Literature DB >> 22538818

Tubulin homolog TubZ in a phage-encoded partition system.

María A Oliva1, Antonio J Martin-Galiano, Yoshihiko Sakaguchi, José M Andreu.   

Abstract

Partition systems are responsible for the process whereby large and essential plasmids are accurately positioned to daughter cells during bacterial division. They are typically made of three components: a centromere-like DNA zone, an adaptor protein, and an assembling protein that is either a Walker-box ATPase (type I) or an actin-like ATPase (type II). A recently described type III segregation system has a tubulin/FtsZ-like protein, called TubZ, for plasmid movement. Here, we present the 2.3 Å structure and dynamic assembly of a TubZ tubulin homolog from a bacteriophage and unravel the Clostridium botulinum phage c-st type III partition system. Using biochemical and biophysical approaches, we prove that a gene upstream from tubZ encodes the partner TubR and localize the centromeric region (tubS), both of which are essential for anchoring phage DNA to the motile TubZ filaments. Finally, we describe a conserved fourth component, TubY, which modulates the TubZ-R-S complex interaction.

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Year:  2012        PMID: 22538818      PMCID: PMC3356609          DOI: 10.1073/pnas.1121546109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  The genome sequence of Clostridium botulinum type C neurotoxin-converting phage and the molecular mechanisms of unstable lysogeny.

Authors:  Yoshihiko Sakaguchi; Tetsuya Hayashi; Ken Kurokawa; Keisuke Nakayama; Kenshiro Oshima; Yukako Fujinaga; Makoto Ohnishi; Eiichi Ohtsubo; Masahira Hattori; Keiji Oguma
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-15       Impact factor: 11.205

2.  Structural insights into FtsZ protofilament formation.

Authors:  Maria A Oliva; Suzanne C Cordell; Jan Löwe
Journal:  Nat Struct Mol Biol       Date:  2004-11-21       Impact factor: 15.369

3.  Auto-rickshaw: an automated crystal structure determination platform as an efficient tool for the validation of an X-ray diffraction experiment.

Authors:  Santosh Panjikar; Venkataraman Parthasarathy; Victor S Lamzin; Manfred S Weiss; Paul A Tucker
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-03-24

4.  GTP-dependent polymerization of the tubulin-like RepX replication protein encoded by the pXO1 plasmid of Bacillus anthracis.

Authors:  Syam P Anand; Parvez Akhtar; Eowyn Tinsley; Simon C Watkins; Saleem A Khan
Journal:  Mol Microbiol       Date:  2008-01-02       Impact factor: 3.501

Review 5.  Tubulin and FtsZ form a distinct family of GTPases.

Authors:  E Nogales; K H Downing; L A Amos; J Löwe
Journal:  Nat Struct Biol       Date:  1998-06

6.  Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea.

Authors:  Nitin S Baliga; Richard Bonneau; Marc T Facciotti; Min Pan; Gustavo Glusman; Eric W Deutsch; Paul Shannon; Yulun Chiu; Rueyhung Sting Weng; Rueichi Richie Gan; Pingliang Hung; Shailesh V Date; Edward Marcotte; Leroy Hood; Wailap Victor Ng
Journal:  Genome Res       Date:  2004-11       Impact factor: 9.043

7.  Characterization of bacteriophage nucleic acids obtained from Clostridium botulinum types C and D.

Authors:  N Fujii; K Oguma; N Yokosawa; K Kimura; K Tsuzuki
Journal:  Appl Environ Microbiol       Date:  1988-01       Impact factor: 4.792

8.  In vitro assembly studies of FtsZ/tubulin-like proteins (TubZ) from Bacillus plasmids: evidence for a capping mechanism.

Authors:  Yaodong Chen; Harold P Erickson
Journal:  J Biol Chem       Date:  2008-01-15       Impact factor: 5.157

9.  Protein diversity confers specificity in plasmid segregation.

Authors:  Timothy J G Fothergill; Daniela Barillà; Finbarr Hayes
Journal:  J Bacteriol       Date:  2005-04       Impact factor: 3.490

Review 10.  The bacterial segrosome: a dynamic nucleoprotein machine for DNA trafficking and segregation.

Authors:  Finbarr Hayes; Daniela Barillà
Journal:  Nat Rev Microbiol       Date:  2006-02       Impact factor: 60.633

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  32 in total

1.  Superstructure of the centromeric complex of TubZRC plasmid partitioning systems.

Authors:  Christopher H S Aylett; Jan Löwe
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-25       Impact factor: 11.205

2.  A novel transcriptional activator, tubX, is required for the stability of Bacillus sphaericus mosquitocidal plasmid pBsph.

Authors:  Yong Ge; Ni Zhao; Xiaomin Hu; Tingyu Shi; Quanxin Cai; Zhiming Yuan
Journal:  J Bacteriol       Date:  2014-09-29       Impact factor: 3.490

3.  Effects of actin-like proteins encoded by two Bacillus pumilus phages on unstable lysogeny, revealed by genomic analysis.

Authors:  Yihui Yuan; Qin Peng; Dandan Wu; Zheng Kou; Yan Wu; Pengming Liu; Meiying Gao
Journal:  Appl Environ Microbiol       Date:  2014-10-24       Impact factor: 4.792

Review 4.  Microtubule Regulation and Function during Virus Infection.

Authors:  Mojgan H Naghavi; Derek Walsh
Journal:  J Virol       Date:  2017-07-27       Impact factor: 5.103

5.  Crystallization and preliminary X-ray data analysis of the pXO1 plasmid-partitioning factor TubZ from Bacillus cereus.

Authors:  Shota Hoshino; Takahisa Maki; Ikuko Hayashi
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-11-19

6.  Bacterial tubulin TubZ-Bt transitions between a two-stranded intermediate and a four-stranded filament upon GTP hydrolysis.

Authors:  Elizabeth A Montabana; David A Agard
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-18       Impact factor: 11.205

7.  Inside out: tubulin cytomotive filaments versus microtubules.

Authors:  Haixin Sui
Journal:  Structure       Date:  2014-04-08       Impact factor: 5.006

8.  A prophage-encoded actin-like protein required for efficient viral DNA replication in bacteria.

Authors:  Catriona Donovan; Antonia Heyer; Eugen Pfeifer; Tino Polen; Anja Wittmann; Reinhard Krämer; Julia Frunzke; Marc Bramkamp
Journal:  Nucleic Acids Res       Date:  2015-04-27       Impact factor: 16.971

9.  Filament formation of the FtsZ/tubulin-like protein TubZ from the Bacillus cereus pXO1 plasmid.

Authors:  Shota Hoshino; Ikuko Hayashi
Journal:  J Biol Chem       Date:  2012-07-30       Impact factor: 5.157

10.  The IntXO-PSL Recombination System Is a Key Component of the Second Maintenance System for Bacillus anthracis Plasmid pXO1.

Authors:  Andrei P Pomerantsev; Catherine Rappole; Zanetta Chang; Margaret Chahoud; Stephen H Leppla
Journal:  J Bacteriol       Date:  2016-06-27       Impact factor: 3.490

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