Literature DB >> 22148715

Femtosecond photodynamics of the red/green cyanobacteriochrome NpR6012g4 from Nostoc punctiforme. 1. Forward dynamics.

Peter W Kim1, Lucy H Freer, Nathan C Rockwell, Shelley S Martin, J Clark Lagarias, Delmar S Larsen.   

Abstract

Phytochromes are well-known red/far-red photosensory proteins that utilize the photoisomerization of a linear tetrapyrrole (bilin) chromophore to detect the ratio of red to far-red light. Cyanobacteriochromes (CBCRs) are related photosensory proteins with a bilin-binding GAF domain, but much more diverse spectral sensitivity, with five recognized subfamilies of CBCRs described to date. The mechanisms that underlie this spectral diversity have not yet been fully elucidated. One of the main CBCR subfamilies photoconverts between a red-absorbing ground state, like the familiar P(r) state of phytochromes, and a green-absorbing photoproduct (P(g)). Here, we examine the ultrafast forward photodynamics of the red/green CBCR NpR6012g4 from the NpR6012 locus of the nitrogen-fixing cyanobacterium Nostoc punctiforme. Using transient absorption spectroscopy with broadband detection and multicomponent global analysis, we observed multiphasic excited-state dynamics that induces the forward reaction (red-absorbing to green-absorbing), which we interpret as arising from ground-state heterogeneity. Excited-state decays with lifetimes of 55 and 345 ps generate the primary photoproduct (Lumi-R), and the fastest decay (5 ps) did not produce Lumi-R. Although the photoinduced kinetics of Npr6012g4 is comparable with that of the Cph1 phytochrome isolated from Synechocystis cyanobacteria, NpR6012g4 exhibits a ≥2-3-fold higher photochemical quantum yield. Understanding the structural basis of this enhanced quantum yield may prove to be useful in increasing the photochemical efficiency of other bilin-based photosensors.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22148715     DOI: 10.1021/bi201507k

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  23 in total

1.  The interplay between chromophore and protein determines the extended excited state dynamics in a single-domain phytochrome.

Authors:  Chavdar Slavov; Tobias Fischer; Avishai Barnoy; Heewhan Shin; Aditya G Rao; Christian Wiebeler; Xiaoli Zeng; Yafang Sun; Qianzhao Xu; Alexander Gutt; Kai-Hong Zhao; Wolfgang Gärtner; Xiaojing Yang; Igor Schapiro; Josef Wachtveitl
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-26       Impact factor: 11.205

2.  Bacteriophytochrome Photoisomerization Proceeds Homogeneously Despite Heterogeneity in Ground State.

Authors:  Cheng Wang; Moira L Flanagan; Ryan D McGillicuddy; Haibin Zheng; Alan Ruvim Ginzburg; Xiaojing Yang; Keith Moffat; Gregory S Engel
Journal:  Biophys J       Date:  2016-11-15       Impact factor: 4.033

3.  Structures of cyanobacteriochromes from phototaxis regulators AnPixJ and TePixJ reveal general and specific photoconversion mechanism.

Authors:  Rei Narikawa; Takami Ishizuka; Norifumi Muraki; Tomoo Shiba; Genji Kurisu; Masahiko Ikeuchi
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-19       Impact factor: 11.205

4.  Rational conversion of chromophore selectivity of cyanobacteriochromes to accept mammalian intrinsic biliverdin.

Authors:  Keiji Fushimi; Takatsugu Miyazaki; Yuto Kuwasaki; Takahiro Nakajima; Tatsuro Yamamoto; Kazushi Suzuki; Yoshibumi Ueda; Keita Miyake; Yuka Takeda; Jae-Hoon Choi; Hirokazu Kawagishi; Enoch Y Park; Masahiko Ikeuchi; Moritoshi Sato; Rei Narikawa
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-04       Impact factor: 11.205

5.  1H, 15N, and 13C chemical shift assignments of cyanobacteriochrome NpR6012g4 in the red-absorbing dark state.

Authors:  Qinhong Yu; Sunghyuk Lim; Nathan C Rockwell; Shelley S Martin; J Clark Lagarias; James B Ames
Journal:  Biomol NMR Assign       Date:  2015-10-19       Impact factor: 0.746

6.  Excitation energy transfer and vibronic coherence in intact phycobilisomes.

Authors:  Sourav Sil; Ryan W Tilluck; Nila Mohan T M; Chase H Leslie; Justin B Rose; Maria Agustina Domínguez-Martín; Wenjing Lou; Cheryl A Kerfeld; Warren F Beck
Journal:  Nat Chem       Date:  2022-09-19       Impact factor: 24.274

Review 7.  The Red Edge: Bilin-Binding Photoreceptors as Optogenetic Tools and Fluorescence Reporters.

Authors:  Kun Tang; Hannes M Beyer; Matias D Zurbriggen; Wolfgang Gärtner
Journal:  Chem Rev       Date:  2021-10-20       Impact factor: 72.087

8.  Green/red cyanobacteriochromes regulate complementary chromatic acclimation via a protochromic photocycle.

Authors:  Yuu Hirose; Nathan C Rockwell; Kaori Nishiyama; Rei Narikawa; Yutaka Ukaji; Katsuhiko Inomata; J Clark Lagarias; Masahiko Ikeuchi
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-11       Impact factor: 11.205

9.  Ultrafast E to Z photoisomerization dynamics of the Cph1 phytochrome.

Authors:  Peter W Kim; Jie Pan; Nathan C Rockwell; Che-Wei Chang; Keenan C Taylor; J Clark Lagarias; Delmar S Larsen
Journal:  Chem Phys Lett       Date:  2012-08-31       Impact factor: 2.328

10.  Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4.

Authors:  Sunghyuk Lim; Qinhong Yu; Sean M Gottlieb; Che-Wei Chang; Nathan C Rockwell; Shelley S Martin; Dorte Madsen; J Clark Lagarias; Delmar S Larsen; James B Ames
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-09       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.