Literature DB >> 22123759

Draft genome sequence of the extremely acidophilic biomining bacterium Acidithiobacillus thiooxidans ATCC 19377 provides insights into the evolution of the Acidithiobacillus genus.

Jorge Valdes1, Francisco Ossandon, Raquel Quatrini, Mark Dopson, David S Holmes.   

Abstract

Acidithiobacillus thiooxidans is a mesophilic, extremely acidophilic, chemolithoautotrophic gammaproteobacterium that derives energy from the oxidation of sulfur and inorganic sulfur compounds. Here we present the draft genome sequence of A. thiooxidans ATCC 19377, which has allowed the identification of genes for survival and colonization of extremely acidic environments.

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Year:  2011        PMID： 22123759      PMCID： PMC3232857          DOI： 10.1128/JB.06281-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  17 in total

Review 1.  A challenge for 21st century molecular biology and biochemistry: what are the causes of obligate autotrophy and methanotrophy?

Authors:  Ann P Wood; Jukka P Aurikko; Donovan P Kelly
Journal:  FEMS Microbiol Rev       Date:  2004-06       Impact factor: 16.408

2.  Draft genome of the psychrotolerant acidophile Acidithiobacillus ferrivorans SS3.

Authors:  Maria Liljeqvist; Jorge Valdes; David S Holmes; Mark Dopson
Journal:  J Bacteriol       Date:  2011-06-24       Impact factor: 3.490

3.  Whole-genome transcriptional analysis of chemolithoautotrophic thiosulfate oxidation by Thiobacillus denitrificans under aerobic versus denitrifying conditions.

Authors:  Harry R Beller; Tracy E Letain; Anu Chakicherla; Staci R Kane; Tina C Legler; Matthew A Coleman
Journal:  J Bacteriol       Date:  2006-10       Impact factor: 3.490

4.  Regulation of a novel Acidithiobacillus caldus gene cluster involved in metabolism of reduced inorganic sulfur compounds.

Authors:  Olena I Rzhepishevska; Jorge Valdés; Liucija Marcinkeviciene; Camelia Algora Gallardo; Rolandas Meskys; Violaine Bonnefoy; David S Holmes; Mark Dopson
Journal:  Appl Environ Microbiol       Date:  2007-09-14       Impact factor: 4.792

Review 5.  Heavy metal mining using microbes.

Authors:  Douglas E Rawlings
Journal:  Annu Rev Microbiol       Date:  2002-01-30       Impact factor: 15.500

6.  Sulfur metabolism in the extreme acidophile acidithiobacillus caldus.

Authors:  Stefanie Mangold; Jorge Valdés; David S Holmes; Mark Dopson
Journal:  Front Microbiol       Date:  2011-02-10       Impact factor: 5.640

7.  Characteristics and adaptability of iron- and sulfur-oxidizing microorganisms used for the recovery of metals from minerals and their concentrates.

Authors:  Douglas E Rawlings
Journal:  Microb Cell Fact       Date:  2005-05-06       Impact factor: 5.328

8.  Extending the models for iron and sulfur oxidation in the extreme acidophile Acidithiobacillus ferrooxidans.

Authors:  Raquel Quatrini; Corinne Appia-Ayme; Yann Denis; Eugenia Jedlicki; David S Holmes; Violaine Bonnefoy
Journal:  BMC Genomics       Date:  2009-08-24       Impact factor: 3.969

9.  Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications.

Authors:  Jorge Valdés; Inti Pedroso; Raquel Quatrini; Robert J Dodson; Herve Tettelin; Robert Blake; Jonathan A Eisen; David S Holmes
Journal:  BMC Genomics       Date:  2008-12-11       Impact factor: 3.969

Review 10.  Roles of cyclic diguanylate in the regulation of bacterial pathogenesis.

Authors:  Rita Tamayo; Jason T Pratt; Andrew Camilli
Journal:  Annu Rev Microbiol       Date:  2007       Impact factor: 15.500
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  32 in total

1.  Diversity and ecophysiology of new isolates of extremely acidophilic CS2-converting Acidithiobacillus strains.

Authors:  Marjan J Smeulders; Arjan Pol; Marcel H Zandvoort; Mike S M Jetten; Huub J M Op den Camp
Journal:  Appl Environ Microbiol       Date:  2013-08-30       Impact factor: 4.792

2.  Complete genome sequence of temperate bacteriophage AcaML1 from the extreme acidophile Acidithiobacillus caldus ATCC 51756.

Authors:  Pablo Tapia; Francisco Moya Flores; Paulo C Covarrubias; Lillian G Acuña; David S Holmes; Raquel Quatrini
Journal:  J Virol       Date:  2012-11       Impact factor: 5.103

3.  Role of an archaeal PitA transporter in the copper and arsenic resistance of Metallosphaera sedula, an extreme thermoacidophile.

Authors:  Samuel McCarthy; Chenbing Ai; Garrett Wheaton; Rahul Tevatia; Valerie Eckrich; Robert Kelly; Paul Blum
Journal:  J Bacteriol       Date:  2014-08-04       Impact factor: 3.490

4.  Metal resistance and lithoautotrophy in the extreme thermoacidophile Metallosphaera sedula.

Authors:  Yukari Maezato; Tyler Johnson; Samuel McCarthy; Karl Dana; Paul Blum
Journal:  J Bacteriol       Date:  2012-10-12       Impact factor: 3.490

5.  Tetrathionate-forming thiosulfate dehydrogenase from the acidophilic, chemolithoautotrophic bacterium Acidithiobacillus ferrooxidans.

Authors:  Mei Kikumoto; Shohei Nogami; Tadayoshi Kanao; Jun Takada; Kazuo Kamimura
Journal:  Appl Environ Microbiol       Date:  2012-10-12       Impact factor: 4.792

6.  System-level understanding of the potential acid-tolerance components of Acidithiobacillus thiooxidans ZJJN-3 under extreme acid stress.

Authors:  Shoushuai Feng; Hailin Yang; Wu Wang
Journal:  Extremophiles       Date:  2015-08-12       Impact factor: 2.395

7.  Interaction networks for identifying coupled molecular processes in microbial communities.

Authors:  Magnus Bosse; Alexander Heuwieser; Andreas Heinzel; Ivan Nancucheo; Hivana Melo Barbosa Dall'Agnol; Arno Lukas; George Tzotzos; Bernd Mayer
Journal:  BioData Min       Date:  2015-07-15       Impact factor: 2.522

8.  Ecological roles of dominant and rare prokaryotes in acid mine drainage revealed by metagenomics and metatranscriptomics.

Authors:  Zheng-Shuang Hua; Yu-Jiao Han; Lin-Xing Chen; Jun Liu; Min Hu; Sheng-Jin Li; Jia-Liang Kuang; Patrick S G Chain; Li-Nan Huang; Wen-Sheng Shu
Journal:  ISME J       Date:  2014-11-07       Impact factor: 10.302

9.  Genomic adaptations enabling Acidithiobacillus distribution across wide-ranging hot spring temperatures and pHs.

Authors:  Chanenath Sriaporn; Kathleen A Campbell; Martin J Van Kranendonk; Kim M Handley
Journal:  Microbiome       Date:  2021-06-11       Impact factor: 14.650

10.  High-throughput genome sequencing of lichenizing fungi to assess gene loss in the ammonium transporter/ammonia permease gene family.

Authors:  Tami R McDonald; Olaf Mueller; Fred S Dietrich; François Lutzoni
Journal:  BMC Genomics       Date:  2013-04-04       Impact factor: 3.969
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