Literature DB >> 22146715

Cloning and heterologous expression of the vibrioferrin biosynthetic gene cluster from a marine metagenomic library.

Masaki J Fujita1, Nobutada Kimura, Atsushi Sakai, Yoichi Ichikawa, Tomohiro Hanyu, Masami Otsuka.   

Abstract

A biosynthetic gene cluster of siderophore consisting of five open reading frames (ORFs) was cloned by functional screening of a metagenomic library constructed from tidal-flat sediment. Expression of the cloned biosynthetic genes in Escherichia coli led to the production of vibrioferrin, a siderophore originally reported for the marine bacterium Vibrio parahaemolyticus. To the best of our knowledge, this is the first example of heterologous production of a siderophore by biosynthetic genes cloned from a metagenomic library. The cloned cluster was one of the largest of the clusters obtained by functional screening. In this study, we demonstrated and extended the possibility of function-based metagenomic research.

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Year:  2011        PMID: 22146715     DOI: 10.1271/bbb.110379

Source DB:  PubMed          Journal:  Biosci Biotechnol Biochem        ISSN: 0916-8451            Impact factor:   2.043


  14 in total

Review 1.  Metagenomic approaches to understanding phylogenetic diversity in quorum sensing.

Authors:  Nobutada Kimura
Journal:  Virulence       Date:  2014-02-11       Impact factor: 5.882

2.  Xanthoferrin Siderophore Estimation from the Cell-free Culture Supernatants of Different Xanthomonas Strains by HPLC.

Authors:  Sheo Shankar Pandey; Prashantee Singh; Biswajit Samal; Raj Kumar Verma; Subhadeep Chatterjee
Journal:  Bio Protoc       Date:  2017-07-20

Review 3.  Recent Advances in the Heterologous Expression of Biosynthetic Gene Clusters for Marine Natural Products.

Authors:  Yushan Xu; Xinhua Du; Xionghui Yu; Qian Jiang; Kaiwen Zheng; Jinzhong Xu; Pinmei Wang
Journal:  Mar Drugs       Date:  2022-05-24       Impact factor: 6.085

Review 4.  Meta-omic characterization of prokaryotic gene clusters for natural product biosynthesis.

Authors:  Michael M Schofield; David H Sherman
Journal:  Curr Opin Biotechnol       Date:  2013-05-31       Impact factor: 9.740

Review 5.  Biocatalysts and small molecule products from metagenomic studies.

Authors:  Hala A Iqbal; Zhiyang Feng; Sean F Brady
Journal:  Curr Opin Chem Biol       Date:  2012-03-26       Impact factor: 8.822

Review 6.  Mining the metabiome: identifying novel natural products from microbial communities.

Authors:  Aleksandr Milshteyn; Jessica S Schneider; Sean F Brady
Journal:  Chem Biol       Date:  2014-09-18

Review 7.  Biotechnological applications of functional metagenomics in the food and pharmaceutical industries.

Authors:  Laura M Coughlan; Paul D Cotter; Colin Hill; Avelino Alvarez-Ordóñez
Journal:  Front Microbiol       Date:  2015-06-30       Impact factor: 5.640

8.  A Thermostable Bilirubin-Oxidizing Enzyme from Activated Sludge Isolated by a Metagenomic Approach.

Authors:  Nobutada Kimura; Yoichi Kamagata
Journal:  Microbes Environ       Date:  2016-11-23       Impact factor: 2.912

9.  Metagenomic small molecule discovery methods.

Authors:  Zachary Charlop-Powers; Aleksandr Milshteyn; Sean F Brady
Journal:  Curr Opin Microbiol       Date:  2014-07-05       Impact factor: 7.934

10.  Production of avaroferrin and putrebactin by heterologous expression of a deep-sea metagenomic DNA.

Authors:  Masaki J Fujita; Ryuichi Sakai
Journal:  Mar Drugs       Date:  2014-09-12       Impact factor: 5.118

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