| Literature DB >> 24109409 |
Mohamed El Hadi Said1, Abdelmalek Bouraiou, Sofiane Bouacida, Hocine Merazig, Ali Belfaitah, Aissa Chibani.
Abstract
The crystal packing of the title salt, C6H11N2O(+)·I3 (-), can be described as consisting of alternating layers of cations and anions parallel to the (100) plane along the a-axis direction. The components are linked by O-H⋯I, C-H⋯I and C-H⋯O interactions, generating a three-dimensional network. The O atom deviates from the imidazol ring by 0.896 (2) Å.Entities:
Year: 2013 PMID: 24109409 PMCID: PMC3793822 DOI: 10.1107/S1600536813020266
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H11N2O+·I3− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 5058 reflections |
| θ = 2.2–25.1° | |
| µ = 7.44 mm−1 | |
| β = 96.026 (7)° | Stick, brown |
| 0.24 × 0.03 × 0.02 mm | |
| Bruker APEXII diffractometer | 2104 reflections with |
| Graphite monochromator | |
| CCD rotation images, thin slices scans | θmax = 25.1°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 7061 measured reflections | |
| 2222 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2222 reflections | (Δ/σ)max = 0.001 |
| 112 parameters | Δρmax = 0.45 e Å−3 |
| 0 restraints | Δρmin = −0.47 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| I2 | 0.23583 (2) | 0.148350 (12) | 0.326494 (15) | 0.01269 (6) | |
| I1 | 0.19816 (3) | −0.006510 (12) | 0.171029 (17) | 0.01684 (6) | |
| I3 | 0.25836 (3) | 0.297933 (14) | 0.474053 (18) | 0.02126 (6) | |
| N2 | 0.7383 (3) | 0.17050 (16) | 0.3419 (2) | 0.0144 (5) | |
| O1 | 0.8099 (3) | 0.15052 (14) | 0.09130 (18) | 0.0177 (5) | |
| H1 | 0.9119 | 0.1286 | 0.0833 | 0.027* | |
| N1 | 0.7438 (3) | 0.03209 (16) | 0.3568 (2) | 0.0141 (5) | |
| C2 | 0.7275 (4) | 0.09763 (19) | 0.2795 (3) | 0.0132 (6) | |
| C5 | 0.7344 (4) | −0.0598 (2) | 0.3266 (3) | 0.0209 (7) | |
| H5A | 0.61 | −0.0738 | 0.292 | 0.031* | |
| H5B | 0.7643 | −0.0933 | 0.3972 | 0.031* | |
| H5C | 0.8227 | −0.0723 | 0.2707 | 0.031* | |
| C6 | 0.7239 (4) | 0.2584 (2) | 0.2943 (3) | 0.0196 (7) | |
| H6A | 0.8421 | 0.2751 | 0.2686 | 0.029* | |
| H6B | 0.6918 | 0.2971 | 0.3551 | 0.029* | |
| H6C | 0.6285 | 0.2605 | 0.2282 | 0.029* | |
| C3 | 0.7663 (4) | 0.0651 (2) | 0.4703 (3) | 0.0195 (7) | |
| H3 | 0.7811 | 0.0336 | 0.5405 | 0.023* | |
| C4 | 0.7630 (4) | 0.1512 (2) | 0.4610 (3) | 0.0171 (7) | |
| H4 | 0.7751 | 0.1904 | 0.5234 | 0.021* | |
| C1 | 0.6972 (4) | 0.0911 (2) | 0.1468 (3) | 0.0160 (6) | |
| H1A | 0.7269 | 0.0332 | 0.1228 | 0.019* | |
| H1B | 0.566 | 0.1018 | 0.1204 | 0.019* |
| I2 | 0.01199 (10) | 0.01601 (11) | 0.01018 (10) | −0.00047 (7) | 0.00176 (7) | 0.00073 (7) |
| I1 | 0.02125 (11) | 0.01258 (11) | 0.01685 (11) | −0.00009 (8) | 0.00283 (8) | −0.00207 (8) |
| I3 | 0.02175 (11) | 0.02351 (12) | 0.01884 (12) | −0.00312 (8) | 0.00360 (8) | −0.00943 (8) |
| N2 | 0.0138 (12) | 0.0121 (13) | 0.0176 (14) | 0.0021 (10) | 0.0039 (10) | 0.0011 (11) |
| O1 | 0.0196 (10) | 0.0200 (12) | 0.0144 (11) | −0.0001 (9) | 0.0058 (8) | 0.0043 (9) |
| N1 | 0.0139 (12) | 0.0159 (13) | 0.0122 (12) | −0.0006 (10) | 0.0008 (9) | 0.0034 (11) |
| C2 | 0.0075 (13) | 0.0149 (15) | 0.0172 (15) | 0.0021 (11) | 0.0017 (11) | 0.0017 (12) |
| C5 | 0.0276 (17) | 0.0114 (16) | 0.0234 (17) | 0.0011 (13) | 0.0022 (13) | 0.0032 (13) |
| C6 | 0.0235 (16) | 0.0124 (16) | 0.0239 (17) | 0.0016 (13) | 0.0075 (13) | 0.0029 (13) |
| C3 | 0.0193 (15) | 0.0275 (19) | 0.0117 (15) | 0.0002 (13) | 0.0021 (12) | 0.0025 (13) |
| C4 | 0.0182 (15) | 0.0213 (17) | 0.0127 (15) | −0.0006 (13) | 0.0054 (12) | −0.0039 (13) |
| C1 | 0.0158 (14) | 0.0176 (16) | 0.0141 (15) | −0.0007 (12) | −0.0004 (11) | 0.0042 (13) |
| I2—I3 | 2.8594 (4) | C5—H5A | 0.96 |
| I2—I1 | 2.9792 (4) | C5—H5B | 0.96 |
| N2—C2 | 1.334 (4) | C5—H5C | 0.96 |
| N2—C4 | 1.374 (4) | C6—H6A | 0.96 |
| N2—C6 | 1.470 (4) | C6—H6B | 0.96 |
| O1—C1 | 1.417 (3) | C6—H6C | 0.96 |
| O1—H1 | 0.82 | C3—C4 | 1.344 (5) |
| N1—C2 | 1.341 (4) | C3—H3 | 0.93 |
| N1—C3 | 1.377 (4) | C4—H4 | 0.93 |
| N1—C5 | 1.470 (4) | C1—H1A | 0.97 |
| C2—C1 | 1.499 (4) | C1—H1B | 0.97 |
| I3—I2—I1 | 178.026 (8) | N2—C6—H6B | 109.5 |
| C2—N2—C4 | 109.2 (3) | H6A—C6—H6B | 109.5 |
| C2—N2—C6 | 126.8 (3) | N2—C6—H6C | 109.5 |
| C4—N2—C6 | 124.0 (3) | H6A—C6—H6C | 109.5 |
| C1—O1—H1 | 109.5 | H6B—C6—H6C | 109.5 |
| C2—N1—C3 | 108.6 (3) | C4—C3—N1 | 107.4 (3) |
| C2—N1—C5 | 126.1 (3) | C4—C3—H3 | 126.3 |
| C3—N1—C5 | 125.3 (3) | N1—C3—H3 | 126.3 |
| N2—C2—N1 | 107.7 (3) | C3—C4—N2 | 107.1 (3) |
| N2—C2—C1 | 125.7 (3) | C3—C4—H4 | 126.4 |
| N1—C2—C1 | 126.6 (3) | N2—C4—H4 | 126.4 |
| N1—C5—H5A | 109.5 | O1—C1—C2 | 111.7 (2) |
| N1—C5—H5B | 109.5 | O1—C1—H1A | 109.3 |
| H5A—C5—H5B | 109.5 | C2—C1—H1A | 109.3 |
| N1—C5—H5C | 109.5 | O1—C1—H1B | 109.3 |
| H5A—C5—H5C | 109.5 | C2—C1—H1B | 109.3 |
| H5B—C5—H5C | 109.5 | H1A—C1—H1B | 107.9 |
| N2—C6—H6A | 109.5 | ||
| C4—N2—C2—N1 | 0.4 (3) | C2—N1—C3—C4 | 0.2 (3) |
| C6—N2—C2—N1 | −178.8 (2) | C5—N1—C3—C4 | −178.4 (3) |
| C4—N2—C2—C1 | 178.8 (3) | N1—C3—C4—N2 | 0.1 (3) |
| C6—N2—C2—C1 | −0.4 (4) | C2—N2—C4—C3 | −0.3 (3) |
| C3—N1—C2—N2 | −0.4 (3) | C6—N2—C4—C3 | 179.0 (3) |
| C5—N1—C2—N2 | 178.2 (2) | N2—C2—C1—O1 | 44.3 (4) |
| C3—N1—C2—C1 | −178.7 (3) | N1—C2—C1—O1 | −137.6 (3) |
| C5—N1—C2—C1 | −0.2 (4) |
| H··· | ||||
| O1—H1···I1i | 0.82 | 3.03 | 3.741 (2) | 146 |
| C1—H1 | 0.97 | 3.05 | 3.924 (3) | 151 |
| C4—H4···O1iii | 0.93 | 2.60 | 3.421 (4) | 148 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯I1i | 0.82 | 3.03 | 3.741 (2) | 146 |
| C1—H1 | 0.97 | 3.05 | 3.924 (3) | 151 |
| C4—H4⋯O1iii | 0.93 | 2.60 | 3.421 (4) | 148 |
Symmetry codes: (i) ; (ii) ; (iii) .