Literature DB >> 22108601

All tangled up: how cells direct, manage and exploit topoisomerase function.

Seychelle M Vos1, Elsa M Tretter, Bryan H Schmidt, James M Berger.   

Abstract

Topoisomerases are complex molecular machines that modulate DNA topology to maintain chromosome superstructure and integrity. Although capable of stand-alone activity in vitro, topoisomerases are frequently linked to larger pathways and systems that resolve specific DNA superstructures and intermediates arising from cellular processes such as DNA repair, transcription, replication and chromosome compaction. Topoisomerase activity is indispensible to cells, but requires the transient breakage of DNA strands. This property has been exploited, often for significant clinical benefit, by various exogenous agents that interfere with cell proliferation. Despite decades of study, surprising findings involving topoisomerases continue to emerge with respect to their cellular function, regulation and utility as therapeutic targets.

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Year:  2011        PMID: 22108601      PMCID: PMC4351964          DOI: 10.1038/nrm3228

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  210 in total

1.  Temporal regulation of topoisomerase IV activity in E. coli.

Authors:  Olivier Espeli; Cindy Levine; Heide Hassing; Kenneth J Marians
Journal:  Mol Cell       Date:  2003-01       Impact factor: 17.970

2.  The role of topoisomerase IV in partitioning bacterial replicons and the structure of catenated intermediates in DNA replication.

Authors:  D E Adams; E M Shekhtman; E L Zechiedrich; M B Schmid; N R Cozzarelli
Journal:  Cell       Date:  1992-10-16       Impact factor: 41.582

3.  DNA topoisomerase V: a new fold of mysterious origin.

Authors:  Patrick Forterre
Journal:  Trends Biotechnol       Date:  2006-05-02       Impact factor: 19.536

Review 4.  The major architects of chromatin: architectural proteins in bacteria, archaea and eukaryotes.

Authors:  Martijn S Luijsterburg; Malcolm F White; Roel van Driel; Remus Th Dame
Journal:  Crit Rev Biochem Mol Biol       Date:  2008 Nov-Dec       Impact factor: 8.250

5.  Resolution of converging replication forks by RecQ and topoisomerase III.

Authors:  Catherine Suski; Kenneth J Marians
Journal:  Mol Cell       Date:  2008-06-20       Impact factor: 17.970

6.  DNA topoisomerase VI is essential for endoreduplication in Arabidopsis.

Authors:  Keiko Sugimoto-Shirasu; Nicola J Stacey; Julia Corsar; Keith Roberts; Maureen C McCann
Journal:  Curr Biol       Date:  2002-10-15       Impact factor: 10.834

7.  Roles of DNA topoisomerases in simian virus 40 DNA replication in vitro.

Authors:  L Yang; M S Wold; J J Li; T J Kelly; L F Liu
Journal:  Proc Natl Acad Sci U S A       Date:  1987-02       Impact factor: 11.205

8.  DNA topoisomerase II is required for condensation and separation of mitotic chromosomes in S. pombe.

Authors:  T Uemura; H Ohkura; Y Adachi; K Morino; K Shiozaki; M Yanagida
Journal:  Cell       Date:  1987-09-11       Impact factor: 41.582

9.  Transcription-dependent degradation of topoisomerase I-DNA covalent complexes.

Authors:  Shyamal D Desai; Hui Zhang; Alexandra Rodriguez-Bauman; Jin-Ming Yang; Xiaohua Wu; Murugesan K Gounder; Eric H Rubin; Leroy F Liu
Journal:  Mol Cell Biol       Date:  2003-04       Impact factor: 4.272

10.  BIN4, a novel component of the plant DNA topoisomerase VI complex, is required for endoreduplication in Arabidopsis.

Authors:  Christian Breuer; Nicola J Stacey; Christopher E West; Yunde Zhao; Joanne Chory; Hirokazu Tsukaya; Yoshitaka Azumi; Anthony Maxwell; Keith Roberts; Keiko Sugimoto-Shirasu
Journal:  Plant Cell       Date:  2007-11-30       Impact factor: 11.277

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  256 in total

Review 1.  H-NS Regulates Gene Expression and Compacts the Nucleoid: Insights from Single-Molecule Experiments.

Authors:  Ricksen S Winardhi; Jie Yan; Linda J Kenney
Journal:  Biophys J       Date:  2015-10-06       Impact factor: 4.033

2.  Concentration-response studies of the chromosome-damaging effects of topoisomerase II inhibitors determined in vitro using human TK6 cells.

Authors:  P Gollapudi; V S Bhat; D A Eastmond
Journal:  Mutat Res       Date:  2019-05-15       Impact factor: 2.433

Review 3.  Targeting bacterial topoisomerase I to meet the challenge of finding new antibiotics.

Authors:  Yuk-Ching Tse-Dinh
Journal:  Future Med Chem       Date:  2015       Impact factor: 3.808

4.  TDP2 protects transcription from abortive topoisomerase activity and is required for normal neural function.

Authors:  Fernando Gómez-Herreros; Janneke H M Schuurs-Hoeijmakers; Mark McCormack; Marie T Greally; Stuart Rulten; Rocío Romero-Granados; Timothy J Counihan; Elijah Chaila; Judith Conroy; Sean Ennis; Norman Delanty; Felipe Cortés-Ledesma; Arjan P M de Brouwer; Gianpiero L Cavalleri; Sherif F El-Khamisy; Bert B A de Vries; Keith W Caldecott
Journal:  Nat Genet       Date:  2014-03-23       Impact factor: 38.330

Review 5.  Topoisomerases and the regulation of neural function.

Authors:  Peter J McKinnon
Journal:  Nat Rev Neurosci       Date:  2016-09-15       Impact factor: 34.870

6.  Generation of supercoils in nicked and gapped DNA drives DNA unknotting and postreplicative decatenation.

Authors:  Dusan Racko; Fabrizio Benedetti; Julien Dorier; Yannis Burnier; Andrzej Stasiak
Journal:  Nucleic Acids Res       Date:  2015-07-06       Impact factor: 16.971

7.  Oxidative metabolites of curcumin poison human type II topoisomerases.

Authors:  Adam C Ketron; Odaine N Gordon; Claus Schneider; Neil Osheroff
Journal:  Biochemistry       Date:  2012-12-26       Impact factor: 3.162

8.  The Dynamic Interplay Between DNA Topoisomerases and DNA Topology.

Authors:  Yeonee Seol; Keir C Neuman
Journal:  Biophys Rev       Date:  2016-07-02

Review 9.  Single-molecule nanometry for biological physics.

Authors:  Hajin Kim; Taekjip Ha
Journal:  Rep Prog Phys       Date:  2012-12-18

10.  Metal ion and inter-domain interactions as functional networks in E. coli topoisomerase I.

Authors:  Claudia Sissi; Bokun Cheng; Valentina Lombardo; Yuk-Ching Tse-Dinh; Manlio Palumbo
Journal:  Gene       Date:  2013-04-20       Impact factor: 3.688

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