| Literature DB >> 22087180 |
Liming Wu1, Lin Chen, Lin Zhou, Haiyang Xie, Bajin Wei, Shengyong Yin, Yufu Ye, Weijia Fang, Shusen Zheng.
Abstract
BACKGROUND: There is growing evidence suggesting that interleukin-18 (IL-18) plays a crucial role in viral clearance and disease pathogenesis, and that single nucleotide polymorphisms (SNPs) within the gene may influence its production.Entities:
Keywords: Genetic polymorphism; Hepatitis; Interleukin-18; Recurrence; Transplantation
Year: 2011 PMID: 22087180 PMCID: PMC3212796
Source DB: PubMed Journal: Hepat Mon ISSN: 1735-143X Impact factor: 0.660
Primers for polymerase chain reaction and sequencing of -137G/C and -607C/A in IL-18
| Forward: 5’CCCCTTCCTCCCAAGCTCAATA 3’ Reverse: 5’AGGTCAGTCTTTGCTATCATTCCAG 3’ | 5’TTTTTTTTTTTTTTTTTTTTTTTCCCC-AACTTTTACGGAAGAAAA 3’ | |
| Forward: 5’CAGGTTTTGGAAGGCACAGAGC 3’ Reverse: 5’AGGCTCTTTCCTAGGGCAATGG 3’ | 5’TTTTTTTTTTTTTTTTTTTTTTCTG-TTGCAGAAAGTGTAAAAATTATTA 3’ |
The distribution of genotypes and the allelic frequencies in the -137G/C and -607C/A of IL-18 in HBV recurrence patients and non recurrence control subjects
| 0.529 | 0.252 | |||||||
| C-C | 2 (1.8%) | 0 (0%) | C | 26 (12%) | 1 (4.2%) | |||
| C-G | 22 (20.2%) | 1 (8.3%) | _ | _ | _ | |||
| G-G | 85 (80%) | 11 (91.7%) | G | 192 (88%) | 23 (95.8%) | |||
| 0.237 | 0.758 | |||||||
| C-C | 37 (34%) | 3 (25%) | C | 120 (55%) | 14 (58.3%) | |||
| C-A | 46 (42.2%) | 8 (66.7%) | _ | _ | _ | |||
| A-A | 26 (23.8%) | 1 (8.3%) | T | 98 (45%) | 10 (41.7%) | |||
The models inheritance for -137G/C and -607C/A in HBV recurrence patients and nonrecurrence control subjects
| 0.44 | 82.6 | 91 | ||||
| 85 (78%) | 11 (91.7%) | 1.00 | ||||
| 22 (20.2%) | 1 (8.3%) | 0.35 (0.04–2.87) | ||||
| 2 (1.8%) | 0 (0%) | 0.00 (0.00–NA) | ||||
| 0.22 | 80.7 | 86.3 | ||||
| 85 (78%) | 11 (91.7%) | 1.00 | ||||
| 24 (22%) | 1 (8.3%) | 0.32 (0.04–2.62) | ||||
| 0.52 | 81.8 | 87.4 | ||||
| 107 (98.2%) | 12 (100%) | 1.00 | ||||
| 2 (1.8%) | 0 (0%) | 0.00 (0.00–NA) | ||||
| 0.28 | 81.1 | 86.7 | ||||
| 87 (79.8%) | 11 (91.7%) | 1.00 | ||||
| 22 (20.2%) | 1 (8.3%) | 0.36 (0.04–2.93) | ||||
| — | — | 0.33 (0.04–2.52) | 0.21 | 80.6 | 86.2 | |
| 0.22 | 81.2 | 89.6 | ||||
| 37 (33.9%) | 3 (25%) | 1.00 | ||||
| 46 (42.2%) | 8 (66.7%) | 2.14 (0.53–8.66) | ||||
| 26 (23.9%) | 1 (8.3%) | 0.47 (0.05–4.82) | ||||
| 0.52 | 81.8 | 87.4 | ||||
| 37 (33.9%) | 3 (25%) | 1.00 | ||||
| 72 (66.1%) | 9 (75%) | 1.54 (0.39–6.04) | ||||
| 0.18 | 80.4 | 86 | ||||
| 83 (76.2%) | 11 (91.7%) | 1.00 | ||||
| 26 (23.9%) | 1 (8.3%) | 0.29 (0.04–2.36) | ||||
| 0.11 | 79.6 | 85.2 | ||||
| 63 (57.8%) | 4 (33.3%) | 1.00 | ||||
| 46 (42.2%) | 8 (66.7%) | 2.74 (0.78–9.65) | ||||
| — | — | 0.88 (0.39–2.00) | 0.77 | 82.1 | 87.7 |
a Odds ratio
b Confidence Interval
c Akaike’s information criterion
d Bayesian information criterion
The association between haplotype and HBV recurrence after liver transplantation
| G | C | 0.5233 | 1 | — | |
| G | A | 0.365 | 1.10 (0.48–2.53) | 0.82 | |
| - | - | 0.1117 | 0.34 (0.04–2.71) | 0.31 |
a Global haplotype association P value: 0.44
b Odds ratio
c Confidence intervals