| Literature DB >> 24427061 |
Mohamed El Hadi Said1, Sofiane Bouacida1, Hocine Merazig1, Ali Belfaitah2, Aissa Chibani1, Abdelmalek Bouraiou2.
Abstract
In the cation of the title compound, C10H13N2O(+)·I(-), all non-H atoms, with the exception of the O atom, are essentially coplanar, with a maximum deviation of 0.04 (1) Å. In the crystal, the cations and anions are arranged in layers parallel to (100). The cations are connected to the anions via an O-H⋯I hydrogen bond and there are significant π-π stacking inter-actions between cation layers, with centroid-centroid distances in the range 3.606 (5)-3.630 (5) Å. A weak intra-molecular C-H⋯O hydrogen bond is also observed. The crystal studied was an inversion twin with refined components of 0.52 (5) and 0.48 (5).Entities:
Year: 2013 PMID: 24427061 PMCID: PMC3884380 DOI: 10.1107/S1600536813022307
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H13N2O+·I− | |
| Orthorhombic, | Mo |
| Hall symbol: P -2bc 2a | Cell parameters from 4274 reflections |
| θ = 2.4–34.0° | |
| µ = 2.81 mm−1 | |
| Cube, colorless | |
| 0.14 × 0.13 × 0.12 mm |
| Bruker APEXII CCD diffractometer | 3243 reflections with |
| Graphite monochromator | |
| CCD rotation images, thin slices scans | θmax = 34.2°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 10018 measured reflections | |
| 4002 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.003 | |
| 4002 reflections | Δρmax = 1.34 e Å−3 |
| 131 parameters | Δρmin = −0.72 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 1518 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.48 (5) |
| Geometry. Bond distances, angles |
| Refinement. Refinement of |
| O1 | 1.0638 (4) | 0.0386 (3) | 0.05918 (17) | 0.0303 (8) | |
| N1 | 0.9055 (15) | 0.3459 (2) | 0.11990 (13) | 0.0203 (5) | |
| N2 | 0.9033 (12) | 0.2982 (2) | −0.00606 (12) | 0.0168 (5) | |
| C1 | 0.893 (2) | 0.1018 (3) | 0.0837 (2) | 0.0284 (9) | |
| C2 | 0.9025 (18) | 0.2473 (2) | 0.06700 (14) | 0.0192 (5) | |
| C3 | 0.9014 (18) | 0.4343 (2) | −0.00046 (14) | 0.0165 (5) | |
| C4 | 0.9022 (15) | 0.4649 (2) | 0.07953 (15) | 0.0179 (6) | |
| C5 | 0.9046 (16) | 0.2214 (3) | −0.07961 (15) | 0.0226 (7) | |
| C6 | 0.893 (2) | 0.3340 (3) | 0.20631 (18) | 0.0326 (11) | |
| C7 | 0.901 (2) | 0.5947 (2) | 0.10657 (18) | 0.0239 (6) | |
| C8 | 0.9001 (18) | 0.6923 (2) | 0.0495 (2) | 0.0277 (7) | |
| C9 | 0.9004 (16) | 0.6620 (3) | −0.03096 (19) | 0.0255 (7) | |
| C10 | 0.9028 (14) | 0.5327 (2) | −0.05820 (16) | 0.0218 (6) | |
| I1 | 0.3999 (3) | 0.08238 (2) | 0.21526 (1) | 0.0330 (1) | |
| H1 | 1.15370 | 0.04750 | 0.09236 | 0.0454* | |
| H1A | 0.77590 | 0.06427 | 0.05712 | 0.0341* | |
| H1B | 0.87606 | 0.08812 | 0.13999 | 0.0341* | |
| H5A | 0.98363 | 0.14266 | −0.07223 | 0.0339* | |
| H5B | 0.76764 | 0.19799 | −0.09352 | 0.0339* | |
| H5C | 0.96352 | 0.27334 | −0.12114 | 0.0339* | |
| H6A | 0.83795 | 0.24932 | 0.21993 | 0.0487* | |
| H6B | 1.02677 | 0.34281 | 0.22861 | 0.0487* | |
| H6C | 0.80648 | 0.40223 | 0.22679 | 0.0487* | |
| H7 | 0.90136 | 0.61465 | 0.16017 | 0.0287* | |
| H8 | 0.89907 | 0.78024 | 0.06512 | 0.0333* | |
| H9 | 0.89902 | 0.73060 | −0.06745 | 0.0306* | |
| H10 | 0.90517 | 0.51273 | −0.11180 | 0.0262* |
| O1 | 0.0335 (14) | 0.0250 (11) | 0.0324 (14) | 0.0107 (11) | −0.0066 (12) | −0.0073 (10) |
| N1 | 0.0282 (11) | 0.0161 (8) | 0.0166 (9) | −0.002 (3) | 0.000 (4) | −0.0013 (7) |
| N2 | 0.0179 (9) | 0.0168 (8) | 0.0158 (9) | −0.011 (2) | 0.001 (3) | −0.0022 (7) |
| C1 | 0.045 (2) | 0.0144 (10) | 0.0258 (13) | 0.009 (3) | 0.004 (4) | 0.0015 (9) |
| C2 | 0.0215 (10) | 0.0150 (8) | 0.0210 (10) | 0.003 (3) | 0.003 (5) | −0.0004 (8) |
| C3 | 0.0142 (8) | 0.0155 (9) | 0.0197 (10) | −0.001 (3) | 0.001 (5) | −0.0004 (7) |
| C4 | 0.0179 (10) | 0.0152 (9) | 0.0206 (11) | 0.006 (3) | −0.003 (4) | −0.0020 (8) |
| C5 | 0.0248 (13) | 0.0236 (11) | 0.0194 (11) | −0.010 (3) | −0.003 (4) | −0.0061 (9) |
| C6 | 0.053 (3) | 0.0289 (12) | 0.0158 (12) | 0.003 (4) | −0.001 (4) | −0.0010 (9) |
| C7 | 0.0250 (11) | 0.0174 (9) | 0.0292 (13) | 0.005 (4) | 0.001 (6) | −0.0065 (9) |
| C8 | 0.0222 (11) | 0.0130 (9) | 0.0480 (17) | 0.000 (4) | −0.001 (6) | −0.0015 (10) |
| C9 | 0.0183 (11) | 0.0205 (10) | 0.0377 (15) | −0.008 (3) | −0.003 (5) | 0.0089 (10) |
| C10 | 0.0188 (10) | 0.0226 (10) | 0.0240 (12) | 0.002 (4) | −0.001 (5) | 0.0059 (9) |
| I1 | 0.0493 (1) | 0.0319 (1) | 0.0177 (1) | −0.0001 (3) | −0.0001 (4) | −0.0009 (1) |
| O1—C1 | 1.357 (11) | C9—C10 | 1.389 (4) |
| O1—H1 | 0.8200 | C1—H1A | 0.9700 |
| N1—C4 | 1.387 (3) | C1—H1B | 0.9700 |
| N1—C6 | 1.471 (4) | C5—H5A | 0.9600 |
| N1—C2 | 1.342 (3) | C5—H5B | 0.9600 |
| N2—C3 | 1.383 (3) | C5—H5C | 0.9600 |
| N2—C5 | 1.469 (3) | C6—H6A | 0.9600 |
| N2—C2 | 1.341 (3) | C6—H6B | 0.9600 |
| C1—C2 | 1.503 (4) | C6—H6C | 0.9600 |
| C3—C10 | 1.397 (3) | C7—H7 | 0.9300 |
| C3—C4 | 1.390 (3) | C8—H8 | 0.9300 |
| C4—C7 | 1.393 (3) | C9—H9 | 0.9300 |
| C7—C8 | 1.383 (4) | C10—H10 | 0.9300 |
| C8—C9 | 1.397 (5) | ||
| C1—O1—H1 | 109.00 | C2—C1—H1A | 109.00 |
| C2—N1—C4 | 108.6 (2) | C2—C1—H1B | 109.00 |
| C2—N1—C6 | 127.0 (2) | H1A—C1—H1B | 108.00 |
| C4—N1—C6 | 124.1 (2) | N2—C5—H5A | 109.00 |
| C2—N2—C3 | 108.69 (19) | N2—C5—H5B | 109.00 |
| C2—N2—C5 | 125.4 (2) | N2—C5—H5C | 109.00 |
| C3—N2—C5 | 125.9 (2) | H5A—C5—H5B | 109.00 |
| O1—C1—C2 | 111.8 (8) | H5A—C5—H5C | 109.00 |
| N1—C2—C1 | 127.3 (2) | H5B—C5—H5C | 109.00 |
| N2—C2—C1 | 123.5 (2) | N1—C6—H6A | 109.00 |
| N1—C2—N2 | 109.24 (19) | N1—C6—H6B | 109.00 |
| N2—C3—C10 | 131.6 (2) | N1—C6—H6C | 109.00 |
| C4—C3—C10 | 121.5 (2) | H6A—C6—H6B | 109.00 |
| N2—C3—C4 | 106.82 (19) | H6A—C6—H6C | 110.00 |
| N1—C4—C7 | 131.3 (2) | H6B—C6—H6C | 109.00 |
| C3—C4—C7 | 122.1 (2) | C4—C7—H7 | 122.00 |
| N1—C4—C3 | 106.66 (19) | C8—C7—H7 | 122.00 |
| C4—C7—C8 | 116.5 (3) | C7—C8—H8 | 119.00 |
| C7—C8—C9 | 121.6 (2) | C9—C8—H8 | 119.00 |
| C8—C9—C10 | 122.1 (3) | C8—C9—H9 | 119.00 |
| C3—C10—C9 | 116.2 (2) | C10—C9—H9 | 119.00 |
| O1—C1—H1A | 109.00 | C3—C10—H10 | 122.00 |
| O1—C1—H1B | 109.00 | C9—C10—H10 | 122.00 |
| C2—N1—C4—C7 | 179.2 (12) | C3—N2—C2—C1 | 176.7 (11) |
| C6—N1—C4—C7 | 4.8 (19) | O1—C1—C2—N2 | 66.5 (13) |
| C4—N1—C2—N2 | 1.8 (13) | O1—C1—C2—N1 | −115.6 (11) |
| C6—N1—C2—N2 | 175.9 (10) | N2—C3—C10—C9 | −179.9 (11) |
| C4—N1—C2—C1 | −176.4 (11) | C4—C3—C10—C9 | −1.4 (15) |
| C6—N1—C2—C1 | −2 (2) | C10—C3—C4—C7 | 1.1 (17) |
| C6—N1—C4—C3 | −175.6 (10) | N2—C3—C4—N1 | 0.3 (12) |
| C2—N1—C4—C3 | −1.2 (12) | N2—C3—C4—C7 | 179.9 (10) |
| C5—N2—C2—N1 | 178.8 (9) | C10—C3—C4—N1 | −178.6 (10) |
| C5—N2—C2—C1 | −3.0 (17) | N1—C4—C7—C8 | 179.2 (11) |
| C3—N2—C2—N1 | −1.6 (13) | C3—C4—C7—C8 | −0.4 (17) |
| C5—N2—C3—C4 | −179.6 (9) | C4—C7—C8—C9 | 0.0 (18) |
| C2—N2—C3—C10 | 179.5 (12) | C7—C8—C9—C10 | −0.4 (18) |
| C2—N2—C3—C4 | 0.8 (12) | C8—C9—C10—C3 | 1.1 (15) |
| C5—N2—C3—C10 | −0.9 (18) |
| H··· | ||||
| O1—H1···I1i | 0.8200 | 2.6600 | 3.473 (3) | 171.00 |
| C5—H5 | 0.9600 | 2.5200 | 3.170 (5) | 125.00 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯I1i | 0.82 | 2.66 | 3.473 (3) | 171 |
| C5—H5 | 0.96 | 2.52 | 3.170 (5) | 125 |
Symmetry code: (i) .