| Literature DB >> 22090941 |
Meryem Chelghoum, Mebarek Bahnous, Sofiane Bouacida, Thierry Roisnel, Ali Belfaitah.
Abstract
The crystal packing of the title compound, C(6)H(11)N(2)O(+)·I(-), can be described as inter-calated layers lying parallel to (010), with the iodide ions located between the cations. A weak intra-molecular C-H⋯O hydrogen bond occurs within the cation. In the crystal, inter-molecular O-H⋯I hydrogen bonds result in the formation of a three-dimensional network and reinforce the cohesion of the ionic structure.Entities:
Year: 2011 PMID: 22090941 PMCID: PMC3212284 DOI: 10.1107/S1600536811025700
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H11N2O+·I− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1935 reflections |
| θ = 2.4–27.4° | |
| µ = 3.53 mm−1 | |
| β = 93.093 (2)° | Prism, colourless |
| 0.3 × 0.13 × 0.01 mm | |
| Bruker APEXII diffractometer | 1463 reflections with |
| graphite | |
| CCD rotation images, thin slices scans | θmax = 27.4°, θmin = 3.6° |
| Absorption correction: multi-scan ( | |
| 4200 measured reflections | |
| 2035 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2035 reflections | (Δ/σ)max = 0.001 |
| 94 parameters | Δρmax = 0.66 e Å−3 |
| 0 restraints | Δρmin = −0.54 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| I1 | 0.80624 (2) | 0.74882 (2) | 0.413580 (10) | 0.02430 (8) | |
| C1 | 0.6996 (5) | 0.2724 (3) | 0.20049 (17) | 0.0284 (6) | |
| H1A | 0.8326 | 0.2864 | 0.2033 | 0.043* | |
| H1B | 0.6438 | 0.3775 | 0.1716 | 0.043* | |
| H1C | 0.6663 | 0.157 | 0.1728 | 0.043* | |
| N2 | 0.6343 (3) | 0.2668 (2) | 0.28084 (14) | 0.0204 (5) | |
| C3 | 0.4551 (4) | 0.2855 (3) | 0.29967 (18) | 0.0251 (6) | |
| H3 | 0.3528 | 0.3011 | 0.2634 | 0.03* | |
| C4 | 0.4528 (4) | 0.2773 (3) | 0.37988 (17) | 0.0232 (6) | |
| H4 | 0.3482 | 0.2865 | 0.4104 | 0.028* | |
| N5 | 0.6304 (3) | 0.2533 (2) | 0.40871 (13) | 0.0195 (5) | |
| C6 | 0.6882 (4) | 0.2431 (3) | 0.49319 (18) | 0.0271 (6) | |
| H6A | 0.7534 | 0.1265 | 0.5038 | 0.041* | |
| H6B | 0.5807 | 0.2483 | 0.5251 | 0.041* | |
| H6C | 0.7689 | 0.3475 | 0.5071 | 0.041* | |
| C7 | 0.7404 (4) | 0.2472 (3) | 0.34775 (16) | 0.0192 (5) | |
| C8 | 0.9437 (4) | 0.2288 (3) | 0.35238 (19) | 0.0254 (6) | |
| H8A | 0.9867 | 0.2055 | 0.4081 | 0.03* | |
| H8B | 0.9789 | 0.1212 | 0.3202 | 0.03* | |
| O9 | 1.0295 (3) | 0.3905 (2) | 0.32453 (12) | 0.0305 (4) | |
| H9 | 0.9902 | 0.4838 | 0.348 | 0.046* |
| I1 | 0.01963 (12) | 0.02953 (13) | 0.02391 (12) | 0.00057 (7) | 0.00275 (8) | −0.00027 (6) |
| C1 | 0.0296 (16) | 0.0386 (16) | 0.0173 (14) | −0.0004 (12) | 0.0043 (12) | −0.0005 (11) |
| N2 | 0.0192 (11) | 0.0243 (11) | 0.0179 (11) | 0.0006 (8) | 0.0020 (9) | −0.0003 (8) |
| C3 | 0.0170 (14) | 0.0308 (15) | 0.0277 (15) | 0.0020 (11) | 0.0027 (11) | 0.0000 (11) |
| C4 | 0.0147 (13) | 0.0310 (14) | 0.0242 (14) | 0.0011 (10) | 0.0029 (11) | 0.0007 (10) |
| N5 | 0.0154 (11) | 0.0256 (11) | 0.0176 (11) | 0.0004 (8) | 0.0017 (9) | −0.0005 (8) |
| C6 | 0.0209 (14) | 0.0408 (17) | 0.0196 (14) | 0.0001 (11) | 0.0011 (11) | 0.0017 (10) |
| C7 | 0.0161 (12) | 0.0217 (13) | 0.0200 (13) | −0.0007 (10) | 0.0026 (10) | 0.0003 (9) |
| C8 | 0.0172 (14) | 0.0315 (15) | 0.0276 (15) | 0.0006 (11) | 0.0026 (12) | 0.0005 (11) |
| O9 | 0.0217 (10) | 0.0301 (10) | 0.0410 (11) | −0.0052 (9) | 0.0133 (8) | −0.0041 (9) |
| C1—N2 | 1.464 (4) | N5—C7 | 1.343 (3) |
| C1—H1A | 0.98 | N5—C6 | 1.468 (4) |
| C1—H1B | 0.98 | C6—H6A | 0.98 |
| C1—H1C | 0.98 | C6—H6B | 0.98 |
| N2—C7 | 1.345 (3) | C6—H6C | 0.98 |
| N2—C3 | 1.376 (4) | C7—C8 | 1.497 (4) |
| C3—C4 | 1.357 (4) | C8—O9 | 1.419 (3) |
| C3—H3 | 0.95 | C8—H8A | 0.99 |
| C4—N5 | 1.379 (4) | C8—H8B | 0.99 |
| C4—H4 | 0.95 | O9—H9 | 0.84 |
| N2—C1—H1A | 109.5 | C4—N5—C6 | 124.6 (2) |
| N2—C1—H1B | 109.5 | N5—C6—H6A | 109.5 |
| H1A—C1—H1B | 109.5 | N5—C6—H6B | 109.5 |
| N2—C1—H1C | 109.5 | H6A—C6—H6B | 109.5 |
| H1A—C1—H1C | 109.5 | N5—C6—H6C | 109.5 |
| H1B—C1—H1C | 109.5 | H6A—C6—H6C | 109.5 |
| C7—N2—C3 | 109.5 (2) | H6B—C6—H6C | 109.5 |
| C7—N2—C1 | 125.3 (3) | N5—C7—N2 | 107.2 (3) |
| C3—N2—C1 | 125.2 (3) | N5—C7—C8 | 127.0 (3) |
| C4—C3—N2 | 106.9 (3) | N2—C7—C8 | 125.7 (3) |
| C4—C3—H3 | 126.6 | O9—C8—C7 | 111.6 (2) |
| N2—C3—H3 | 126.6 | O9—C8—H8A | 109.3 |
| C3—C4—N5 | 107.2 (3) | C7—C8—H8A | 109.3 |
| C3—C4—H4 | 126.4 | O9—C8—H8B | 109.3 |
| N5—C4—H4 | 126.4 | C7—C8—H8B | 109.3 |
| C7—N5—C4 | 109.3 (2) | H8A—C8—H8B | 108 |
| C7—N5—C6 | 126.1 (3) | C8—O9—H9 | 109.5 |
| C7—N2—C3—C4 | 0.1 (3) | C6—N5—C7—C8 | 0.1 (3) |
| C1—N2—C3—C4 | −178.4 (2) | C3—N2—C7—N5 | 0.0 (2) |
| N2—C3—C4—N5 | −0.2 (3) | C1—N2—C7—N5 | 178.48 (18) |
| C3—C4—N5—C7 | 0.2 (2) | C3—N2—C7—C8 | −178.1 (2) |
| C3—C4—N5—C6 | 178.15 (19) | C1—N2—C7—C8 | 0.3 (3) |
| C4—N5—C7—N2 | −0.1 (2) | N5—C7—C8—O9 | −113.9 (3) |
| C6—N5—C7—N2 | −178.06 (18) | N2—C7—C8—O9 | 63.8 (3) |
| C4—N5—C7—C8 | 178.0 (2) |
| H··· | ||||
| O9—H9···I1 | 0.84 | 2.62 | 3.4504 (18) | 169 |
| C1—H1A···O9 | 0.98 | 2.55 | 3.230 (4) | 126 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O9—H9⋯I1 | 0.84 | 2.62 | 3.4504 (18) | 169 |
| C1—H1 | 0.98 | 2.55 | 3.230 (4) | 126 |