Literature DB >> 22123771

Complete genome sequence of Corynebacterium pseudotuberculosis strain CIP 52.97, isolated from a horse in Kenya.

Louise Teixeira Cerdeira1, Maria Paula Cruz Schneider, Anne Cybelle Pinto, Sintia Silva de Almeida, Anderson Rodrigues dos Santos, Eudes Guilherme Vieira Barbosa, Amjad Ali, Flávia Figueira Aburjaile, Vinicius Augusto Carvalho de Abreu, Luis Carlos Guimarães, Siomar de Castro Soares, Fernanda Alves Dorella, Flávia Souza Rocha, Erick Bol, Pablo Henrique Caracciolo Gomes de Sá, Thiago Souza Lopes, Maria Silvanira Barbosa, Adriana Ribeiro Carneiro, Rommel Thiago Jucá Ramos, Nilson Antônio da Rocha Coimbra, Alex Ranieri Jerônimo Lima, Debmalya Barh, Neha Jain, Sandeep Tiwari, Rathiram Raja, Vasudeo Zambare, Preetam Ghosh, Eva Trost, Andreas Tauch, Anderson Miyoshi, Vasco Azevedo, Artur Silva.   

Abstract

In this work, we report the whole-genome sequence of Corynebacterium pseudotuberculosis bv. equi strain CIP 52.97 (Collection Institut Pasteur), isolated in 1952 from a case of ulcerative lymphangitis in a Kenyan horse, which has evidently caused significant losses to agribusiness. Therefore, obtaining this genome will allow the detection of important targets for postgenomic studies, with the aim of minimizing problems caused by this microorganism.

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Year:  2011        PMID： 22123771      PMCID： PMC3232848          DOI： 10.1128/JB.06293-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  8 in total

1.  Artemis: sequence visualization and annotation.

Authors:  K Rutherford; J Parkhill; J Crook; T Horsnell; P Rice; M A Rajandream; B Barrell
Journal:  Bioinformatics       Date:  2000-10       Impact factor: 6.937

2.  InterProScan--an integration platform for the signature-recognition methods in InterPro.

Authors:  E M Zdobnov; R Apweiler
Journal:  Bioinformatics       Date:  2001-09       Impact factor: 6.937

3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

4.  Rapid hybrid de novo assembly of a microbial genome using only short reads: Corynebacterium pseudotuberculosis I19 as a case study.

Authors:  Louise Teixeira Cerdeira; Adriana Ribeiro Carneiro; Rommel Thiago Jucá Ramos; Sintia Silva de Almeida; Vivian D'Afonseca; Maria Paula Cruz Schneider; Jan Baumbach; Andreas Tauch; John Anthony McCulloch; Vasco Ariston Carvalho Azevedo; Artur Silva
Journal:  J Microbiol Methods       Date:  2011-05-18       Impact factor: 2.363

5.  Corynebacterium pseudotuberculosis infection in horses: 538 cases (1982-1993).

Authors:  M Aleman; S J Spier; W D Wilson; M Doherr
Journal:  J Am Vet Med Assoc       Date:  1996-08-15       Impact factor: 1.936

6.  Risk factors associated with Corynebacterium pseudotuberculosis infection in California horses.

Authors:  M G Doherr; T E Carpenter; K M Hanson; W D Wilson; I A Gardner
Journal:  Prev Vet Med       Date:  1998-06-30       Impact factor: 2.670

Review 7.  Corynebacterium pseudotuberculosis: microbiology, biochemical properties, pathogenesis and molecular studies of virulence.

Authors:  Fernanda Alves Dorella; Luis Gustavo Carvalho Pacheco; Sergio Costa Oliveira; Anderson Miyoshi; Vasco Azevedo
Journal:  Vet Res       Date:  2006 Mar-Apr       Impact factor: 3.683

8.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
  8 in total
  8 in total

1.  Evaluation of ERIC-PCR as genotyping method for Corynebacterium pseudotuberculosis isolates.

Authors:  Elaine M S Dorneles; Jordana A Santana; Dayana Ribeiro; Fernanda Alves Dorella; Alessandro S Guimarães; Mohamed S Moawad; Salah A Selim; Ana Luiza M Garaldi; Anderson Miyoshi; Márcio G Ribeiro; Aurora M G Gouveia; Vasco Azevedo; Marcos B Heinemann; Andrey P Lage
Journal:  PLoS One       Date:  2014-06-05       Impact factor: 3.240

2.  Exploration of Nitrate Reductase Metabolic Pathway in Corynebacterium pseudotuberculosis.

Authors:  Sintia Almeida; Cassiana Sousa; Vinícius Abreu; Carlos Diniz; Elaine M S Dorneles; Andrey P Lage; Debmalya Barh; Vasco Azevedo
Journal:  Int J Genomics       Date:  2017-02-20       Impact factor: 2.326

3.  Assessing the Genotypic Differences between Strains of Corynebacterium pseudotuberculosis biovar equi through Comparative Genomics.

Authors:  Rafael A Baraúna; Rommel T J Ramos; Adonney A O Veras; Kenny C Pinheiro; Leandro J Benevides; Marcus V C Viana; Luís C Guimarães; Judy M Edman; Sharon J Spier; Vasco Azevedo; Artur Silva
Journal:  PLoS One       Date:  2017-01-26       Impact factor: 3.240

4.  Re-sequencing and optical mapping reveals misassemblies and real inversions on Corynebacterium pseudotuberculosis genomes.

Authors:  Thiago de Jesus Sousa; Doglas Parise; Rodrigo Profeta; Mariana Teixeira Dornelles Parise; Anne Cybelle Pinto Gomide; Rodrigo Bentos Kato; Felipe Luiz Pereira; Henrique Cesar Pereira Figueiredo; Rommel Ramos; Bertram Brenig; Artur Luiz da Costa da Silva; Preetam Ghosh; Debmalya Barh; Aristóteles Góes-Neto; Vasco Azevedo
Journal:  Sci Rep       Date:  2019-11-08       Impact factor: 4.379

5.  Cell envelope of corynebacteria: structure and influence on pathogenicity.

Authors:  Andreas Burkovski
Journal:  ISRN Microbiol       Date:  2013-01-21

6.  The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strains.

Authors:  Siomar C Soares; Artur Silva; Eva Trost; Jochen Blom; Rommel Ramos; Adriana Carneiro; Amjad Ali; Anderson R Santos; Anne C Pinto; Carlos Diniz; Eudes G V Barbosa; Fernanda A Dorella; Flávia Aburjaile; Flávia S Rocha; Karina K F Nascimento; Luís C Guimarães; Sintia Almeida; Syed S Hassan; Syeda M Bakhtiar; Ulisses P Pereira; Vinicius A C Abreu; Maria P C Schneider; Anderson Miyoshi; Andreas Tauch; Vasco Azevedo
Journal:  PLoS One       Date:  2013-01-14       Impact factor: 3.240

7.  Corynebacterium pseudotuberculosis Pneumonia in a Veterinary Student Infected During Laboratory Work.

Authors:  Lars Heggelund; Peter Gaustad; Othilde Elise Håvelsrud; Jochen Blom; Lars Borgen; Arve Sundset; Henning Sørum; Stig Sophus Frøland
Journal:  Open Forum Infect Dis       Date:  2015-04-15       Impact factor: 3.835

8.  Co-Expression Networks for Causal Gene Identification Based on RNA-Seq Data of Corynebacterium pseudotuberculosis.

Authors:  Edian F Franco; Pratip Rana; Ana Lidia Queiroz Cavalcante; Artur Luiz da Silva; Anne Cybelle Pinto Gomide; Adriana R Carneiro Folador; Vasco Azevedo; Preetam Ghosh; Rommel T J Ramos
Journal:  Genes (Basel)       Date:  2020-07-14       Impact factor: 4.096
  8 in total

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