Literature DB >> 26482922

1H, 15N, and 13C chemical shift assignments of cyanobacteriochrome NpR6012g4 in the red-absorbing dark state.

Qinhong Yu1, Sunghyuk Lim1, Nathan C Rockwell2, Shelley S Martin2, J Clark Lagarias2, James B Ames3.   

Abstract

Cyanobacteriochrome (CBCR) photosensory proteins are phytochrome homologs using bilin chromophores for light sensing across the visible spectrum. NpR6012g4 is a CBCR from Nostoc punctiforme that serves as a model for a widespread CBCR subfamily with red/green photocycles. We report NMR chemical shift assignments for both the protein backbone and side-chain resonances of the red-absorbing dark state of NpR6012g4 (BMRB no. 26582).

Entities:  

Keywords:  CBCR; Cyanobacteria; NMR; Photoreceptor; Phytochrome; Tetrapyrrole

Mesh：

Substances：

Year:  2015        PMID： 26482922      PMCID： PMC4789077          DOI： 10.1007/s12104-015-9653-8

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN： 1874-270X            Impact factor:   0.746


  12 in total

1.  Genetic engineering of phytochrome biosynthesis in bacteria.

Authors:  G A Gambetta; J C Lagarias
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-11       Impact factor: 11.205

2.  Femtosecond photodynamics of the red/green cyanobacteriochrome NpR6012g4 from Nostoc punctiforme. 1. Forward dynamics.

Authors:  Peter W Kim; Lucy H Freer; Nathan C Rockwell; Shelley S Martin; J Clark Lagarias; Delmar S Larsen
Journal:  Biochemistry       Date:  2012-01-06       Impact factor: 3.162

3.  The chemical shift index: a fast and simple method for the assignment of protein secondary structure through NMR spectroscopy.

Authors:  D S Wishart; B D Sykes; F M Richards
Journal:  Biochemistry       Date:  1992-02-18       Impact factor: 3.162

Review 4.  Cyanobacteriochromes: a new superfamily of tetrapyrrole-binding photoreceptors in cyanobacteria.

Authors:  Masahiko Ikeuchi; Takami Ishizuka
Journal:  Photochem Photobiol Sci       Date:  2008-08-18       Impact factor: 3.982

5.  Conserved phenylalanine residues are required for blue-shifting of cyanobacteriochrome photoproducts.

Authors:  Nathan C Rockwell; Shelley S Martin; Alexander G Gulevich; J Clark Lagarias
Journal:  Biochemistry       Date:  2014-05-06       Impact factor: 3.162

Review 6.  Bacterial phytochromes: more than meets the light.

Authors:  Michele E Auldridge; Katrina T Forest
Journal:  Crit Rev Biochem Mol Biol       Date:  2011-02       Impact factor: 8.250

7.  Characterization of Red/Green Cyanobacteriochrome NpR6012g4 by Solution Nuclear Magnetic Resonance Spectroscopy: A Protonated Bilin Ring System in Both Photostates.

Authors:  Nathan C Rockwell; Shelley S Martin; Sunghyuk Lim; J Clark Lagarias; James B Ames
Journal:  Biochemistry       Date:  2015-04-14       Impact factor: 3.162

8.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

9.  Characterization of Red/Green Cyanobacteriochrome NpR6012g4 by Solution Nuclear Magnetic Resonance Spectroscopy: A Hydrophobic Pocket for the C15-E,anti Chromophore in the Photoproduct.

Authors:  Nathan C Rockwell; Shelley S Martin; Sunghyuk Lim; J Clark Lagarias; James B Ames
Journal:  Biochemistry       Date:  2015-06-05       Impact factor: 3.162

10.  A novel approach for sequential assignment of 1H, 13C, and 15N spectra of proteins: heteronuclear triple-resonance three-dimensional NMR spectroscopy. Application to calmodulin.

Authors:  M Ikura; L E Kay; A Bax
Journal:  Biochemistry       Date:  1990-05-15       Impact factor: 3.162
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  1 in total

1.  Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4.

Authors:  Sunghyuk Lim; Qinhong Yu; Sean M Gottlieb; Che-Wei Chang; Nathan C Rockwell; Shelley S Martin; Dorte Madsen; J Clark Lagarias; Delmar S Larsen; James B Ames
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-09       Impact factor: 11.205
  1 in total

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