| Literature DB >> 22128246 |
Pawel Banasiak1, Barbara Strzalka-Mrozik, Maria Forminska-Kapuscik, Erita Filipek, Urszula Mazurek, Lidia Nawrocka, Ewa Pieczara, Piotr Berezowski, Malgorzata Kimsa.
Abstract
PURPOSE: The aim of this study was to determine differences in the expression profiles of transforming growth factor (TGF) β isoforms in the fragments of anterior lens capsules (ALCs) and peripheral blood mononuclear cells (PBMCs) of pediatric patients with congenital and traumatic cataracts.Entities:
Mesh:
Substances:
Year: 2011 PMID: 22128246 PMCID: PMC3224844
Source DB: PubMed Journal: Mol Vis ISSN: 1090-0535 Impact factor: 2.367
Selected clinical features of the patients with clinically diagnosed congenital or traumatic cataracts.
| F | 19 | 6 |
| M | 21 | 16 |
| Age (years) | 9.8 (4.7–17.6) | 11.3 (3.9–17.9) |
| Right | 18 | 9 |
| Left | 22 | 13 |
| Mean time interval between injury and cataract surgery (months) | - | 14.9 (0.2–156.2) |
| Mean age at the time of injury (years) | - | 10.2 (3.7–17.6) |
| Penetrating | - | 22 |
Values of clinical parameters are expressed as means (minimum-maximum). Abbreviations M and F stand for male and female participants, respectively. *BETTS - Birmingham Eye Trauma Terminology System.
Characteristic of primers used for real-time QRT-PCR.
| Gene | Sequence of primers | Length of amplicon (bp) | Tm (ºC) |
|---|---|---|---|
| Forward: 5’-GAAGGTGAAGGTCGGAGTC-3’ | 226 | 80 | |
| | Reverse: 5’-GAAGATGGTGATGGGATTC-3’ | | |
| Forward:5’-TGAACCGGCCTTTCCTGCTTCTCATG-3’ | 151 | 85 | |
| | Reverse: 5’-GCGGAAGTCAATGTACAGCTGCCGC-3’ | | |
| Forward: 5’-TACTACGCCAAGGAGGTTTACAAA-3’ | 201 | 80 | |
| | Reverse: 5’-TTGTTCAGGCACTCTGGCTTT-3’ | | |
| Forward: 5’-CTGGATTGTGGTTCCATGCA-3’ | 121 | 81 | |
| Reverse: 5’-TCCCCGAATGCCTCACAT-3’ |
bp – base pairs; Tm -melting temperature.
Figure 1The mRNA levels of transforming growth factor β isoforms in anterior lens capsules and peripheral blood mononuclear cells of patients with clinically diagnosed congenital (A) and traumatic cataracts (B). Box and whisker plots present medians±quartiles and extreme values of copy numbers per 1 μg of total RNA; p<0.0001, Kruskal–Wallis test.
The correlations between TGFβ isoforms (copies/μg total RNA) in the ALCs and PBMCs of patients with clinically diagnosed congenital and traumatic cataracts.
| ALCs | PBMCs | ||||||
| - | r=0.683* | r=0.596* | - | r=0.546* | r=0.213 | ||
| r=0.683* | - | r=0.569* | r=0.546* | - | r=-0.129 | ||
| r=0.596* | r=0.569* | - | r=0.213 | r=-0.129 | - | ||
| ALCs | PBMCs | ||||||
| - | r=0.583* | r=0.279 | - | r=-0.218 | r=0.673* | ||
| r=0.583* | - | r=0.331 | r=-0.218 | - | r=-0.151 | ||
| r=0.279 | r=0.331 | - | r=0.673* | r=-0.151 | - | ||
Statistical significance: *p<0.05, Spearman rank correlation test.
Factors associated with TGFβ isoforms’ expression changes in the ALCs and PBMCs of patients with clinically diagnosed congenital cataracts.
| M | 21 | 9682 (4554–19139) | NS | 5119 (1967–15660) | NS | 1915 (1494–2845) | NS |
| F | 19 | 9162 (5792–24306) | 8034 (2154–19968) | 3082 (2062–8230) | |||
| Right | 18 | 11122 (5790–15423) | NS | 7161 (2518–18149) | NS | 2524 (1564–5017) | NS |
| Left | 22 | 8942 (4621–24306) | 5119 (1967–18430) | 2295 (1527–3888) | |||
| M | 21 | 3640 (1519–8691) | NS | 356 (295–529) | NS | 8998 (7261–15053) | NS |
| F | 19 | 4475 (2749–5010) | 330 (265–506) | 16768 (4119–35775) | |||
| Right | 18 | 4475 (1787–7761) | NS | 356 (300–552) | NS | 11827 (6327–35775) | NS |
| Left | 22 | 4070 (2121–7105) | 308 (266–513) | 9788 (6943–19801) | |||
*Median with 25th and 75th quartiles (mRNA copies/µg total RNA). **U Mann–Whitney test. NS – not significant. Abbreviations M and F stand for male and female participants, respectively.