria A Schumacher
Journal:  J Biol Chem       Date:  2010-01-27       Impact factor: 5.157

Review 4.  MinD and role of the deviant Walker A motif, dimerization and membrane binding in oscillation.

Authors:  Joe Lutkenhaus; M Sundaramoorthy
Journal:  Mol Microbiol       Date:  2003-04       Impact factor: 3.501

5.  Partition mechanism of F plasmid: two plasmid gene-encoded products and a cis-acting region are involved in partition.

Authors:  T Ogura; S Hiraga
Journal:  Cell       Date:  1983-02       Impact factor: 41.582

6.  Iteron-binding ORF157 and FtsZ-like ORF156 proteins encoded by pBtoxis play a role in its replication in Bacillus thuringiensis subsp. israelensis.

Authors:  Mujin Tang; Dennis K Bideshi; Hyun-Woo Park; Brian A Federici
Journal:  J Bacteriol       Date:  2007-09-14       Impact factor: 3.490

7.  F plasmid partition depends on interaction of SopA with non-specific DNA.

Authors:  Jean-Philippe Castaing; Jean-Yves Bouet; David Lane
Journal:  Mol Microbiol       Date:  2008-09-30       Impact factor: 3.501

8.  ATP control of dynamic P1 ParA-DNA interactions: a key role for the nucleoid in plasmid partition.

Authors:  Anthony G Vecchiarelli; Yong-Woon Han; Xin Tan; Michiyo Mizuuchi; Rodolfo Ghirlando; Christian Biertümpfel; Barbara E Funnell; Kiyoshi Mizuuchi
Journal:  Mol Microbiol       Date:  2010-07-27       Impact factor: 3.501

9.  Sequence-specific DNA binding determined by contacts outside the helix-turn-helix motif of the ParB homolog KorB.

Authors:  Dheeraj Khare; Günter Ziegelin; Erich Lanka; Udo Heinemann
Journal:  Nat Struct Mol Biol       Date:  2004-05-30       Impact factor: 15.369

10.  Structures of omega repressors bound to direct and inverted DNA repeats explain modulation of transcription.

Authors:  Wilhelm Andreas Weihofen; Aslan Cicek; Florencia Pratto; Juan Carlos Alonso; Wolfram Saenger
Journal:  Nucleic Acids Res       Date:  2006-03-09       Impact factor: 16.971

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  28 in total

1.  Tubulin homolog TubZ in a phage-encoded partition system.

Authors:  María A Oliva; Antonio J Martin-Galiano; Yoshihiko Sakaguchi; José M Andreu
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-26       Impact factor: 11.205

2.  Breaking and restoring the hydrophobic core of a centromere-binding protein.

Authors:  Sadia Saeed; Thomas A Jowitt; Jim Warwicker; Finbarr Hayes
Journal:  J Biol Chem       Date:  2015-02-23       Impact factor: 5.157

3.  Uncoupling of nucleotide hydrolysis and polymerization in the ParA protein superfamily disrupts DNA segregation dynamics.

Authors:  Aneta Dobruk-Serkowska; Marisa Caccamo; Fernando Rodríguez-Castañeda; Meiyi Wu; Kerstyn Bryce; Irene Ng; Maria A Schumacher; Daniela Barillà; Finbarr Hayes
Journal:  J Biol Chem       Date:  2012-10-23       Impact factor: 5.157

4.  The TubR-centromere complex adopts a double-ring segrosome structure in Type III partition systems.

Authors:  Bárbara Martín-García; Alejandro Martín-González; Carolina Carrasco; Ana M Hernández-Arriaga; Rubén Ruíz-Quero; Ramón Díaz-Orejas; Clara Aicart-Ramos; Fernando Moreno-Herrero; María A Oliva
Journal:  Nucleic Acids Res       Date:  2018-06-20       Impact factor: 16.971

5.  Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.

Authors:  Maria A Schumacher; Nam K Tonthat; Jeehyun Lee; Fernando A Rodriguez-Castañeda; Naga Babu Chinnam; Anne K Kalliomaa-Sanford; Irene W Ng; Madhuri T Barge; Porsha L R Shaw; Daniela Barillà
Journal:  Science       Date:  2015-09-04       Impact factor: 47.728

6.  Function, expression, specificity, diversity and incompatibility of actinobacteriophage parABS systems.

Authors:  Rebekah M Dedrick; Travis N Mavrich; Wei L Ng; Juan C Cervantes Reyes; Matthew R Olm; Rachael E Rush; Deborah Jacobs-Sera; Daniel A Russell; Graham F Hatfull
Journal:  Mol Microbiol       Date:  2016-06-10       Impact factor: 3.501

Review 7.  Exotic mitotic mechanisms.

Authors:  Hauke Drechsler; Andrew D McAinsh
Journal:  Open Biol       Date:  2012-12-05       Impact factor: 6.411

8.  Reconstitution of a prokaryotic minus end-tracking system using TubRC centromeric complexes and tubulin-like protein TubZ filaments.

Authors:  Gero Fink; Jan Löwe
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-30       Impact factor: 12.779

9.  Plasmid-Encoded RepA Proteins Specifically Autorepress Individual repABC Operons in the Multipartite Rhizobium leguminosarum bv. trifolii Genome.

Authors:  Kamil Żebracki; Piotr Koper; Małgorzata Marczak; Anna Skorupska; Andrzej Mazur
Journal:  PLoS One       Date:  2015-07-06       Impact factor: 3.240

10.  A repeat sequence causes competition of ColE1-type plasmids.

Authors:  Mei-Hui Lin; Jen-Fen Fu; Shih-Tung Liu
Journal:  PLoS One       Date:  2013-04-16       Impact factor: 3.240

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