Literature DB >> 22147389

Novel metrics for evaluating improvement in discrimination: net reclassification and integrated discrimination improvement for normal variables and nested models.

Michael J Pencina1, Ralph B D'Agostino, Olga V Demler.   

Abstract

Net reclassification and integrated discrimination improvements have been proposed as alternatives to the increase in the area under the curve for evaluating improvement in the performance of risk assessment algorithms introduced by the addition of new phenotypic or genetic markers. In this paper, we demonstrate that in the setting of linear discriminant analysis, under the assumptions of multivariate normality, all three measures can be presented as functions of the squared Mahalanobis distance. This relationship affords an interpretation of the magnitude of these measures in the familiar language of effect size for uncorrelated variables. Furthermore, it allows us to conclude that net reclassification improvement can be viewed as a universal measure of effect size. Our theoretical developments are illustrated with an example based on the Framingham Heart Study risk assessment model for high-risk men in primary prevention of cardiovascular disease.
Copyright © 2011 John Wiley & Sons, Ltd.

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Year:  2011        PMID: 22147389      PMCID: PMC3341978          DOI: 10.1002/sim.4348

Source DB:  PubMed          Journal:  Stat Med        ISSN: 0277-6715            Impact factor:   2.373


  25 in total

1.  Estimation of time-dependent area under the ROC curve for long-term risk prediction.

Authors:  Lloyd E Chambless; Guoqing Diao
Journal:  Stat Med       Date:  2006-10-30       Impact factor: 2.373

Review 2.  Assessment of claims of improved prediction beyond the Framingham risk score.

Authors:  Ioanna Tzoulaki; George Liberopoulos; John P A Ioannidis
Journal:  JAMA       Date:  2009-12-02       Impact factor: 56.272

3.  Estimation of the probability of an event as a function of several independent variables.

Authors:  S H Walker; D B Duncan
Journal:  Biometrika       Date:  1967-06       Impact factor: 2.445

4.  Equivalence of improvement in area under ROC curve and linear discriminant analysis coefficient under assumption of normality.

Authors:  Olga V Demler; Michael J Pencina; Ralph B D'Agostino
Journal:  Stat Med       Date:  2011-02-21       Impact factor: 2.373

Review 5.  Multivariable prognostic models: issues in developing models, evaluating assumptions and adequacy, and measuring and reducing errors.

Authors:  F E Harrell; K L Lee; D B Mark
Journal:  Stat Med       Date:  1996-02-28       Impact factor: 2.373

6.  Extensions of net reclassification improvement calculations to measure usefulness of new biomarkers.

Authors:  Michael J Pencina; Ralph B D'Agostino; Ewout W Steyerberg
Journal:  Stat Med       Date:  2010-11-05       Impact factor: 2.373

7.  Use and misuse of the receiver operating characteristic curve in risk prediction.

Authors:  Nancy R Cook
Journal:  Circulation       Date:  2007-02-20       Impact factor: 29.690

8.  Decision curve analysis: a novel method for evaluating prediction models.

Authors:  Andrew J Vickers; Elena B Elkin
Journal:  Med Decis Making       Date:  2006 Nov-Dec       Impact factor: 2.583

9.  General cardiovascular risk profile for use in primary care: the Framingham Heart Study.

Authors:  Ralph B D'Agostino; Ramachandran S Vasan; Michael J Pencina; Philip A Wolf; Mark Cobain; Joseph M Massaro; William B Kannel
Journal:  Circulation       Date:  2008-01-22       Impact factor: 29.690

10.  Assessing the value of risk predictions by using risk stratification tables.

Authors:  Holly Janes; Margaret S Pepe; Wen Gu
Journal:  Ann Intern Med       Date:  2008-11-18       Impact factor: 25.391

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  101 in total

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2.  Improved performance of epidemiologic and genetic risk models for rheumatoid arthritis serologic phenotypes using family history.

Authors:  Jeffrey A Sparks; Chia-Yen Chen; Xia Jiang; Johan Askling; Linda T Hiraki; Susan Malspeis; Lars Klareskog; Lars Alfredsson; Karen H Costenbader; Elizabeth W Karlson
Journal:  Ann Rheum Dis       Date:  2014-03-31       Impact factor: 19.103

3.  Evidence for a Causal Role of the SH2B3-β2M Axis in Blood Pressure Regulation.

Authors:  Joshua A Keefe; Shih-Jen Hwang; Tianxiao Huan; Michael Mendelson; Chen Yao; Paul Courchesne; Mohamed A Saleh; Meena S Madhur; Daniel Levy
Journal:  Hypertension       Date:  2019-02       Impact factor: 10.190

4.  Assessing Risk for Adverse Outcomes in Older Adults: The Need to Include Both Physical Frailty and Cognition.

Authors:  Márlon J R Aliberti; Irena S Cenzer; Alexander K Smith; Sei J Lee; Kristine Yaffe; Kenneth E Covinsky
Journal:  J Am Geriatr Soc       Date:  2018-11-23       Impact factor: 5.562

5.  The Best Predictors of Survival: Do They Vary by Age, Sex, and Race?

Authors:  Noreen Goldman; Dana A Glei; Maxine Weinstein
Journal:  Popul Dev Rev       Date:  2017-07-17

6.  Predicting stroke through genetic risk functions: the CHARGE Risk Score Project.

Authors:  Carla A Ibrahim-Verbaas; Myriam Fornage; Joshua C Bis; Seung Hoan Choi; Bruce M Psaty; James B Meigs; Madhu Rao; Mike Nalls; Joao D Fontes; Christopher J O'Donnell; Sekar Kathiresan; Georg B Ehret; Caroline S Fox; Rainer Malik; Martin Dichgans; Helena Schmidt; Jari Lahti; Susan R Heckbert; Thomas Lumley; Kenneth Rice; Jerome I Rotter; Kent D Taylor; Aaron R Folsom; Eric Boerwinkle; Wayne D Rosamond; Eyal Shahar; Rebecca F Gottesman; Peter J Koudstaal; Najaf Amin; Renske G Wieberdink; Abbas Dehghan; Albert Hofman; André G Uitterlinden; Anita L Destefano; Stephanie Debette; Luting Xue; Alexa Beiser; Philip A Wolf; Charles Decarli; M Arfan Ikram; Sudha Seshadri; Thomas H Mosley; W T Longstreth; Cornelia M van Duijn; Lenore J Launer
Journal:  Stroke       Date:  2014-01-16       Impact factor: 7.914

7.  Understanding increments in model performance metrics.

Authors:  Michael J Pencina; Ralph B D'Agostino; Joseph M Massaro
Journal:  Lifetime Data Anal       Date:  2012-12-16       Impact factor: 1.588

8.  Autoantibodies targeting galactose-deficient IgA1 associate with progression of IgA nephropathy.

Authors:  Francois Berthoux; Hitoshi Suzuki; Lise Thibaudin; Hiroyuki Yanagawa; Nicolas Maillard; Christophe Mariat; Yasuhiko Tomino; Bruce A Julian; Jan Novak
Journal:  J Am Soc Nephrol       Date:  2012-08-16       Impact factor: 10.121

Review 9.  Strategies to predict rheumatoid arthritis development in at-risk populations.

Authors:  Elizabeth W Karlson; Dirkjan van Schaardenburg; Annette H van der Helm-van Mil
Journal:  Rheumatology (Oxford)       Date:  2014-08-04       Impact factor: 7.580

10.  Genotype prediction of adult type 2 diabetes from adolescence in a multiracial population.

Authors:  Jason L Vassy; Pronabesh Dasmahapatra; James B Meigs; Nicholas J Schork; Costan G Magnussen; Wei Chen; Olli T Raitakari; Michael J Pencina; Seema M Jamal; Gerald S Berenson; Elizabeth Goodman
Journal:  Pediatrics       Date:  2012-10-15       Impact factor: 7.124

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